Clat022691.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cantharis lateralis
Gene Symbol
-
Assembly
GCA_963170105.1
Location
OY720628.1:37605443-37615353[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 0.034 1.8 9.9 3.5 1 23 297 317 297 317 0.88
2 41 2.3e-05 0.0012 19.9 2.2 1 23 323 345 323 345 0.98
3 41 1.5e-05 0.00076 20.6 0.7 1 23 351 373 351 373 0.98
4 41 2.3 1.2e+02 4.2 8.6 1 23 379 401 379 401 0.98
5 41 0.00063 0.033 15.4 3.9 2 23 408 429 407 429 0.97
6 41 6.8e-05 0.0035 18.5 2.0 1 23 435 457 435 457 0.98
7 41 4.3e-05 0.0022 19.1 2.9 1 23 463 485 463 485 0.98
8 41 5.5e-05 0.0029 18.7 1.7 1 23 491 513 491 513 0.98
9 41 0.23 12 7.3 5.3 1 23 576 598 576 598 0.98
10 41 4.5e-05 0.0024 19.0 1.7 1 23 604 626 604 626 0.97
11 41 0.01 0.53 11.6 1.4 1 23 632 654 632 654 0.98
12 41 0.33 17 6.8 3.2 1 23 660 682 660 682 0.95
13 41 0.00086 0.045 15.0 0.8 1 23 688 710 688 710 0.97
14 41 0.0083 0.43 11.9 3.1 1 23 716 738 716 738 0.99
15 41 0.00034 0.017 16.3 3.3 1 23 744 766 744 766 0.98
16 41 3.8e-05 0.002 19.3 0.8 1 23 772 794 772 794 0.98
17 41 5e-05 0.0026 18.9 2.3 1 23 800 822 800 822 0.99
18 41 0.95 49 5.4 6.1 1 23 878 900 878 900 0.99
19 41 0.0022 0.11 13.7 1.6 2 23 907 928 906 928 0.97
20 41 0.12 6.1 8.3 0.7 1 23 934 957 934 957 0.95
21 41 0.064 3.3 9.1 4.6 1 23 964 986 964 986 0.98
22 41 0.0069 0.36 12.1 1.7 1 23 992 1014 992 1014 0.98
23 41 0.066 3.4 9.1 1.4 1 23 1020 1043 1020 1043 0.97
24 41 1.4e-05 0.00075 20.6 2.8 1 23 1049 1071 1049 1071 0.99
25 41 0.56 29 6.1 2.8 1 23 1077 1099 1077 1099 0.97
26 41 0.00026 0.013 16.6 0.2 1 23 1105 1127 1105 1127 0.98
27 41 0.0017 0.087 14.1 0.3 1 23 1133 1155 1133 1155 0.92
28 41 1.2e-05 0.00063 20.8 1.2 1 23 1161 1183 1161 1183 0.98
29 41 0.0034 0.18 13.1 7.5 1 23 1189 1211 1189 1211 0.98
30 41 0.0019 0.1 13.9 2.7 1 23 1286 1308 1286 1308 0.99
31 41 0.0012 0.061 14.6 3.6 1 23 1314 1336 1314 1336 0.99
32 41 0.11 5.6 8.4 2.2 1 23 1342 1365 1342 1365 0.95
33 41 0.0012 0.062 14.5 2.6 1 23 1371 1393 1371 1393 0.98
34 41 0.098 5.1 8.5 2.8 1 23 1399 1421 1399 1421 0.99
35 41 0.00071 0.037 15.2 4.1 1 23 1427 1449 1427 1449 0.99
36 41 0.0058 0.3 12.4 0.3 1 23 1455 1477 1455 1477 0.94
37 41 2.4e-06 0.00013 23.0 1.9 1 23 1483 1505 1483 1505 0.99
38 41 0.0041 0.21 12.9 1.5 1 23 1511 1533 1511 1533 0.99
39 41 0.26 14 7.2 5.1 1 23 1539 1561 1539 1561 0.99
40 41 0.003 0.16 13.3 0.4 1 23 1567 1589 1567 1589 0.92
41 41 0.00038 0.019 16.1 3.1 1 23 1595 1617 1595 1617 0.99

Sequence Information

Coding Sequence
ATGGATAACACATCAAAAAAACATGTTAAGGAAAGCCGGGATGACCAACCAGATCTACCGAAATTGGGTCGGCCACGTAAATCGGCACCGACAAGAAAAACTGTTCAACGCATCCGGAAGTACAGCCAGCGAGTGAAAGAAAATCGAGATCGTGATTTAGAACAAAATCGTTTCCagaacaataatataaataccggattagaaaaatttacaccGGATGAAGACATGAATGTAAACAAGTTTGTTGACACCACAGCGAATACTTCAAATAATTCTGAAGTGGAAGATTTTAGCAAACGTATTAAAGTTGAAGATGAGGATATTGAGCTGGAATCCTTGCATCATTTCGTTGATATTAAAGAGGAGACTTCGATGGACGACTTCAAAGTGGATGAAGATTACGAACGCCAAATGCAGCTGGGAGTTCACGCAGAAACCCATTCCGCTTACTCCGCAACACTAAAAACCCCATCGGCCCCCGCAGCTGCTTTTATACCAAGGACGagaaatgaagaaaaaacTGACTCTAATGGAACTGCGGAAATAGATCTACAGATATTAGAAACGTTGAAATCAATGAACCAGGAAAAGAAGGAAGATATATCTTTCGGAAATTTAGTTATCGTTGAACTGAGTAAAATTGACAATCCTGCCAAAAAACgattagaaaaatttggcAAAGCTATTAAACCGGATGAGAACCTGGAAGACTTACGCAATTGCAGCCAATatattaaagttgaaaatgtgGATATCGAGCTGGAATCCTTGCACCATGCCATTGAAATTAAAGAAGAGCCTTCGATGAACGACGCCGGGATGGATCAAGATCGCGAACGCAAAGTGCAGCTTGGGGTTCATGCAGAAAGTCACACCGGTAGGAAGACGTTTGAGTGCAACATTTGCGGCTTCAAATGTTTTAGCAACTTGAATCGTCATTTACGAATTCACACCGGCGAAAAACCATTCGAATGTACAGTTTGCGGTTATAAATGTGCCCAAAAAGGAAATTTGCGAAAACATTTACAAAGTCACACCGGCGAAAAGCCTTTCGAGTGCGCAGTTTGCGGTTTATTTTTCACTCAAAACAGAAATTTGAAGTATCATTTACGAATTCACACCGGCAAGAAACCATTCGAGTGCACactttgcgattataaatgctATCAAAGGCATATTTTGCATCGACATTTACGATCTCATAGCGgcgataaatttttgaagtgcGCAGTGTGCGATTACGAATGCTCTCAAGAGCATAGCTTGAAACGGCACTTGCgaactcatactggcgagaaaccattcgAGTGTACAGTTTGCGGTTACAAATGTAATCAAAAGGGATATTTGCAAGAACACATACAAACTCATACTGGGGAAAAACCTTTCGAGTGTGCAGTTTGCGGCTACAAATTTTCCCACAAAAGATATTTACGGAGTCATTTGCTGACTCACACTAGTCAAAAACCGTTCGAGTGTaccatttgcgattataaatcttcTCGAAAACAGAATTTGAGAGAACATTTGCGAAATCATACCAACGGAAAACCGTTCGGGTGTACaGAAACTTCATGCCATTCAAGTAACTTGATCCAAATTAAGACGGAAGTGATGGAAGTCAAGTTGGAAGATTTGCATCATTGCatcgacattaaagaagaGATTGTAATTCCGGAAAGTAATCCGAACGTAGTTTGCAAACCAGATCCGATTAAGAAACAGTTCAGTTGTAGACTATGCGACTACAAATGTGCACGTAAGCAAAgactaaaaattcattttagaaGTCATACCGGCTACAAGCCGTTTGCGTGTGAAGTTTGCGGTTACAAATGTACAACGAACGCAGATCTGCAAAGACATTCCCGGACGCATACCGGTGACAAGCCTTTTGAGTGTGAACTTTGCGACTATAAATGTGCACAACGAGGAAGGTTAAGCATTCACGTAAGAAGGCACACCGGCAATAAACCATTTTTGTGTTcgatttgtgattataaaggTGCATGTAAGGGTCACTTGAAAATCCATCTGAGGACTCACAGTGGGGAGAAACCATATACTTGtataatttgcgattttaaaagcGCACGTAAAGATGATTTAAACAGACATTTAAGGACTCATACTGGGGAAAAACCGTTTCGATGTGATCTTTGTGACTATAAGTGTACCCAACGGGGAAGACTGAGCGTTCACGTAAAAACTCATGCCGGCCAGAAGCCGTATATGTGTGACATCTGCGAGTATAAATGTGCACGAAAGAGATATTTGAAGATCCATTTAAGGACCCATACGGGCGAGAGACCCTTTAGCTGTACAATTTGTGATTTCCAAAGTGCACGTCAGGATGACTTAAATCGACATTTAAGAACTCACACAGGGGAAAAACCATACACATGCGAACTTTGTGACTATCAAAGTTCGCGTaaacaaaacttgaaaactCACCTTAGAACGCACACGGGAGAGAAACCCTTCGAGTGTGAgGCAACTCCGTGCTGCTCTGATATCAAGACGGAGATCGAAGAAATAGAAGTCAAGTTGGAAGATTTGCATCACTCTGTTGATATTAAAGAGGAAATTTCAATTGTGGAATTTCAACTGCCGGAAGCCAGCCAGAAATCGTTTAAATGTGAAagttgtgattataaatgtgaGCATAAAGGAATTTTCGAAAGGCATCTACGAAAGCACACCGAGAAGATATCGTTGACTTGCGAAGTATGCGGGTACAAATGCAAACAGAAGTCAATTCTGAAAGTGCATTTAAGAATTCATACTGGTGATAAGCCGTTTCCGTGTGAACTCTGCGACTATAAAGGTGCTCGGAAGAACAGGCTGAAACAGCATTACGCAAGAACTCACAGTAGCGAAGAGGAGCAGTTTACGTGTAAAGTTTGCGAGTACAAATGTGCACATAAAGGAATTTTAGAGAGACATTTAAGGAAGCACGTGGATAAAAAACCGTTCACGTGTGATGTTTGCGGATACAAATGCAAGCAGAAATCAATCTTGGAGGTTCATTCGAGAATACACACCGGTGACAAGCCGTATACGtgtaaaatttgtgactaCAAGGGTGCACGAAAGGACAGGGTGAAACAGCATTATTTAAGAACTCACGCTACCGAGAAGCAGTTTACGTGTGAAATCTGCGGCTACCAGTGCACAACAAACGCATATTTAAAAAGGCACGTCAGGACCCATTCTGGTGAGAAGCCGTTTGCCTGTGGATTTTGCAATTACAAATGTGCACAGCAGGCAAGGTTGCGGTTTCACATCAGAACTCACACTGGCGATAAGCCGTTTATATGCGCAGTTTGTGACCTGAAGTTTGCAGAGAAAGAAAAACTCAAAGTTCATTTAAGAACTCACAccggcgaaaaaccatttgcgtgtataatttgtgattttaggAGTGCGCGCCAGGACGACCTAAATAAACATATAAGAACTCATACGGGCGAGAAACTGTTTCCGTGTGAAATTTGCGACTACAAGAGTTCAcgcaaagaaaacttaaagacTCATTTGAAAACGCACACAGGACTCAAACCCTTCATGTGCGAGATTTGTGAATACAAATGTGCGCATAAACACagcttaaaaaatcatttaagaactcatacAGGTGAGAAACCGTTTGGTTGCgatatttgcgattataagtGTACGCAGAAAGAAACTCCGAGCCATTCGATTAACTACCCCAAAATCAAGATAGAAATAGAAGAGCTGGTGGAAATCAAGTTGGAAGATTTGCATCATTCCGTCGACATTAAAGATGAGATTGTCATTCAGGAATATCAATCGAATTTGGAATGTAAAGCAGAAACAAGCGGGAAACCTTTCCAGTGTGAGTTGTGCGATTACAAATGTGCACACGGCGGAGCCTTGCAGAGGCATTTAAAAACACATACTGGCGACAAGCAGTTTACGTGTGGAATTTGTGAATATAAATGTTCCCGGAAAGATAGATTAAAAATCCATTTGAAAACCCATTCCGACAGCAAAGCGTTCAAGTGCGAAATTTGCGATTTTACATGTGCACGTGgggaaaaattaaacttgcacTTCTTGCGAACGCATGCCAGCAAGAAACAGTATATGTGCGATGTTTGTGGGTACAAATGTAAAACGAACTCAATCTTAAAaaggcatttaaaaattcatactgTGGAGAAGCCGTTTAGGTGcgaattttgtgaatttaaatgTTCGCAGGAAGGGAGATTAAGTATTCACGTACGgactcataccggcgagaaaccatttacgTGTGAAACTTGCGAGTATAAATGTGCATCGAAAGGAGATTTTAAAAGGcatttaagaactcatacTGGAGAGAAACCGTATGCGTGTATAATATGTGATTTTACAAGTGCGCGTCAAAATGATTTAAACAAACATGTCAGAACTCATACAGGCGATAAACCATTCACCTGTGAGCTGTGCGGCTACAAGTACACAACAAACGCATATTTGAAAAGGCATTTACGGACTCATtctggcgagaaaccgtttcaGTGTGAATTTTGCGACTATAGGTGTGCAGAGCAGGGCAgattaaatattcatattagAAGTCATACTGGCGATAAACCATTTAAATGTGAACATTGCGACTACAAGGGTGCATGTAAAGGGGACTTGAAAAGACATTCGagaactcataccggcgagaagccATTTGCCTGTattatttgtgattttaaaagcGCACGCCGGGATGATTTAAACAAACATATTagaactcataccggcgagaagccGTTCACTTGTGATACATGCGATTTCAGAAGTTCACGTAAGGAAAACTTAAAgtatcatttaaaaactcacaCAGGAGAAAAATAG
Protein Sequence
MDNTSKKHVKESRDDQPDLPKLGRPRKSAPTRKTVQRIRKYSQRVKENRDRDLEQNRFQNNNINTGLEKFTPDEDMNVNKFVDTTANTSNNSEVEDFSKRIKVEDEDIELESLHHFVDIKEETSMDDFKVDEDYERQMQLGVHAETHSAYSATLKTPSAPAAAFIPRTRNEEKTDSNGTAEIDLQILETLKSMNQEKKEDISFGNLVIVELSKIDNPAKKRLEKFGKAIKPDENLEDLRNCSQYIKVENVDIELESLHHAIEIKEEPSMNDAGMDQDRERKVQLGVHAESHTGRKTFECNICGFKCFSNLNRHLRIHTGEKPFECTVCGYKCAQKGNLRKHLQSHTGEKPFECAVCGLFFTQNRNLKYHLRIHTGKKPFECTLCDYKCYQRHILHRHLRSHSGDKFLKCAVCDYECSQEHSLKRHLRTHTGEKPFECTVCGYKCNQKGYLQEHIQTHTGEKPFECAVCGYKFSHKRYLRSHLLTHTSQKPFECTICDYKSSRKQNLREHLRNHTNGKPFGCTETSCHSSNLIQIKTEVMEVKLEDLHHCIDIKEEIVIPESNPNVVCKPDPIKKQFSCRLCDYKCARKQRLKIHFRSHTGYKPFACEVCGYKCTTNADLQRHSRTHTGDKPFECELCDYKCAQRGRLSIHVRRHTGNKPFLCSICDYKGACKGHLKIHLRTHSGEKPYTCIICDFKSARKDDLNRHLRTHTGEKPFRCDLCDYKCTQRGRLSVHVKTHAGQKPYMCDICEYKCARKRYLKIHLRTHTGERPFSCTICDFQSARQDDLNRHLRTHTGEKPYTCELCDYQSSRKQNLKTHLRTHTGEKPFECEATPCCSDIKTEIEEIEVKLEDLHHSVDIKEEISIVEFQLPEASQKSFKCESCDYKCEHKGIFERHLRKHTEKISLTCEVCGYKCKQKSILKVHLRIHTGDKPFPCELCDYKGARKNRLKQHYARTHSSEEEQFTCKVCEYKCAHKGILERHLRKHVDKKPFTCDVCGYKCKQKSILEVHSRIHTGDKPYTCKICDYKGARKDRVKQHYLRTHATEKQFTCEICGYQCTTNAYLKRHVRTHSGEKPFACGFCNYKCAQQARLRFHIRTHTGDKPFICAVCDLKFAEKEKLKVHLRTHTGEKPFACIICDFRSARQDDLNKHIRTHTGEKLFPCEICDYKSSRKENLKTHLKTHTGLKPFMCEICEYKCAHKHSLKNHLRTHTGEKPFGCDICDYKCTQKETPSHSINYPKIKIEIEELVEIKLEDLHHSVDIKDEIVIQEYQSNLECKAETSGKPFQCELCDYKCAHGGALQRHLKTHTGDKQFTCGICEYKCSRKDRLKIHLKTHSDSKAFKCEICDFTCARGEKLNLHFLRTHASKKQYMCDVCGYKCKTNSILKRHLKIHTVEKPFRCEFCEFKCSQEGRLSIHVRTHTGEKPFTCETCEYKCASKGDFKRHLRTHTGEKPYACIICDFTSARQNDLNKHVRTHTGDKPFTCELCGYKYTTNAYLKRHLRTHSGEKPFQCEFCDYRCAEQGRLNIHIRSHTGDKPFKCEHCDYKGACKGDLKRHSRTHTGEKPFACIICDFKSARRDDLNKHIRTHTGEKPFTCDTCDFRSSRKENLKYHLKTHTGEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-