Clat022780.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cantharis lateralis
Gene Symbol
-
Assembly
GCA_963170105.1
Location
OY720628.1:38471559-38481077[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 2.6e-06 0.00014 22.9 0.9 1 23 121 144 121 144 0.97
2 37 0.0013 0.07 14.4 1.7 1 23 150 172 150 172 0.98
3 37 0.00041 0.021 16.0 0.9 1 23 178 200 178 200 0.98
4 37 3.5e-05 0.0018 19.4 1.3 2 23 221 242 220 242 0.97
5 37 0.031 1.6 10.1 5.0 1 23 248 270 248 270 0.99
6 37 0.0033 0.17 13.2 1.7 1 23 276 298 276 298 0.98
7 37 0.0002 0.01 17.0 5.4 1 23 304 326 304 326 0.99
8 37 0.0017 0.09 14.0 4.2 1 23 332 355 332 355 0.96
9 37 0.00075 0.039 15.2 0.2 1 23 361 383 361 383 0.98
10 37 0.00028 0.015 16.5 5.3 1 23 389 411 389 411 0.98
11 37 7.7e-05 0.004 18.3 1.6 1 23 473 496 473 496 0.96
12 37 7.1e-06 0.00037 21.6 0.2 1 23 502 524 502 524 0.99
13 37 0.00084 0.044 15.0 1.9 1 23 530 552 530 552 0.99
14 37 0.2 10 7.6 4.0 1 23 558 580 558 580 0.98
15 37 0.00022 0.011 16.9 5.8 1 23 586 608 586 608 0.99
16 37 0.00059 0.031 15.5 2.0 1 23 614 637 614 637 0.96
17 37 0.001 0.053 14.8 0.3 1 23 643 665 643 665 0.98
18 37 0.0001 0.0053 17.9 2.6 1 23 671 693 671 693 0.98
19 37 0.00031 0.016 16.4 0.6 1 23 699 721 699 721 0.98
20 37 9.4e-07 4.9e-05 24.3 0.6 1 23 780 803 780 803 0.97
21 37 0.00014 0.0074 17.5 2.1 1 23 809 831 809 831 0.98
22 37 0.0023 0.12 13.6 4.4 1 23 837 859 837 859 0.98
23 37 4.1e-05 0.0021 19.2 0.9 1 23 865 887 865 887 0.99
24 37 0.00011 0.0057 17.8 4.6 1 23 893 915 893 915 0.98
25 37 0.001 0.054 14.7 4.3 1 23 921 944 921 944 0.96
26 37 9.8e-07 5.1e-05 24.3 0.7 1 23 1016 1039 1016 1039 0.97
27 37 0.022 1.2 10.5 2.0 2 23 1046 1067 1045 1067 0.96
28 37 0.00076 0.04 15.2 1.1 1 23 1073 1095 1073 1095 0.98
29 37 0.0015 0.08 14.2 5.4 1 23 1101 1123 1101 1123 0.99
30 37 4.2e-05 0.0022 19.1 1.7 1 23 1129 1151 1129 1151 0.98
31 37 0.012 0.61 11.4 3.5 1 23 1157 1179 1157 1179 0.99
32 37 0.00084 0.044 15.0 1.3 1 23 1185 1207 1185 1207 0.98
33 37 0.00044 0.023 15.9 5.4 1 23 1213 1235 1213 1235 0.99
34 37 0.0012 0.062 14.5 3.5 1 23 1241 1264 1241 1264 0.94
35 37 0.00022 0.012 16.8 0.2 1 23 1270 1292 1270 1292 0.98
36 37 0.29 15 7.0 4.7 1 21 1298 1318 1298 1320 0.93
37 37 2.7e-05 0.0014 19.7 0.7 1 23 1326 1348 1326 1348 0.99

Sequence Information

Coding Sequence
ATGGGCGACGGCGAAACGGGAGACGGCGAAGTGGCGACAACGAAATGTCCCGTCCGAAGACCCGATAGACCGTTTATTCTTTCGTTACTCCTCGGGCCGGGGGAAAGTTTCATATTAAATGCGAACAACAGCTTAAGTCAATTTCTCCGAGATAGTATATCGAAGCACGAACTGACGATAGATCTGTTACAGGACACCCTGTGTGCGTCAACGAGCAgcttccaaattaaaatagaagaaGAGGAAATCGAAATCAAGTTGGAAGATCTGCACCATTCCATCGACATTAAGGAAGAGCCTACGATACTACTGGAGCCTAAACCTCGGAAGAAACGCAGACCCCAGATTAGCGGGATACCatttgtatgtaatatatGCGAccgtaaattttcatttaaagacaAATTGAAGCGACACATTCTGGTCGTCCACCTTAAGGAAAAACCGTTCAAGTGCGAAATTTGTCCTTATAGAAGTGCTCGTAAGGAATGTTTGAAGGTTCATTTGATGAACCATGCAGGCAAGAAACCCTACGTGTGTACAGTATGTGACTACAAAGGTGCAACGAAGACCAGTTTAACAACGCACATGAAATATCATACCGGCAGCAGCACTAAATTGAAGTATCgtaaagtaaattataatggGGTAAAATCGCTCGAATGCGGAATTTGTGGGTATAAATGTGCGACTAACAGTACACTGAAATATCACATAAGAACTCATACCGGTGAGAAGCCCTATACCTGTGCAATATGTAGTTATAAATGTGCACATAAAACGAGGTTGCGGATTCACTTGAGAAGCCACACGGGCGAGCGACCGTTTATGTGTAAATTATGCGAATACAAAGCTACAACGAGCAGTAAGTTGAAATCGCATGTCCAAACTCATACCGGGGAGAAGCCCTACAGGTGTGGCCTCTGCGACTACAGATGTGTAAGCAACAGTCATTTAAAATCTCACATGAAAAGTCATACCGGAGAGAAACCGTATCCGTGTGAACTGTGCGACTATAAATGTTCACATAAGGGCAATCTACGAATTCATTTAATTGTTTGTCATACAGGCGAAAAGCAGTTTCCCTGTACAACTTGTAATTACAAAGCTGTAACTAAAGGGGACTTGATAATTCACTTAAGAACTCACACaggcgaaaaaccatttacgTGCCATCTTTGCGACTACAAATGTTCGCAAAAGGGCAGCTTGAACATACACCTTCGATCTCACACCGGCGATAAGCCCTtcGACACCCTCAGCTCATCAACGAGCAGCTTCAAAATTAAGATAGAAGAAGAGGAAATAGATATCAAGTTGGAAGATTTGCATCATTCTATCGACATCAAGGACGAACCTACGATACTGGAACCTAAGCCTCGGAAGAAGCTCAAACTTCACCTCAGCGGGTTACCATTTGTATGTCATGCATGCGAACGTAGATTTTCACGTAAAGACAAATTAAAGCAACATATTCTGGTCATTCATTTTAAGGAAAAGCGGTTCAAATGTGGAATCTGTGGTTATAAATTTGCGACTAACAGTGCACTGCAACCTCACATAAgaactcatactggcgagaagccCTATACCTgtgaaatatgtaattataaatgtGCGCAGAAGACGAGCTTGGGAATTCACCTACGTAGCCACACGGGCGAGCGACCGtttacttgtaaaatatgCGAATACAAAGCCACAACGAGCAGTAAGTTGAAATGTCATGTCCAGACTCATACCGGGGAGAAGCCCTTCAGGTGTGACCTATGCGACTACAGGTGTGCAAACAACACTCATTTAAAATCTCATATGAGAAGCCATACCGGAGAGAAACCGTATGCGTGTGAACTGTGCGACTATAAATGTTCACACAAAGGTAATTTACGAATTCATTTGATTGTTTCTCATACAGGCGAAAAGCAGTTTCCATGTAAAACTTGTAATTACAAAGCCGTAACCAAAGGAGACTTGGTAATTCATTTAAGAACTCACACaggcgaaaaaccatttacgTGTGAACTTTGCGACTACAAATGTTCGCAAAAGGGCAGCTTGAATATACATCTTCGATCTCACACCGGCGACAAGCCCTTCGtttgtaaaatatgtagttaCAAAAGTGCTTCGAAGGGACAGTTGAATATTCATCTCAAAACTCATCGAGACAAGGACACCCTAAGTGCATCAACGAGCAGCTTCAAAATTAAGATAGAAGAAGAGGAGCTGGATATCAAGTTGGAAGATTTGCATCATTCCATCGACATCAAGGACGAGCCTACGATACTAGAACCTAAACCGGAGAGGAAACGTAAACCCCAAACCACCGGAATACCTTTTGTTTGTAATGTATGCGATCGTAACTTTTCACGTAAGGACAAATTAAAGCGACACATTCTGGTCATTCACTTAAACGAAAAACTGTTCATGTGCGGAATCTGTGGGTTTAAATGTGCGACTAACAATACACTGAAATCTCACATAAGAACTCATACTGGTGAGAAGCCCCATACCTGTGCgatatgtaattataaatgtGCGCAGAAGACGAGCTTGCGAATTCATTTAAGGtctcataccggcgagaaaccgtaTTCGTGTCAATTGTGTGATTATATGGGTGCAACGAGcaccaatttaaaaactcacatgagaactcatactggcgaaaaaccatttacgTGCGAACTTTGTGACTACAAATGTGCGACCAACGCCCACTTAAAATCGCATATGAGGAGTCATACCGGAGAGAAACCGCATACGTGTGATCTGTGCGGTTATAAATGTTCACATAAGGGCAATTTACGAATTCATTTGATTGTTTCTCATAAAGGCGAAAAGCAGTTTCCATGTAATACTTGTAATTACAAGGCTGACACCCTGTGCGCATCAACAAGCAGCATTCAAATTAAGATCGAAGAAGAGGAAATCGAAATCAAGTTGGAAGATTTGCATCATTCCATCGACATTAAGGAAGAGCCTACGATACTACTAGAATCAAAACCTCGGAGGAAACGCAAACCCCAAACCAGCGGGATACCatttgtatgtaatatatGCGATCGTAAATTCTCACGTAAGGACAAATTGAAGCAACACATTCTGGTCATCCATTTTAAGGAAAAACCGCTCAAGTGTGAATTTTGTGCTTACAGATGTGCACGTAAGGAATCGTTAAAAGTTCATTTGATGAACCACGCAGGCGAGAAACCGTACATGTGTACAGTATGTGACTACAAAGGTGCAACGAAGACCAGTTTGACATCGCACATGAAATATCATACCGGTGGAAAACCGTTTACGTGTGAAATTTGCGGATATAAATGTCCCAGCAGCAGTCATTTACGTTTCCATCAGAGAACGCACAATGGCCGGAAGTCGTATAACTGtgatatttgtaattatacgTGCGCAGGGAGCAGTTCGTTGAAGTCGCATATCAGAACTCATACCGGAGAGAAGCCGTTTACGTGCGCCGTTTGTAATTACAAATGTGCGCACAAAGCAAGCATACGAATTcatttaagaactcatacCGGTGAGAAGCCGTATACGTGTCAAATATGTGATTATAGAGGTTTAACGAGCACCAATTTAAAATCCCACATGAgaactcatactggcgagaaaccatttactTGTGAACTTTGCGACTATAAATGTGCAACCAACGCCCACCTAAAATCCCACAGAAGgactcataccggcgagaaaccgtaCACATGCGAACTGTGCGGCTACAAATGTTCACATaagggaaatttaaaagtccACTCGATTGTTTTCCATACGGGCAACAAACCCTTTccgtgtaaaatttgtaattacaaaGGCGTAACCAAGGGAGACTTAATAATTCACTTAAGAACTCACACTGGCGAAAAGCCGTACgcttgtgaaatttgtgactaCAAGTGTTCGCAGAAAGGAAGGTTGAATATTCATTTCCGATGCCATACCGGAGACAAACCGTTCACTTGTAAGATTTGCGGTTATAAAAGTGTATCGAAAGGACAGTTAAATGTTCACTTAAAAACTCATAGAAGCTAG
Protein Sequence
MGDGETGDGEVATTKCPVRRPDRPFILSLLLGPGESFILNANNSLSQFLRDSISKHELTIDLLQDTLCASTSSFQIKIEEEEIEIKLEDLHHSIDIKEEPTILLEPKPRKKRRPQISGIPFVCNICDRKFSFKDKLKRHILVVHLKEKPFKCEICPYRSARKECLKVHLMNHAGKKPYVCTVCDYKGATKTSLTTHMKYHTGSSTKLKYRKVNYNGVKSLECGICGYKCATNSTLKYHIRTHTGEKPYTCAICSYKCAHKTRLRIHLRSHTGERPFMCKLCEYKATTSSKLKSHVQTHTGEKPYRCGLCDYRCVSNSHLKSHMKSHTGEKPYPCELCDYKCSHKGNLRIHLIVCHTGEKQFPCTTCNYKAVTKGDLIIHLRTHTGEKPFTCHLCDYKCSQKGSLNIHLRSHTGDKPFDTLSSSTSSFKIKIEEEEIDIKLEDLHHSIDIKDEPTILEPKPRKKLKLHLSGLPFVCHACERRFSRKDKLKQHILVIHFKEKRFKCGICGYKFATNSALQPHIRTHTGEKPYTCEICNYKCAQKTSLGIHLRSHTGERPFTCKICEYKATTSSKLKCHVQTHTGEKPFRCDLCDYRCANNTHLKSHMRSHTGEKPYACELCDYKCSHKGNLRIHLIVSHTGEKQFPCKTCNYKAVTKGDLVIHLRTHTGEKPFTCELCDYKCSQKGSLNIHLRSHTGDKPFVCKICSYKSASKGQLNIHLKTHRDKDTLSASTSSFKIKIEEEELDIKLEDLHHSIDIKDEPTILEPKPERKRKPQTTGIPFVCNVCDRNFSRKDKLKRHILVIHLNEKLFMCGICGFKCATNNTLKSHIRTHTGEKPHTCAICNYKCAQKTSLRIHLRSHTGEKPYSCQLCDYMGATSTNLKTHMRTHTGEKPFTCELCDYKCATNAHLKSHMRSHTGEKPHTCDLCGYKCSHKGNLRIHLIVSHKGEKQFPCNTCNYKADTLCASTSSIQIKIEEEEIEIKLEDLHHSIDIKEEPTILLESKPRRKRKPQTSGIPFVCNICDRKFSRKDKLKQHILVIHFKEKPLKCEFCAYRCARKESLKVHLMNHAGEKPYMCTVCDYKGATKTSLTSHMKYHTGGKPFTCEICGYKCPSSSHLRFHQRTHNGRKSYNCDICNYTCAGSSSLKSHIRTHTGEKPFTCAVCNYKCAHKASIRIHLRTHTGEKPYTCQICDYRGLTSTNLKSHMRTHTGEKPFTCELCDYKCATNAHLKSHRRTHTGEKPYTCELCGYKCSHKGNLKVHSIVFHTGNKPFPCKICNYKGVTKGDLIIHLRTHTGEKPYACEICDYKCSQKGRLNIHFRCHTGDKPFTCKICGYKSVSKGQLNVHLKTHRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-