Clat022722.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cantharis lateralis
Gene Symbol
-
Assembly
GCA_963170105.1
Location
OY720628.1:37727284-37735701[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.00018 0.0093 17.1 2.8 1 23 96 118 96 118 0.95
2 36 0.0025 0.13 13.5 4.0 1 23 124 146 124 146 0.97
3 36 4.1e-06 0.00021 22.3 3.7 1 23 152 174 152 174 0.98
4 36 2.9e-05 0.0015 19.6 1.2 1 23 180 202 180 202 0.98
5 36 0.012 0.64 11.4 3.3 1 23 208 230 208 230 0.99
6 36 0.0027 0.14 13.4 4.5 1 23 236 258 236 258 0.99
7 36 0.0005 0.026 15.7 3.0 1 23 264 286 264 286 0.98
8 36 0.013 0.67 11.3 2.0 1 23 292 314 292 314 0.94
9 36 0.0032 0.17 13.2 1.4 1 23 320 342 320 342 0.98
10 36 2.8e-07 1.5e-05 25.9 2.4 1 23 348 370 348 370 0.99
11 36 1.8 91 4.6 2.9 1 23 376 398 376 398 0.96
12 36 0.00013 0.0065 17.6 7.3 1 23 404 426 404 426 0.98
13 36 0.01 0.54 11.6 2.5 1 23 432 454 432 454 0.98
14 36 1.5e-05 0.00078 20.5 1.1 1 23 460 482 460 482 0.98
15 36 0.0068 0.35 12.2 2.4 1 23 488 510 488 510 0.99
16 36 0.0057 0.29 12.4 5.5 1 23 516 538 516 538 0.99
17 36 0.0029 0.15 13.3 1.7 3 23 614 634 612 634 0.97
18 36 3.8e-06 0.0002 22.4 2.5 1 23 640 662 640 662 0.98
19 36 0.0013 0.067 14.4 2.3 1 23 668 690 668 690 0.99
20 36 3.5e-05 0.0018 19.4 4.3 1 23 696 718 696 718 0.98
21 36 0.00037 0.019 16.1 0.5 1 23 724 746 724 746 0.97
22 36 0.00017 0.0091 17.2 1.1 1 23 752 774 752 774 0.99
23 36 0.1 5.3 8.5 4.5 1 23 831 853 831 853 0.98
24 36 0.0013 0.067 14.4 3.6 1 23 859 881 859 881 0.98
25 36 0.032 1.7 10.1 3.1 1 23 887 909 887 909 0.99
26 36 3.8e-06 0.0002 22.4 0.6 1 23 915 937 915 937 0.98
27 36 0.0035 0.18 13.1 2.4 1 23 943 965 943 965 0.99
28 36 0.00081 0.042 15.1 3.4 1 23 971 993 971 993 0.98
29 36 0.45 23 6.4 4.6 1 23 999 1021 999 1021 0.98
30 36 0.00023 0.012 16.8 3.1 1 23 1027 1049 1027 1049 0.99
31 36 0.0012 0.063 14.5 1.3 1 23 1055 1077 1055 1077 0.98
32 36 0.00014 0.007 17.5 2.7 1 23 1083 1105 1083 1105 0.98
33 36 3.5e-05 0.0018 19.4 3.3 1 23 1111 1133 1111 1133 0.99
34 36 9.3e-05 0.0048 18.0 2.1 1 23 1139 1161 1139 1161 0.98
35 36 6.7e-05 0.0035 18.5 2.8 1 23 1167 1189 1167 1189 0.99
36 36 0.00032 0.017 16.3 2.9 1 23 1195 1217 1195 1217 0.98

Sequence Information

Coding Sequence
ATGAAACCTTTTGCTGATGTGCGTTTATTCCAGGAAACACCAGAACATTCCGATGGCTGCTTTCAAATTAAGACGGAGGTGGAAGAAGAAACGGGATACGAGTTGGGAGATTTGCATCATTCCATCGATATAAAAGAAGAGACCAATATCGAACCACAGCCGGGTAGAGAATGCAAACCGGAAACCAGCGTGAAACCGTCCATGTGCGAAGGCTGGGACTACGCGTATGCTCCCGAAGGAGATTTAAAAACTGACGTTGGAACTCCCGAAGGTAACAGGAAACCTTTTTTGTGTaacatttgtgattataaatgtgcACGTAAAGGCCAATTGACGAGACATTTAACCACTCATACAGACGAAAAACCATTTGCTTGCGAATTTTGTGTTTACAAATGTTCACGTAAAGAACTTTTACGGAGGCATTTGAAGACCCACACAGGCGAGAAGCCGTTCTCGTGCGAAACCTGTGGTCGCAAGTTCACGCAGAGCGCTCATTTTAAAGTTcatttaagaactcatacGGGCGAAAAGCCGTTCGTGTGCGAAATTTGTGGATACAAGTGCATACAGAATGCAAAGCTGAAAATTCACTTGAGAACCCATACGGGGGAAAAACCGTATTCGTGTGAATTTTGTGCGTATAAATGTACGACGAAGGGAGTTTTGACTACGCATTTAAGAACccataccggcgagaaaccgtaTTCGTGCGAATTCTGCGAGTATAAATGTGCGCACAAAGTAAGTTTGCAGGTTCATTTGAGAACTCACACCGGAGAGAAACCATTCATGTGTGAATTTTGCGATTACAAATGTGTGCAGAAGTCGCTGTTGAATCTTCATGTGAGAACTCAcaccggggaaaaaccgttcCTCTGTGAATtctgcgattataaatgtgcaCGTAAGGAAGGATTGAAAAGTCATTTGACCATCCATACCGGCGAGAAAACTTTCGAATGCGAATTTTGCGACTATAAGAGTGCCAAGAAGGAACGGTTGAAAATTCATCTACGAACTCATTCCGGGGAAAAACCGTATAAGTGTGATACTTGCGGTTTGACCTTTACGCAGAATGGAAACTTTAAGAAGCATTTGAGAACGCAcaccggggaaaaaccgttcATGTGCGATATCTGTGGATATAAATGCGGATGTAAAGCTCAGTTGTCGGGTCACTTGACAACCCATacgggggaaaaaccgttcTCGTGTGAAATGTGCAATCATAAATTTGCTCGTAAGCAACACTTGCGAAGGCATTTGAAAACCCACACCGGGGAGAAGCCGTTTTCTTGTGGATTTTGCGAATATAAATGTGCGACGAAGGGAGTTTTACGAAGTCATTTAAGAACGCACACCGGCGAAAAGCCGTTCGTctgtgaaatttgtggttaCAAATGCATACAGAAGGGAATGTTAAAAGTCCACTTGAGAACTCATACGGGGGAAAAACCGTACTCGTGTGAACTCTGCGACTATAAATGTACGATCAAGGGAGTTTTGAAAACTcatttaagaactcatacGGGGGAAAAACCGTATTCGTGTGAATTCTGCGACTATAAATGCGGACATAAGGGAAGCTTCAAGATTCATATCAGAACTCATACCGGAGAGAAGCCCCATACGTGTGAATTTTGCGGTTACAAATGCATACAAAAAGCGGAAACTCCGTGCCATTCCAACGATTTCGCACAAATTAAGACGGAAGAAGATGTGGAGTCTCAAATGGCAGGTCTGCATCATTCCATCGACATTAAAGAGGAGACTTCGATTATGGAATTTAAAGTAGATGTGGAGTGCAAACCTGAAATTAGCGAAAAACTGATTGCATGTGGAATTTGCGACTATAAATGTTCGCGGAAGGAACGGATGAAAATTCATTTGAgaactcatactggcgagaagccATTtacgtgtgaaatttgtggcTACACATGCGCCCAAAAGCAGAATTTAAAGAGGCATTTGTTGACTCATACGGGCAACAAGAGATTTAAGTGTGAATTATGCGACTGCAAGTacgaatttattggaaatttaaagGTTCACTTGAGAACTCACAGCGGCGAAAAGCCATttatgtgtaaaatttgcggTTACAAATGCACACAGAAAGGAAGTTTGAAGACTCATTTGAAAACTCATACCGGTTTAAAGCCGTTTTTCTGTGGAATGTGCGATTACACCGGCGCACAAAAGCAAAGCTTGCAGCGACACATAATGACACATACGGGGGAAAAACCTTTTACGTGtgaaatttgcgattataaatgcgCGAATTCGggagttttgaaaattcactTAAGAACTCACACTGGCGAGAAGCCGTTCGAAACGCCAGGCTACTCCCAAATTAAGACGGAAGAAATAGAATTCAAGTTGGAAGATCTGCACCATGCGATTGATATTAAAGAGGAGCAGACCTCGCTGCTGGCAACCCAACCGGAGAGAGATTGCAAACCGCAAACGAGCAGCAAAGCGTTTTCGTGTAAGATTTGTAGTTACAAATGTAATCGGAAAGGAATTTTCGAAACTCATTTACGCACTCACAGTGGAGAGAAACCATTTATGTGTGAATTCTGTAATTATACATGCGCGCAGAAACCGAGTCTAAAAAGACATTTAACGACTCACACAGGCGACAAACCTTTCACCTGCGAAATATGTGCTTACCGGTGTGCGCAGAGCGGCGATTTAAAATGTCACATTAGGACCCATACCGGTGAGAAACCATATACCTGTGAAATTTGTAACTATAAATTTGCAGATCGGAGCAATTTGAGAGGtcatttgaaaattcacaCTGGCGAAAAGCCATTTAAATGCGGATTGTGCAATTTTCAGTGCGCCGATGGCAGCAATTTAAAGAGTCACTTAAAAACTCATacgggggaaaaaccgttctcttgtgaattttgtgactataaatgtACACGTAAAGGAGTTTTGAGAGTTCATTTAAGAACTCACACAGGCGAGAAGCCGTTTATTTGTGAATTCTGCGATTTTAGAAGTGCGCACAAGCAAAGCTATAAACTGCATTTCCGGACTCACACTGGCGAAAAACCGTTCAcctgtgaaatttgtgattatGAATGTTCGCATAAAGGTAGTTTGTTGATTCACTTAAAAACCCATACTGGTGAAAAGTTGTTCGAGTGCGAGAGTTGCGATTACAAAAGTGCGCATAAAGGAAGTTTGGAGACTCACGTAAgaactcatactggcgagaaaccataTATGTGTGAGTTTTGCGACTACGCATGCGCGCAGAAGACGAGCTTGAAGAGACATTTGATGACTCACAGCGGCGACAAACCGTTCACTTGCGAATTTTGCGACTACACATGTGCGCAGAAGCCCAGTTTAAAAAGACACATGATGACTCATACCGGCGAGAAGCCATTTACGTGCGATATTTGTGACTACAAATGCGCACGCAAGGAAGTTTTGAAGAGACACCTAAGAATCCACAACGCCGAGAAGCCGTTCACGTGTGAAATTTGCGGCTACAAATGTACGGAAAATGGGAATTTTACAAGTCATTTAAGAACTCATGCTGGTGACAAACCGTTTGTTTGTGAAGTTTGTGAATTTAAATGTGCtcgtaaagaaaatttaaaaagacatCTGAAAAATCACTCGGGCGAGAAACAGAGTACCATTGAAACCGGTGGTTAA
Protein Sequence
MKPFADVRLFQETPEHSDGCFQIKTEVEEETGYELGDLHHSIDIKEETNIEPQPGRECKPETSVKPSMCEGWDYAYAPEGDLKTDVGTPEGNRKPFLCNICDYKCARKGQLTRHLTTHTDEKPFACEFCVYKCSRKELLRRHLKTHTGEKPFSCETCGRKFTQSAHFKVHLRTHTGEKPFVCEICGYKCIQNAKLKIHLRTHTGEKPYSCEFCAYKCTTKGVLTTHLRTHTGEKPYSCEFCEYKCAHKVSLQVHLRTHTGEKPFMCEFCDYKCVQKSLLNLHVRTHTGEKPFLCEFCDYKCARKEGLKSHLTIHTGEKTFECEFCDYKSAKKERLKIHLRTHSGEKPYKCDTCGLTFTQNGNFKKHLRTHTGEKPFMCDICGYKCGCKAQLSGHLTTHTGEKPFSCEMCNHKFARKQHLRRHLKTHTGEKPFSCGFCEYKCATKGVLRSHLRTHTGEKPFVCEICGYKCIQKGMLKVHLRTHTGEKPYSCELCDYKCTIKGVLKTHLRTHTGEKPYSCEFCDYKCGHKGSFKIHIRTHTGEKPHTCEFCGYKCIQKAETPCHSNDFAQIKTEEDVESQMAGLHHSIDIKEETSIMEFKVDVECKPEISEKLIACGICDYKCSRKERMKIHLRTHTGEKPFTCEICGYTCAQKQNLKRHLLTHTGNKRFKCELCDCKYEFIGNLKVHLRTHSGEKPFMCKICGYKCTQKGSLKTHLKTHTGLKPFFCGMCDYTGAQKQSLQRHIMTHTGEKPFTCEICDYKCANSGVLKIHLRTHTGEKPFETPGYSQIKTEEIEFKLEDLHHAIDIKEEQTSLLATQPERDCKPQTSSKAFSCKICSYKCNRKGIFETHLRTHSGEKPFMCEFCNYTCAQKPSLKRHLTTHTGDKPFTCEICAYRCAQSGDLKCHIRTHTGEKPYTCEICNYKFADRSNLRGHLKIHTGEKPFKCGLCNFQCADGSNLKSHLKTHTGEKPFSCEFCDYKCTRKGVLRVHLRTHTGEKPFICEFCDFRSAHKQSYKLHFRTHTGEKPFTCEICDYECSHKGSLLIHLKTHTGEKLFECESCDYKSAHKGSLETHVRTHTGEKPYMCEFCDYACAQKTSLKRHLMTHSGDKPFTCEFCDYTCAQKPSLKRHMMTHTGEKPFTCDICDYKCARKEVLKRHLRIHNAEKPFTCEICGYKCTENGNFTSHLRTHAGDKPFVCEVCEFKCARKENLKRHLKNHSGEKQSTIETGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00270693;
90% Identity
iTF_00270693;
80% Identity
iTF_00270693;