Clat022674.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cantharis lateralis
Gene Symbol
-
Assembly
GCA_963170105.1
Location
OY720628.1:37436179-37440327[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 45 0.0022 0.11 13.7 2.5 3 23 46 66 44 66 0.98
2 45 8e-05 0.0041 18.2 1.3 1 23 72 94 72 94 0.98
3 45 0.0014 0.075 14.3 6.2 1 23 100 122 100 122 0.99
4 45 0.012 0.64 11.4 1.7 1 23 128 150 128 150 0.97
5 45 9.7e-05 0.0051 18.0 4.3 1 23 156 178 156 178 0.99
6 45 0.0007 0.036 15.3 1.4 3 23 186 206 184 206 0.98
7 45 9e-05 0.0047 18.1 2.1 1 23 212 234 212 234 0.99
8 45 0.0066 0.34 12.2 2.3 3 23 242 262 240 262 0.97
9 45 2.6e-06 0.00013 22.9 1.7 1 23 286 308 286 308 0.98
10 45 0.00024 0.012 16.7 1.5 1 23 314 336 314 336 0.98
11 45 0.00024 0.012 16.8 0.8 1 23 342 364 342 364 0.98
12 45 0.0014 0.071 14.3 1.5 1 23 370 392 370 392 0.98
13 45 0.013 0.66 11.3 2.0 3 23 400 420 398 420 0.97
14 45 0.0042 0.22 12.8 4.3 1 23 433 455 433 455 0.97
15 45 0.0045 0.23 12.7 1.3 1 23 461 483 461 483 0.98
16 45 9.4e-05 0.0049 18.0 5.4 1 23 489 511 489 511 0.98
17 45 0.00093 0.048 14.9 1.6 3 23 519 539 517 539 0.98
18 45 0.00079 0.041 15.1 1.0 3 23 547 567 545 567 0.98
19 45 0.0042 0.22 12.8 4.3 3 23 575 595 573 595 0.98
20 45 0.0027 0.14 13.4 0.8 1 23 601 623 601 623 0.96
21 45 0.0032 0.17 13.2 3.5 3 23 631 651 629 651 0.98
22 45 0.0019 0.1 13.9 1.8 1 23 657 679 657 679 0.97
23 45 3e-05 0.0015 19.6 0.8 1 23 685 707 685 707 0.98
24 45 0.0004 0.021 16.0 0.8 1 23 721 743 721 743 0.98
25 45 0.0086 0.45 11.8 5.1 1 23 749 771 749 771 0.98
26 45 0.00032 0.016 16.4 5.4 1 23 777 799 777 799 0.98
27 45 0.00065 0.034 15.4 1.4 1 23 805 827 805 827 0.98
28 45 4e-05 0.0021 19.2 2.9 1 23 833 855 833 855 0.99
29 45 4.7e-06 0.00024 22.1 1.9 1 23 861 883 861 883 0.99
30 45 0.0051 0.26 12.6 6.1 1 23 889 911 889 911 0.99
31 45 0.00066 0.035 15.3 1.7 1 23 917 939 917 939 0.97
32 45 1.9e-06 9.8e-05 23.4 1.2 1 23 945 967 945 967 0.99
33 45 0.0011 0.058 14.6 3.1 1 23 973 995 973 995 0.97
34 45 7.8e-05 0.0041 18.3 1.2 1 23 1042 1064 1042 1064 0.97
35 45 0.00016 0.0084 17.3 1.7 1 23 1070 1092 1070 1092 0.98
36 45 0.00016 0.0084 17.3 2.7 1 23 1098 1120 1098 1120 0.99
37 45 0.0016 0.086 14.1 1.6 1 23 1126 1148 1126 1148 0.97
38 45 0.096 5 8.5 4.1 1 20 1154 1173 1154 1176 0.93
39 45 0.00029 0.015 16.5 3.8 1 23 1182 1204 1182 1204 0.99
40 45 0.00079 0.041 15.1 2.4 1 23 1210 1232 1210 1232 0.98
41 45 0.00017 0.0087 17.2 1.9 1 23 1238 1260 1238 1260 0.99
42 45 0.00016 0.0083 17.3 4.1 1 23 1266 1288 1266 1288 0.98
43 45 0.0075 0.39 12.0 1.2 1 23 1294 1316 1294 1316 0.97
44 45 5e-05 0.0026 18.9 0.9 1 23 1322 1344 1322 1344 0.99
45 45 0.0049 0.25 12.6 7.6 1 23 1350 1372 1350 1372 0.98

Sequence Information

Coding Sequence
ATGAAGACGGAGGAGCAAATCGAGATCAAGGTGGAAGATTTACATCATACCTACGATATCAAGGAAGAGAAGTCGACTGCGGTGTATCTACCGGATGGAGAATGCAAATCGGAGACAGAGGATAAAAAGTTTGGGTGCGAAATTTGCGACTACAAatgtaaaatgaaaagaaactTAAAAGTTCACTTGTTGACTCATTCTAACGAGAAACCATTTACGTGTGCGGTGTGCGGGTATAAGTGTGCGCGCAAGGGGGACTTGAAGAGACATTTGGTGACTCATAGTAACGTGAAGTCGTTTAAATGTAAGATTTGCGATTATCGATGTGCTCATCGGGGGAGTTTAAAATCTCATTCGAGAACCCATACGGGCGAGAAGCCGTTCGCTTGCAAGTTCTGTGATTACAAATGTACGCTGGGCGGAAACCTGAAGATTCATCTGAGAGTTCATACCGGGGAGAAGCCGTATAGATGTGGGATTTGCGATTACAGATGTTCGCATAAGGGAAGCTTAAAATCGCATTTAAGAGTGCATACCGGAGAGAAGCCGTTTGGATGTGAGATTTGCGATTATAGATGTTCCGAGAAGGGGAGTTTGAAGAAGCATGTTCGGATCCATACCGGGGAGAAACCGTACGTCTGTGAGGTGTGCGATTATAAGTGTACGGAAAAGGGGAGTCTAAAATCGCACTTGCGGACTCATACGGGTGAGAAACCGTACGGCTGTGAGCTTTGCGATTACAAGAGTGCACATAAGAGAAGCTTGAAAAATCATCTGAGAAGTCATTCGGTCGAGCAGGAGTTTATCGAGAATATTGGAGTTACCGACAGCCAATCCAATCCCCCAGCGAAAATGTTTCCGTGTGATATCTGCGGATATACCTGCACCAGTaggggaaatttaaaaatgcacctGAGAACGCATACGGGCGAGAAGCCGTACATGTGCGCGATTTGTGATTATAAGTCTGCGCATAAGGGAAGTCTGAAATCTCACTTGCGAACGCACACAGGGGAAAAACCGTTCGTCTGCCCAATCTGTGATTATAAGACCGCACATCGGGTGAGCTTGAAGGCCCACTTTAGGGTACATTCCGGTGAGAAGCCGTACGTATGCGAAATCTGCGACTACAGATGTATCGAAAAGGGCAGTTTAAAATCGCATTTGTTCACCCATACCGGGGAGAAGCCCTTCGGGTGTGCCACGTGTGACTATAAATGTGCCCGTAAGGGAGATTTAAAGGTCCATTTTAAAACTCATGCCGCAAATTTGCAATACATTCCGGACGGTAAGCGTTTTGCATGTCAACTGTGCGATTATAAGTGCGCCCACAAGGCCAGCTTACGAaaccatttaaaaagtcataCGGGGGAAAAACCGTACGCCTGTAATTTGTGCGACTACCGGTGTACGCTTATGGGAAATTTACGCATCCACACCAGAGTGCACACTGGGGAAAAACCGTTCTCCTGCGAAATATGCGATTACCGATGTTCACACAAGGGAAGTTTACGCACCCATTTAAGAACGCAcaccggggaaaaaccgtttggTTGTGACATCTGTGATTACAAATGCACCGAGAAGGGAAGTTTGAAGAAACATGTCCGAATTCACACGGGTGAAAAACCGTACGGTTGTGAAATTTGCAACTATAAATGTTCGGAGAAGGGCAGCTTGAAAGCGCATTTACGAATTCACACCGGGGAAAAACCATACGGGTGTGAATTTTGCGATTACAAATGTGCACACAAGGGCAGCTTAAAGTCGCATTTGAGAACTCACACCGGCGAGCGCCCGTTCTCATGCGAAGTCTGCAGTTACAAATGTGCACGTAAGGcggatttaaaaatccatttggTTATCCAcaccggggaaaaaccgtacGGGTGCGCACATTGCGATTATAGGTGTGCGTACAAAGCCAGCCTGAAATCGCACTTGCGGACTCATACAGGAGAGAAACCGTTCGCCTGTGAGTTTTGCGATTACAGATGTTCCGAGAAGGGAGGTCTAAAGTCGCACGTCAGGACTCATACGGGAGAGAGACCGTATCCCTGCGagatttgtgattataaatgtgcCCGAAAAGGCGACTTGAAGGTTCATTTGAAAATGCATGCCGACGACAATCCGCTTCCCGAGTCGCTGGAAAAACAGTTTACGTGCGAAATTTGTGATTACCAGACGGCACATCGGTCGAGCTTGGTCAGCCACGTCAGAATCCAcaccggggaaaaaccgttcTCTTGCCAGTTCTGCGACTACAAATGTGCTCATCGGGGAAGTCTAAAAACTCACGTCCGAATTCATACTGGAGAAAAACCATTCACCTGCAATGTCTGTGACTACAAATGTTCCCATCGTGGAAGTCTAAAAACTCACCTACGAATCCACACGGGGGAAAAACCGTACGCCTGCGAAGTTTGCGAATACAGATGTACAGAACGGGGAAGTTTGAAGAAACATTTGAGAATACACACCGGAGAAAAACCGTACCAATGCGAAATTTGCGACTACAAATGCACAGAGAAAGGTAGCTTGAAGTCTCATTTGCGAACGCACACCGGAGAAAAGCCGTACACTTGTGGaatttgtgattacaaattcacCCAGAAAggatatttcaaaatccacTTAAGGACGCACACTGGAGAGAAGCCCTTCCAATGCCATCTGTGCGACTATAAAAGTGCCCACAAGGGCAGCTTGAAATCCCACTTCAGAACCCATACCGGGGAGAAGCCCTTCGCATGTGAAGTTTGCGATTATAAGTGTGCCCGCAAGGGAGACTTgaaaatccattttaaaaCCCATACGGGAGAGAAGCCGTATACTTGCGACATTTGCGGTTACAAGTTCGCTCAGAAAGGATacttcaaaattcatttaaggactcacactggcgagaaaccgtttgccTGCTATATTTGCAACTATAAATGCGCATACAAGGGCAGCTTGCGAACACATCTACGAACACACACGGAGGAAAAACCGTACGCCTGTGACAAACTGGTTAAATCCGAAGATCTCCATCATGCGatcgacattaaagaagaaTATGTATACCTCGAGTATCAATCGGACACCGAAGCCAAGCCACCTACCGTCTGGAAACCGTTCGCATGCGACGTTTGCGATTACAAATGCTCCCGTAAGGGGGATTTAAAGGTCCATTTGAAAATCCACAGCGGCCTGAAGCCCTACGCCTGCGAACTTTGCGACTATAAATGTGCGTACAAGGGAAGTTTAAAATCCCACATCAGAACCCAcaccggggaaaaaccgtacTCCTGCGAAGtctgcgattataaatgtacgGAGAAGGGCAGCTTGAAATCTCACTTACGAACCCACACAGGGGAGAAACCCTATATTTGCGGAGTCTGCGATTACAAGTGTGCACACAAGGGAAGTCTAAAATCTCACTTAATAATTCATTCCGGGGAAAAACCCTTTTCCTGTGGAATATGCGATTATAAATGCGCGCGTAAGgcagatttaaaaatccacTCGAAATGCCACTCTGGAGAGAAGCCATTCACCTGCGAAGTTTGTTTTGCCAAGTTTACCCACAAGGGTAGCTTAAAATATCACCTACGAACTCAtaccggggaaaaaccgtaTATGTGTggaatttgcgattataaatgcgCGCACAAGGGAAGCTTAAAATCCCATGCTAGAATACACTCCGGGGAGAAGCCCTACACTTGCGATatctgcgattataaatgtacgGAAAAGGGAAGTTTGAAATCCCACGTGAGAATTCATACCGGGGAGAAGCCCTTCTCCTGTAATATCTGTGGCTACAAATGTGGGCATAAAGGAagcttaaaaattcatttaagaaCCCACACCGGGGAGAGACCGTTCGCTTGCGATCTGTGCGATTACAAATGTATACTAAGGGGAAATCTAAAAATGCATTTGTTAACACACACTGGAGAGAAACCGTATACTTGTGAGGTCTGCGACTACAAAACTGCCCACAAGGGAAGCTTGAAAGCCCATTTGAGAATCCACACCGGAGAGAAGCCCTTCATGTGCGAACATTGCGACTACAAGTGCGCCCATAAAGTAAGCTTAAAAAGCCATTTGAAAACCCACAAGAcgagaaaagtgaaaaaaaatcgCAAGTGA
Protein Sequence
MKTEEQIEIKVEDLHHTYDIKEEKSTAVYLPDGECKSETEDKKFGCEICDYKCKMKRNLKVHLLTHSNEKPFTCAVCGYKCARKGDLKRHLVTHSNVKSFKCKICDYRCAHRGSLKSHSRTHTGEKPFACKFCDYKCTLGGNLKIHLRVHTGEKPYRCGICDYRCSHKGSLKSHLRVHTGEKPFGCEICDYRCSEKGSLKKHVRIHTGEKPYVCEVCDYKCTEKGSLKSHLRTHTGEKPYGCELCDYKSAHKRSLKNHLRSHSVEQEFIENIGVTDSQSNPPAKMFPCDICGYTCTSRGNLKMHLRTHTGEKPYMCAICDYKSAHKGSLKSHLRTHTGEKPFVCPICDYKTAHRVSLKAHFRVHSGEKPYVCEICDYRCIEKGSLKSHLFTHTGEKPFGCATCDYKCARKGDLKVHFKTHAANLQYIPDGKRFACQLCDYKCAHKASLRNHLKSHTGEKPYACNLCDYRCTLMGNLRIHTRVHTGEKPFSCEICDYRCSHKGSLRTHLRTHTGEKPFGCDICDYKCTEKGSLKKHVRIHTGEKPYGCEICNYKCSEKGSLKAHLRIHTGEKPYGCEFCDYKCAHKGSLKSHLRTHTGERPFSCEVCSYKCARKADLKIHLVIHTGEKPYGCAHCDYRCAYKASLKSHLRTHTGEKPFACEFCDYRCSEKGGLKSHVRTHTGERPYPCEICDYKCARKGDLKVHLKMHADDNPLPESLEKQFTCEICDYQTAHRSSLVSHVRIHTGEKPFSCQFCDYKCAHRGSLKTHVRIHTGEKPFTCNVCDYKCSHRGSLKTHLRIHTGEKPYACEVCEYRCTERGSLKKHLRIHTGEKPYQCEICDYKCTEKGSLKSHLRTHTGEKPYTCGICDYKFTQKGYFKIHLRTHTGEKPFQCHLCDYKSAHKGSLKSHFRTHTGEKPFACEVCDYKCARKGDLKIHFKTHTGEKPYTCDICGYKFAQKGYFKIHLRTHTGEKPFACYICNYKCAYKGSLRTHLRTHTEEKPYACDKLVKSEDLHHAIDIKEEYVYLEYQSDTEAKPPTVWKPFACDVCDYKCSRKGDLKVHLKIHSGLKPYACELCDYKCAYKGSLKSHIRTHTGEKPYSCEVCDYKCTEKGSLKSHLRTHTGEKPYICGVCDYKCAHKGSLKSHLIIHSGEKPFSCGICDYKCARKADLKIHSKCHSGEKPFTCEVCFAKFTHKGSLKYHLRTHTGEKPYMCGICDYKCAHKGSLKSHARIHSGEKPYTCDICDYKCTEKGSLKSHVRIHTGEKPFSCNICGYKCGHKGSLKIHLRTHTGERPFACDLCDYKCILRGNLKMHLLTHTGEKPYTCEVCDYKTAHKGSLKAHLRIHTGEKPFMCEHCDYKCAHKVSLKSHLKTHKTRKVKKNRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-