Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:37415359-37421376[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 9.3e-08 4.8e-06 27.5 1.0 1 23 76 98 76 98 0.99

2 24 0.014 0.71 11.2 0.7 1 23 104 126 104 126 0.98

3 24 5.4e-05 0.0028 18.8 1.3 1 23 132 154 132 154 0.97

4 24 5 2.6e+02 3.1 9.0 1 23 160 182 160 182 0.98

5 24 2.2e-05 0.0012 20.0 0.7 1 23 188 210 188 210 0.99

6 24 0.088 4.6 8.7 0.6 3 23 218 238 217 238 0.98

7 24 0.0015 0.08 14.2 0.6 1 23 244 266 244 266 0.99

8 24 2.2 1.1e+02 4.3 0.1 1 12 272 283 272 286 0.86

9 24 0.0068 0.35 12.2 0.1 1 23 373 395 373 395 0.98

10 24 0.00061 0.032 15.5 1.8 1 23 420 443 420 443 0.97

11 24 0.0008 0.041 15.1 1.9 1 23 449 471 449 471 0.97

12 24 0.00078 0.041 15.1 1.4 1 23 477 499 477 499 0.97

13 24 0.00027 0.014 16.6 0.9 3 23 507 527 505 527 0.98

14 24 0.0027 0.14 13.4 2.2 3 23 535 555 533 555 0.97

15 24 0.00039 0.02 16.1 2.0 1 23 561 583 561 583 0.97

16 24 0.0059 0.31 12.4 1.1 2 23 665 686 664 686 0.97

17 24 0.00014 0.0072 17.5 4.3 1 23 692 714 692 714 0.99

18 24 0.00014 0.0074 17.4 4.2 1 23 720 742 720 742 0.98

19 24 7.8e-06 0.00041 21.4 1.8 1 23 748 770 748 770 0.98

20 24 0.11 5.9 8.3 6.1 1 23 776 798 776 798 0.98

21 24 0.057 2.9 9.3 3.6 3 23 806 826 804 826 0.98

22 24 2.3e-05 0.0012 20.0 2.3 1 23 832 854 832 854 0.99

23 24 2.1e-06 0.00011 23.2 3.5 1 23 860 882 860 882 0.98

24 24 0.0008 0.042 15.1 0.8 1 23 888 910 888 910 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	9.3e-08	4.8e-06	27.5	1.0	1	23	76	98	76	98	0.99
2	24	0.014	0.71	11.2	0.7	1	23	104	126	104	126	0.98
3	24	5.4e-05	0.0028	18.8	1.3	1	23	132	154	132	154	0.97
4	24	5	2.6e+02	3.1	9.0	1	23	160	182	160	182	0.98
5	24	2.2e-05	0.0012	20.0	0.7	1	23	188	210	188	210	0.99
6	24	0.088	4.6	8.7	0.6	3	23	218	238	217	238	0.98
7	24	0.0015	0.08	14.2	0.6	1	23	244	266	244	266	0.99
8	24	2.2	1.1e+02	4.3	0.1	1	12	272	283	272	286	0.86
9	24	0.0068	0.35	12.2	0.1	1	23	373	395	373	395	0.98
10	24	0.00061	0.032	15.5	1.8	1	23	420	443	420	443	0.97
11	24	0.0008	0.041	15.1	1.9	1	23	449	471	449	471	0.97
12	24	0.00078	0.041	15.1	1.4	1	23	477	499	477	499	0.97
13	24	0.00027	0.014	16.6	0.9	3	23	507	527	505	527	0.98
14	24	0.0027	0.14	13.4	2.2	3	23	535	555	533	555	0.97
15	24	0.00039	0.02	16.1	2.0	1	23	561	583	561	583	0.97
16	24	0.0059	0.31	12.4	1.1	2	23	665	686	664	686	0.97
17	24	0.00014	0.0072	17.5	4.3	1	23	692	714	692	714	0.99
18	24	0.00014	0.0074	17.4	4.2	1	23	720	742	720	742	0.98
19	24	7.8e-06	0.00041	21.4	1.8	1	23	748	770	748	770	0.98
20	24	0.11	5.9	8.3	6.1	1	23	776	798	776	798	0.98
21	24	0.057	2.9	9.3	3.6	3	23	806	826	804	826	0.98
22	24	2.3e-05	0.0012	20.0	2.3	1	23	832	854	832	854	0.99
23	24	2.1e-06	0.00011	23.2	3.5	1	23	860	882	860	882	0.98
24	24	0.0008	0.042	15.1	0.8	1	23	888	910	888	910	0.98

Sequence Information

Coding Sequence: ATGATGCCAGGTGTGGGTTGCTCGGGGGTTCCGAAGATGTATGCTCGTTCAAATTGGGAAACACCACTTGAGGCAAAAAGCTTCCTCCACGTTAAAACagaagaggaagaagaagcAGGAATGGATATTAAATTGGAAGATTTGCATCATTCCatcgacattaaagaagaGGCTCCAATACTAAAACGAGAGGGAGAATGCAAACCATCCGCCAATGGGAACGCGTTCaggtgtgaaatttgtgattattCTTTCACGcagaaaggaaatttaaacATTCACTTAAGAAGACATACGGGCGAGCGACCGTTTACCTGTGATAGTTGTGAATTTAATAGTGTACTCAAGGTGGACTTACAACGTCATTTGAGGACGCATTCGGGCGCGAAACCGCATATGTGTgatatttgtgattataaaactGCGCAGAgaggaaatttaaaacgtCACGTTATGACTCATACGGGGGAGACACGGTTCAGTTGCCAGACTTGTGACTTTAAATGTGCACACAAAGTTAGCTTGCAATGTCATTTAAGGAAGCATTCGGGGGAAAAACCGTATGAGTGCAAtgtttgtgattttaaaactgGACGGAAATCGAATTTACTAGTCCATTTAAGAACACATCGGGGCGCGAAACCGTTTTGGTGTGAAAGTTGTGATTATAAATCTGGAGACAAAAGACGTTTACAAATTCACCTGAGGACACATACGGACGAGAAACCGTATACGTGTGCAATTTGTGAGTTTAAAACTGCCCAAAAGGAaggtttaaaaatgcatttgaGAAAACACACCAGCCAGAAGCCGTTCAGATGTGAAATTTGCGATTATTCCTtgAATCGAACGGCTATGGAGGAGGCTGTGGTTTTAGAGGGCTATCACGAAGTAAAAGTGGAACCTAAGGAAGACCCCACACCTATTGACCTTCATGAAAATGCAGAAATTGGCAAACCATTTTTCGCCGATGTGCCAAAAGAatactacaaaataaaagaagaaccGGTGGAAAAAAAGGAGTTCAACTTGGAGGACCTGCACCATTCGATTATCATTAAAGAAGACACGCCTTCGGAGCTAATTACAGAAGTGGAATCACCATCGTGTCGACAATTCGAATGCGAGGTGTGCAACGTTAAATTTCCTCTTAAATCGGAAGTTTTAAATCATACGAGAGCCCACACCGGCGCTGCAATTTGTGAACTCCACATTACCACGAGAGACGATTTAAAAGTTCCCTTCGGCGAGAAATTATTCTCGTGTGAAATATGCGTCTTGAAGTTTTCGACCAAACAAACTTTGAAATACCAcatcatgagatttcataccGAGGACAAGCCCTTCGCTTGTGGAACCTGTTCGTATAAATGTTCGAATAATCCAGATTTGAAACGGCACATGGTAACTCATGTCAGCAAAAAACCGTATGCCTGTGCAATGTGCGACTATAAGAGTATTCGGAAGGAGCATTTGAGAAGTCATTTGAAAGTTCATACGGGTGAAAAACCGTTTGGTTGTgatatttgtgattataaaactACAACGAAGCGAAATTTGAACTACCACATGGTGACTCATACCGGGGAGAAACCTTTTGGCTGTGCGATGTGTGATTTTAAAACCGCAAGTAAATCGCATTTGAAGGAACATTTAAAAACCCACACCGGTGAAAAGCCCTTTGCCTGTGAAATATGTGCCTACAAATGTTCTTTCAAAGGAAATCTGAAACGGCATATGGTAACTCACTCCAGGATTATTTACCACGATATGTACAAGATGGTATCTTTAGAAGAATTACCGACTGCCAGAAGTgcaattgatattaaaaaagaagataCTTCAATTAACGAGGAATTAGAACAGGGCAGCcaagatattaaaattgaacatatGAAAGAAGAGATTGACGATTTACATCACTCCATtgacattaaagaagaaatttcaCTTGAAGAACCCACAAAAATTCACAACGGCAAGAAATTGTTGGTTTGCAACATTTGCGACTACGGATGTTCTCAGAaggcaatttttaataatcatttaagAACGCACACCGGGGAGAAACCGTTCAAGTGTAATatttgtgattgcaaattttctcaAACGGGAACTCTGAGCTATCATTTACGAACTCACACCGGCGAAAAACCATTCGAATGCAATAgctgcgattataaatgttctaaAAAAGGCAATTTGAAAAGACATTTACTTACTCATACCAACAATAAGCCGTTTGAGTGTACCCTTTGCGGTCataaattttcccaaaaagcaagtttaaataatcatttgcAAATTCACACCGGAGAAAAACCATTTGAGTGCTACGTTTGccattttaaatgttctctTAAAAAATGGTTAAAGAATCATTTACTAACCCATACTAGCCAGAAACCATTTGGGTGCAACTTTTGCGCTTATAAAAGTTGCCGAAAAGATGATTTCAAAGTTCATTTAAGAACACATACCGGAGAGAAACCATTCCAGTGCAACATCTGCAATTATAAATCTGCCCGAAGACTTAATTTGAAGAGACATTTACGAACCCACAGCGGACAGAAACCGTTCGAGTGCACagtttgcgattataaatattCTCATAAAAGTTCCTTGAACAGGCACATACAAACTCATTCCAGTATTCAGCCGTTCGAGTGCAGTGTTTGCGACTACAAATCTTGGCGGAAAGGAAATCTGAATCGTCATTTACAAACTCATACCAATCGGAATagtatttaa
Protein Sequence: MMPGVGCSGVPKMYARSNWETPLEAKSFLHVKTEEEEEAGMDIKLEDLHHSIDIKEEAPILKREGECKPSANGNAFRCEICDYSFTQKGNLNIHLRRHTGERPFTCDSCEFNSVLKVDLQRHLRTHSGAKPHMCDICDYKTAQRGNLKRHVMTHTGETRFSCQTCDFKCAHKVSLQCHLRKHSGEKPYECNVCDFKTGRKSNLLVHLRTHRGAKPFWCESCDYKSGDKRRLQIHLRTHTDEKPYTCAICEFKTAQKEGLKMHLRKHTSQKPFRCEICDYSLNRTAMEEAVVLEGYHEVKVEPKEDPTPIDLHENAEIGKPFFADVPKEYYKIKEEPVEKKEFNLEDLHHSIIIKEDTPSELITEVESPSCRQFECEVCNVKFPLKSEVLNHTRAHTGAAICELHITTRDDLKVPFGEKLFSCEICVLKFSTKQTLKYHIMRFHTEDKPFACGTCSYKCSNNPDLKRHMVTHVSKKPYACAMCDYKSIRKEHLRSHLKVHTGEKPFGCDICDYKTTTKRNLNYHMVTHTGEKPFGCAMCDFKTASKSHLKEHLKTHTGEKPFACEICAYKCSFKGNLKRHMVTHSRIIYHDMYKMVSLEELPTARSAIDIKKEDTSINEELEQGSQDIKIEHMKEEIDDLHHSIDIKEEISLEEPTKIHNGKKLLVCNICDYGCSQKAIFNNHLRTHTGEKPFKCNICDCKFSQTGTLSYHLRTHTGEKPFECNSCDYKCSKKGNLKRHLLTHTNNKPFECTLCGHKFSQKASLNNHLQIHTGEKPFECYVCHFKCSLKKWLKNHLLTHTSQKPFGCNFCAYKSCRKDDFKVHLRTHTGEKPFQCNICNYKSARRLNLKRHLRTHSGQKPFECTVCDYKYSHKSSLNRHIQTHSSIQPFECSVCDYKSWRKGNLNRHLQTHTNRNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -