Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_963170105.1
Location
OY720624.1:82446001-82448583[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.12 1.2e+02 3.7 0.0 19 46 286 314 284 314 0.70
2 5 4.8e-10 5e-07 30.5 0.1 1 43 320 364 320 367 0.90
3 5 1.2e-11 1.2e-08 35.6 0.0 1 46 373 422 373 422 0.93
4 5 1e-10 1.1e-07 32.7 0.0 1 46 429 474 429 474 0.98
5 5 1.1e-06 0.0012 19.7 0.0 1 34 481 516 481 525 0.91

Sequence Information

Coding Sequence
ATGGACGATTACGATTTTAACGACCTTCAATCAgagtttgataattattttgggGATGATCTAATCGGAAGTGACGGCGAAGAAAACCCAGATGTggaaaaattttccaactgCGATACCGATGATGACAACCTCGATGAAGATGATAAGATGTACGAAATTGACGACATTAGTGTTCCAGAAGAAAACGACACCGAAACTTTAGGCcagataattttacaaattcaagGTGACTTTCAAAACTCCGTTTTGAATGATTTTTCCACAACTCAGTTGAAATTAAGCCCCGATCAAATCACAATTTTGGAGTGCTGCCGAAATTCTCAATTGAGAAGGTTGATTTTACTGAACAGATTGAAATCTATGCATTGTGTAGAACTCGCTAAGAGAGTTAAACAAGCCGAAAGCCTTTGTTGCGGAATTATCGATAAATTGAGAGTAAAAATGGCAAACAACGGTAAAGTTAGCAAAAGTTATCCGAATAATCTTGATGATGCTTATacttcaaatatttgtaaattgggATTTCCCTATTTTAAGAAATCCATTAACCACCCAACTCCCAAACTCAATTCAGACTTTTTCAAAAAGGTAGCCAATCGCGAACTGGTGAACACATCTTTCATCGATGGTAGACGCTGGATTCATAACGACCAAATATCTCTGTATGAATCGGTGTGTAAAAATTACCGTACTTACAGGAAAAACATTTTGCAGAAACAACTGAATTCTGCAAAAAAAGCTTATGGTGCGATTGCGAAACCTTCACTAagaactgaaattaaaaaattgaagaaacaaCTGAAagcaattgaaaatgaaacagAATACGTAGCACCACCGTTGGAAAACGAATTAGGAATTAATTGGTTATCGGTGATAAACGATTTGTACGACAGACATTCGGCTGTTGAATGCCAATCGTTTTGGCGGATATATTTACACCCGGATATTAACAAGAATAATTGGTCGAAAGAAGAAAATCAGAACATTCACTCCTTGGtgaaaaaatacaactttCAAAACTGGGACGCGATTGCAAAAGAACTCGGAACCAACCGAACTGGTTTTTTGGTAATAGTTCACTATTTTACCAAGCTgtgtgataaatttttaagaacaaGATTTTCACCTGAAGAAGATGAACAAATACTGAGTTTAGTGGAAGAGCAGCGTATGGGAGACAGGATACCCTGGTCGGCTATCGCTACACATTTTATTGGACGCTCCAAGCATCAACTTTATCATAGATATACGTATTATCTAATACcccaaaatattacaaaaggGAGCTTCACGGAAGCGGAAGACATACTCCTATGTTTTTTAATCGAGAAATTTGGTAAAGACTATACCGCAATTGCTAATATTATGAAGACTCGCACTCGCTTGCAACTAAGTAGCAGATACAGGAATCATCTGGAAACCATTAACTACAATCGGCTACCTTTTACCATCGAAGATGATCGTGAAATTATGAAACACGTTGAACAATTTGGCCCGACCAATTGGAAAGAGTTAGGAGATCGACTGCAAAAGGGGCGATGTAATGTGAAGGGGCGCTACCAAACCATAATAAAACATCTTAAAGACAATGTGGAGCTCGAGGATATTCGAAGATCCAGAAAACTGCTGTTTCAACGTACCCAGAGTGAACGTATCGAAAACTTCAATGGAGTTTTGAgcgaaataagaaaaaatgtcGACGGTATTCCCACTTTAAAAACAGTTGAACGCTACTTAGAGCGTTACCGATTAGAAAAGCAAAGCATGCAAGTGTGTAAAACATCCAAAGGAAACGAGCCAAGTGTGGTTGATCAACATTTGATCGAGTTCTTCGTGAAGATAAACCAGGATCAGAAGCAAACAGTTGTTAAGCCTTGTGAGATGGTTTCCACCGATTCTCTAAATCGCATCGTGAAATTGTTGTTGTTACTTGGTTCAAGGGAAACTTTGTTTGGTGAGGTTGATTTTCCCAAATTCCCAAAAGCAGATAATCATGATCTTATGgttgaagttaaaaatttgtaccaTCAGAAATATGCTCCTAAAGCCGGGTCATTTAGAGTTAACACAATTAAGGAAATTTTACCACCTACCATTTGTACCATGACTGGTTTACAAAATCTTTTTGTCAACTGCGAAGAAATGCAAGTGTTAACTAAGCCTGATCAACACAGCTTGGAATCATTGTTTTCGTTGCAAAATTTAACAGAAGTGGAATCGAAGCAAcgaagtttatttttgaatcgACTTTTGTCAGTCTTCAAATGGCCAATACTTTTATCTTTCAGTGATCCCTCCGAAAAAGTtacacaaaaagaaaaaatggaaGAAGACGAACTTATGGAAGTACCAAAGATCTTACAGGCTACAAGTAAGAAGCGCTTATTGGATGAAGATTCTGATGAAGATAAATGTGATGAAGATGGATGGAAGAACACAAAACTTGCAAAATCAAATACAATGGTTAAATATTATCCCGGTCGGGTGCGAGTCCCAATGATCTGTGACCGGAAGAACCAAAGTGCTCAATGTTTCTTCTTTTTGGGAACATGTCCACCTATTCGAAAAGTtatttga
Protein Sequence
MDDYDFNDLQSEFDNYFGDDLIGSDGEENPDVEKFSNCDTDDDNLDEDDKMYEIDDISVPEENDTETLGQIILQIQGDFQNSVLNDFSTTQLKLSPDQITILECCRNSQLRRLILLNRLKSMHCVELAKRVKQAESLCCGIIDKLRVKMANNGKVSKSYPNNLDDAYTSNICKLGFPYFKKSINHPTPKLNSDFFKKVANRELVNTSFIDGRRWIHNDQISLYESVCKNYRTYRKNILQKQLNSAKKAYGAIAKPSLRTEIKKLKKQLKAIENETEYVAPPLENELGINWLSVINDLYDRHSAVECQSFWRIYLHPDINKNNWSKEENQNIHSLVKKYNFQNWDAIAKELGTNRTGFLVIVHYFTKLCDKFLRTRFSPEEDEQILSLVEEQRMGDRIPWSAIATHFIGRSKHQLYHRYTYYLIPQNITKGSFTEAEDILLCFLIEKFGKDYTAIANIMKTRTRLQLSSRYRNHLETINYNRLPFTIEDDREIMKHVEQFGPTNWKELGDRLQKGRCNVKGRYQTIIKHLKDNVELEDIRRSRKLLFQRTQSERIENFNGVLSEIRKNVDGIPTLKTVERYLERYRLEKQSMQVCKTSKGNEPSVVDQHLIEFFVKINQDQKQTVVKPCEMVSTDSLNRIVKLLLLLGSRETLFGEVDFPKFPKADNHDLMVEVKNLYHQKYAPKAGSFRVNTIKEILPPTICTMTGLQNLFVNCEEMQVLTKPDQHSLESLFSLQNLTEVESKQRSLFLNRLLSVFKWPILLSFSDPSEKVTQKEKMEEDELMEVPKILQATSKKRLLDEDSDEDKCDEDGWKNTKLAKSNTMVKYYPGRVRVPMICDRKNQSAQCFFFLGTCPPIRKVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-