Clat022666.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cantharis lateralis
Gene Symbol
-
Assembly
GCA_963170105.1
Location
OY720628.1:37407129-37414012[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 1.3e-05 0.00066 20.7 5.0 1 23 82 104 82 104 0.99
2 36 0.0011 0.059 14.6 2.3 1 23 110 132 110 132 0.99
3 36 0.0021 0.11 13.8 0.2 1 23 138 160 138 160 0.97
4 36 0.16 8.5 7.8 5.0 1 23 166 188 166 189 0.96
5 36 0.094 4.9 8.6 3.1 1 23 195 217 195 217 0.97
6 36 0.00011 0.006 17.7 0.1 1 23 223 245 223 245 0.98
7 36 0.00013 0.0066 17.6 1.8 1 23 319 341 319 341 0.98
8 36 0.022 1.2 10.5 0.3 1 23 347 369 347 369 0.98
9 36 2.7e-05 0.0014 19.7 3.6 1 23 375 397 375 397 0.99
10 36 0.83 43 5.6 1.4 1 23 403 425 403 425 0.98
11 36 0.0017 0.09 14.0 1.3 1 23 431 453 431 453 0.97
12 36 0.0048 0.25 12.6 1.0 1 23 459 482 459 482 0.96
13 36 0.0018 0.091 14.0 0.6 1 23 488 510 488 510 0.97
14 36 0.062 3.2 9.1 7.0 1 23 516 538 516 538 0.98
15 36 0.014 0.71 11.2 1.2 1 23 544 566 544 566 0.97
16 36 0.16 8.4 7.8 6.0 1 23 572 595 572 595 0.98
17 36 0.00025 0.013 16.7 5.1 1 23 601 623 601 623 0.97
18 36 0.011 0.56 11.5 0.7 2 23 663 684 662 684 0.96
19 36 0.032 1.7 10.1 0.4 1 23 690 712 690 712 0.97
20 36 0.001 0.052 14.8 0.4 1 23 718 740 718 740 0.98
21 36 0.0043 0.23 12.8 0.2 1 23 746 768 746 768 0.97
22 36 0.0022 0.11 13.7 2.3 1 23 774 796 774 796 0.99
23 36 3 1.5e+02 3.9 5.0 1 23 802 824 802 824 0.97
24 36 0.014 0.7 11.2 0.3 1 23 830 852 830 852 0.97
25 36 0.01 0.54 11.6 1.7 1 23 858 880 858 880 0.97
26 36 0.0046 0.24 12.7 0.4 1 22 886 907 886 907 0.94
27 36 0.52 27 6.2 4.9 2 23 986 1007 985 1007 0.97
28 36 0.0036 0.19 13.0 5.9 3 23 1015 1035 1013 1035 0.98
29 36 1.1e-06 5.9e-05 24.1 0.7 1 23 1041 1063 1041 1063 0.98
30 36 0.0039 0.2 12.9 0.2 1 23 1069 1091 1069 1091 0.97
31 36 0.0032 0.17 13.2 1.7 1 23 1097 1120 1097 1120 0.97
32 36 0.0013 0.069 14.4 2.5 1 23 1126 1148 1126 1148 0.99
33 36 2.8e-05 0.0014 19.7 3.7 1 23 1154 1176 1154 1176 0.98
34 36 0.00023 0.012 16.8 1.9 1 23 1182 1204 1182 1204 0.96
35 36 2.3e-05 0.0012 19.9 0.8 1 23 1210 1232 1210 1232 0.99
36 36 0.0066 0.34 12.2 1.5 1 23 1238 1260 1238 1260 0.95

Sequence Information

Coding Sequence
ATGTTTTCGATCGGAAAGGTGAAAGATCGGGAAAAGCGGTTTGTTTATCCCAAAGACGCTTTGGACGGTGGAGCTCACCTGGAAGCTCCATGCTATTCGAATagtttctttcaaattaagacGGAGGAGGATGAACAAATCGAAGTCAAGTTGGAAGATCTGCATCATTCCGTTGATATAAAAGAAGAAACGTCTGCTACCGAATGGACCGAAGAATGCACATCGGAGACAAGAGGGAAGCAGTTTACGTGTGAATATTGCGATTACAGTTGTGCACGTAAATCACATTTAGAAAGTCACGTTAGAACTCATACTGGTGAGAAACCATACacgtgtgaaatttgtgattataaaagCGCGTACAAAGGCCACATAAAAACTCATTTGAGAACTCACACCGGCGAGAAGCCATTTGCATGCGAATTTTGTGATTATCGCGGTGTATACAAAGCCGACTTGACAATTCATCTAAGAACTCATACCGGTGAGAAACCGTTTACCTGCGAATTTTGTGACTATAAATGCGCACGTAAAGAACGCGTAAAAATGCACGTAAGAATTCACCATACCGGCGAGAAATTGTTCGCATGCGATATGTGCGACTACAAAAGTGGACACAAAGGACACTTCACAATTCACTCAAGAATCCATACTGGTGAAAAACCCTTTACGTGCGAAATTTGTGGCAGCAAATTTGCAGCCAGTGGCGGTTTAAAAAGGCATCTAAGAATTCACACGGGGGAAAAACCATTTgcGACGATGAGTTATGATGAAGTTTTAATGCTGGATTTATTGCAGGAAACTCCCGACTATTCGGATAGTTGCTCACAAATTAAGACGGAAGAACAAATGGACTTTAAGTTGGAAGATTTGCATCACTCGATtgacattaaagaagaaaatccCGAACCTGAACTGGATGGACAATGGACATCGGAAGCAAGTGCGAAATGGTTTACGTGTGAATTTTGTGGATACAAAACTGCCCGGAAGGGACATTTAAATgtccatttaaaaatccacACTGGGGAGAAGCCGTTTCGATGTGATATTTGTGAGTATCGGGGCGGATCCAATAGGGCTTTGAAGCTGCATTTAAGTACTCACACTGGGGAGAAGCCGTATTCGTGCAAAATTTGCGGTTATAAAACTGCGCATAAAGGCCATTTAAATGTTCATTTGAGAACTCATACCGGTGAGAAATTATTTACGTGTGAATTTTGTGACTTCAAAAGTTCATTACGGGGACGTTTGGACACTCACACACGGATTCATACCGGTGAGAAATTTTTCGCATGTGGactttgcgattataaaagcGCAAAGAAGAAACTTTTGAAGTCTCATCAGCGAACTCACGATGCCGAGAAAGAATTCTCGTGTGAATTTTGTGACTACAAAActgcatataaaaaaaatttaaattcacatGTGATCCGGATTCATACCGGTACGAAGCAATTTGCttgtgaattttgtaattaccgAGGAGTATATAAATCCGATCTACGGGTTCACCTACGAAGTCACACCGGAGAGCAGCCGTTCTCCTGTaaattttgcgattttaaaagtgTGCATAAAGGACATTTTAATCTGCACTTGAGAACTCACACGGATGAGAAACCGTTTGCCTGTGAATTTTGCGATTACCGAGCTAGGTATAAGAGGTATTTAACCGTTCATTTAAGTACGCATACTGGTCAGAAACCGTTTAAATGCGATTTTTGCGACTATAAAGGTGCACATAGATCCTGTTTGTACGTTCACTTGAGGAAAAAACATACAGACGTGAAACCGTTTGCCTGCGAACATTGTGATTATAAAACCGCACACAAGGGACATTTGAACGTCCACATGCGATCCCATTCCGATGCGAAACCTTCTGCCGAGAAACCTTTAAAATCTACTGTCGGAGACGATGAAAATGAGtataaggaatttttaaacgCATACTCAAAAAATTACACTCCCGTGAAATTGCTTCCGTgtgaattttgtgattttaaagcTGCACACGAGAAACAGCTAAACGCCCATCTCCGAACCCATACTGGTGGACGGCCGTTTGcatgtaaattttgtgattttcgaGGTGTACTTAAAGGAGATTTGACGGTACATTTAAGACGGCATACCGGGGAAAAACCCTATGCGTGTGAATTTTGTGACTACAAAACCGCCCAGAAAGGAACTCTAAACGTTCACACTCGAATCCACACCGGGGAGAAACCGTTCGCCTGCGAATTGTGCGATTATCAAACCGGAACTAAGggagatttaaaaattcatttaagtACGCACACCGGGGACAAACCGTACGTATGTGAATTTTGTCCGTTTAAGACTGCTCGTAAGGGACATTTCAACGTCCATTTAAAAACTCACATGGATGCGAAGCCTTTCAGATGTAAGTTTTGTGATTTTCGAAGTAAATGCAATGAATCCTTAAAAGCGCACTTAACAAGTCACTCCGATGTGAAACCGTTTGCGTGTGAATTTTGTGATTATCGAGCTGCACTTAAAGGAGATTTAAAAACGCATTTAAGAAGCCATCCCGACGTGAAACCGTTTGCCTGTgaattttgtgattataaaaccGCACAGAAAGGACATTTCAACATTCACACCCAAATTCATACCGGCCAGAAACCGTATGCGTGTAACAACTGTGATTATAGAACTTCGTACAAAACAGACCTGAGGGTTCATCTAAGCACTCCTACCAGCGGAGAAACTCTTGCATGTGAATTATTGTGGGCGGTGTTGCGAAATTTGAAGTTTACCAAGAAAATGGATACTCCGTGCCAATCGCATATTAAGGTAGAAGAAGACGAAGTGGAAATCAAGTTGGAAGATTTGCATCATTCCatcgacattaaagaagaGGCTTCGATAGTAATAGAGCCTGAACTGGATAGACACTGGACTCCGGAAGTGAAAGAAAAACAGTTgacatgtaaattttgtggTTATAAATGTGCAtttaagaaagtttttaaaactcACTTGAGCACTCACAgcggcgagaaaccgtttggcTGCGagttttgtgattataaatgtgcCCGTAAGACCCACTTGAAGAGTCACTTAAGAACCCACACCGGCGAGAAGCCGTTTgtgtgtgaaatttgtggctttaaatttaaccaaaaagGAAGCTTAAAAATCCACTTACGAACTcacactggcgagaaaccatttgcaTGTGATTTTTGTGATTATCAGGGTGCATATAAAGGAGATTTGACGGTGcatttaagaactcatactggcgagaaaccgtaTCCGTGTGAATtctgtgattataaatgtgcTCGTAAGGAACGGTTAAAAATTCATGTCCGAATTCAGCATACCGGCGACAAATTGTTTACGTGCGAACTGTGCGATTATAAAAGTGGACACAAGGGGAACTTTACAATCCATTTGAGAACTCATACGGGGGAGCGACCGTTCACCTGCGACATTTGTGACCATACGTTTGCAAATAATGGTTGCCTGAAACggcatttaaaaatccattcaGGCGAGCGGCCGTTTACATGCGAAGTTTGCCACTATAAGTTTCCCGATAAGGGCAGTTTGAATAAACATTCGATAAGTCATACGGACCAGAAACCGTTTACGTGTGAATTGTGCGATTATAAAAGTGCTCGTAAggccaatttgaaaattcacttAAGGACCCATACCGGCCTGAAGCCGTTtgcttgtaaaatttgtgactaTCAGTGTACATCCAAAGGAAGCTTCAACATGCATTTAATCGGTCATGCCGACCAGAAATAG
Protein Sequence
MFSIGKVKDREKRFVYPKDALDGGAHLEAPCYSNSFFQIKTEEDEQIEVKLEDLHHSVDIKEETSATEWTEECTSETRGKQFTCEYCDYSCARKSHLESHVRTHTGEKPYTCEICDYKSAYKGHIKTHLRTHTGEKPFACEFCDYRGVYKADLTIHLRTHTGEKPFTCEFCDYKCARKERVKMHVRIHHTGEKLFACDMCDYKSGHKGHFTIHSRIHTGEKPFTCEICGSKFAASGGLKRHLRIHTGEKPFATMSYDEVLMLDLLQETPDYSDSCSQIKTEEQMDFKLEDLHHSIDIKEENPEPELDGQWTSEASAKWFTCEFCGYKTARKGHLNVHLKIHTGEKPFRCDICEYRGGSNRALKLHLSTHTGEKPYSCKICGYKTAHKGHLNVHLRTHTGEKLFTCEFCDFKSSLRGRLDTHTRIHTGEKFFACGLCDYKSAKKKLLKSHQRTHDAEKEFSCEFCDYKTAYKKNLNSHVIRIHTGTKQFACEFCNYRGVYKSDLRVHLRSHTGEQPFSCKFCDFKSVHKGHFNLHLRTHTDEKPFACEFCDYRARYKRYLTVHLSTHTGQKPFKCDFCDYKGAHRSCLYVHLRKKHTDVKPFACEHCDYKTAHKGHLNVHMRSHSDAKPSAEKPLKSTVGDDENEYKEFLNAYSKNYTPVKLLPCEFCDFKAAHEKQLNAHLRTHTGGRPFACKFCDFRGVLKGDLTVHLRRHTGEKPYACEFCDYKTAQKGTLNVHTRIHTGEKPFACELCDYQTGTKGDLKIHLSTHTGDKPYVCEFCPFKTARKGHFNVHLKTHMDAKPFRCKFCDFRSKCNESLKAHLTSHSDVKPFACEFCDYRAALKGDLKTHLRSHPDVKPFACEFCDYKTAQKGHFNIHTQIHTGQKPYACNNCDYRTSYKTDLRVHLSTPTSGETLACELLWAVLRNLKFTKKMDTPCQSHIKVEEDEVEIKLEDLHHSIDIKEEASIVIEPELDRHWTPEVKEKQLTCKFCGYKCAFKKVFKTHLSTHSGEKPFGCEFCDYKCARKTHLKSHLRTHTGEKPFVCEICGFKFNQKGSLKIHLRTHTGEKPFACDFCDYQGAYKGDLTVHLRTHTGEKPYPCEFCDYKCARKERLKIHVRIQHTGDKLFTCELCDYKSGHKGNFTIHLRTHTGERPFTCDICDHTFANNGCLKRHLKIHSGERPFTCEVCHYKFPDKGSLNKHSISHTDQKPFTCELCDYKSARKANLKIHLRTHTGLKPFACKICDYQCTSKGSFNMHLIGHADQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-