Basic Information

Gene Symbol
Arid2
Assembly
GCA_963170105.1
Location
OY720627.1:6666351-6685147[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-23 4.7e-20 72.5 0.0 1 89 15 101 15 101 0.95

Sequence Information

Coding Sequence
ATGGCCAAAATTCTTGATAAGGATCCCGTTTCCTACATCAAAGAGAAGGAAGGTTTCCTTCGGGACCTTCGAAACTTTCACGAAGCAAAAGGGACGCCGTTCCGTAGAGTCCCCACAATAAATGGCCACGAAGTTGACCTCTATCTTTTATATTCTTTGGTCGCCGCAGAAGGAGGATGGATtcagGTGAACGTGAACGAGGAATGGCCCGATCTCCTGGAGAAGTTGAATCTTCCCTCGAGCTGTATCAACGCTGCCGCTGGACTCAAGCACATATATTTGAGATTCCTGGACCGATGGGAAAAGGCTCATCGCTCTGGAGCACTTTTGGATTCAAGGCTCGAGGAAGAAGACGACAGGCACTACCGGTGGTCCGGAAAACAAACTCGTCACCACGTCCCAGTCAGTTACAACTATCAGCAACACAACATAGCCGaatccaCCCGAGATTACAATAACTTATCCACGGATTTATACAAGCAATCGGATTACGATCGTCTTGCGTTATCTCTCATATCATCTCTCCCGAACGAACAAGATTTTGCCATAAACGTGTGCACGCTTCTGTCGAACGACGGAAAACACACGTTAAAGTTAGAGAAATATCCGAGATTGGTGGATTACCTAATAGCCCATACGGGTGTCTACCATCACAGCTCTCTACGGCCCCTTTTCACTGGTTATTATCACAACATACGAAGGCAACCTCTGAACAACTTCTGGAAGATTTCTGTGCAGTACAAAGAATTTTTGGATCTCacaaacgaaataaattttatgcaaatagTGCGGGAAAGTGCGGAAGCGAAGAAGGACAGCAGTGTTCCAGAAGTATTGAACGATATAAAATGTGTGGTGGACGATTCGATCGGTTTGGTTATTGGTTCTCAGGAGaccaatttgaataataagttTAACGGCCAAAACATTGTTAGTGATTGTGAATCGGATTGTGAGCGGGATACGGACgacgaattgtttaatttgggTTGTAATTTAGGTACGCAAGATTACATTGGACAACGTGTGTTGCAAATAGctacaattttaagaaatttaagttttatcgAAGAAAATGTTACGTTTTTAGCTAAGAACAAAACTTTTGtacgttttttaattttgtgttctaGCGCCAGGTGGGGCGGTTTACATAACATGGGACTGGATATGCTTGGAAATATTGCCggtgaatttttaatcaaagaCTTGCAAAGTGATAgattaagtttttgtttgttgaaACTTCTGTCGCACGGTTTGCAAAGTGAAGATCGTACGTGTTGCATTGCATCGTTGGatgcattaaataaattaagccaAATAGAATCTAACGAAGACGTTCTAACAAAAACTCTCGAACCTATTGTATATCAAAAAGTTTGTTCGTTTTTAACGCTGCATGATGTTATGCTTTTGGTGTATACTCTAGAGTGCTTATATTCTTTGACGTCGTTGGGAGAACGACcttgtaatttaattgttaacatTCATGGTGTGGTGGACACCTTGGTGTCTTTGGTGACTGTAGAGGGAAAGAGTTACGGTCCTAAAGCGTGCATAGGGATGAAATTAGTTGAAACGGTGCCGGGTAATAGTGTGAATGTGACTACACAAGCGGCAAGCGTTACAACTTCGACTCCGGCCAGCATTGCCGCCGTTTCTACCAACACCACAACCTCCACAGCCATAACCACTTTGTCGTCGGTGTCAACAATTCAAGTTACTCCTACGAAGCCTTTAATGCCAGTGAATGCCAACAAGGCAACTCCTATTACACCTCAACGTATTATTATCACACCTTCGTCGTCTACCATTGTAACaacAACGCCGCCAACGGTAACGACGACTCAACAACTTACCCAAGTCATTACGTCACAACAATTAGTACAACAACAACACGCTCATCAGCAGGTAATACAAGAGAACGAACAATTTGCCTTGGCGTGGCTGCGTGCCACGTACGAACCCCTAAACAACAGTCGAGTTGAACAGCAGGAGTTGTACAAACATTATATAAATTCGTGCGCCAAAATTGGTAGGAGAGGTGTAATAGCTCCATTACATTTTCCTAGATGTGTTAGatCAGTATTTGGCGGAATGGTTGGTCCGAATCCAGTAAAATCGACGAATCCAAACGATGCTCAGTATTATGAAGGAATAAAGGTGCGAAATCAACCTCTTGTTATAAGTGTTCAATCTGTGTCTAATTTATCGACAACTCAATCTCCGATAAAAGGAGGCATTCGGCGTAAAGGTCAAAATGCTCCAACGAGTACCGTTTTAAATCAGACACCCGTTCCtgtatcaaattttgttccCGACAGCACCGACACCCCACCTCCGTCTCCCGCATCCCCGATTTTAAAAGCACAACTCAGCGCACCTTCAAAACCTCGAGAATCCACTGTTATTACTAGTCCCACTTATAAAGGCGATATGAAAAGTcagGTAATGGCGCATCCACATCTGAGCCAAGCTCTGTTAGGAAACACTACTAATAGTTCTACTACGAGTGCTGGACCCAGCAAAGAACCACAAACGGGTCAGAGCAATACTTCACTCATCAAAAGTTTGCTCGCTACTAAGGTAAACGACTGCATGACAACTATCAGCATGAAGAATTCCACGGACTGTCAATCTGTAGTGCAGGTTGCTGCGCGTCAACAGCAACAAAAACTGTTAGCGCAACAAACGACGAACAGTAAAACTTACACTACGGGGAcaaaaatattggataatGTGTCAAAAGTGTCGCGAATAAACGGTGCTCGACAATTATTTACAGACGACGTTATGGATTCCTCCGTAACGTCCACCGCTACAATGGGTTCGAATTTTAGTACGACAAAGCGAGAACCCCCTCAACCTCCACCACCACCATTGGCGCCTTTAAGTAACTCCAGTAGAATTACGACgttgaaaatggaaaatgacGATAGTAATTCCACCGGTAATAATTCGCTCGCATCGAGTAGTGGCATCAACATTGGAATTTCTTCGACCGAAGACGGCGAGAATTCATTGACGAGTTTTGAAGGGCTCCTTAACGGCGTTCCCAACATGGACAACACGTTGACATTAAACGACGATAGTAACTCAAAAGATTCGCAAACTTCAAGTGGGATTATTTCGAAAACGAAAACGTTGAGGCTGGCGGACTTGCTGGAAAAGAAGATTGATAACAAAGAACCGCCAATATTGAATGGAATGTTGGGTAAAGAATTGAGGATAGGCGAGAAGGGTTTGGAGTTGGTCGAAAATCACATCGAAAAGGCTTTGAGTAAAGAACCAGTGAAAAATAATGTGGAACACATAGAGAAACAAGGCACAAAACGGCCTTCAACTGAAGAAGTGTGCGatgtggaaaataaaaaactgcaTCTTACGTCAACTAGCAGTGTCAACGGTTGCGTAACTGCCGACTCGCCAGCACCAGATTCGGTTTCCAGTTCTTCAAATGATGAACCTACTGGTACTGTGTCGACCGCTGCAGCTAAGCTGTTTGCTGACATTGCTGCCGATATCCTGGAAGATGAAGAGGAGGAAATGATGCAGGAACAACAACAGCAAAGTGTGGAGGAATCAAATGTAGTGCAAATGTTGCATAATAATTCCGCGAATCAGCAAATATTCATGGATCAAAGTCAGTCTCAGATGATAGTCACTCAACCACGACAAATTTTGTTGTCGCAACCGGGACTTCAAACAACGAATCAAGTTGTTTTGCCTCCTGGAACCCAACTGAAACCCGGCCAAACTGTCATTGTTCAAAATACCGGCCAACAGAGAGCGCCAATGGTGCTACAACAATCGAACACTGGGCAATTTTTGCTATCTCAAGGCATTCAAGGTCAAATGCAACTCACTGCGAGCACTACACAGCCAGGCCAATATGTCTTACAAACTAGCTCCACTCAAGGTGCTTATGTTGTGGCACAACCGCAAACTGCCATGGTGCATGGTCAACCCCAAACTGTCTTGGTGGCACAAACCGCGCAACAGCAAGGAACCAACATGAAAACAATCATAATATTGCAACAACCGTCTGCTGGTAACGCGACTCATCATCAAAAACTTATGGTAACGCCTCAAGGTCAGCAGGTTATGGTAACGCAAATGCCAAGGCCTATTTTGCAAACTGCAACTAGTATCAACAATGTTTTGCCTACATCTTCCATCATAAAAGCAACTGCCAATACAACTATGGCTCAAACCATCATTGCTGCCAGTGAAAAGAAAGTGGAAGAGCCTAAACCTGTGCCCAAAGTGAAAATTGTGAGAGACGTTTCAACGCCATTTGTGTGTGAATGGGGAGAGTGTCAGATtgacACGAAATTTAAGTCTGCCAATCAGGTGTACATGCATGTGTGCGCGGTTCATTGTCCGGAATCGATTGATGAACTAACGTGTCAGTGGGAGCGGTGCGACAATATGAAGAGAAAGCGATTTTCTTTGATGACTCACATATACGATAAGCACTGCAACCTTGAGGCCATGAAACAAAGTCAAATAAAACGGAAGCAGCAATCTCAGAGTGGCAAAGTAGAAACGTTGACGCCCACACCCGCCACGCCCCATCCTGGTTACGCACCCGACGCAGCTTTGCACGCGATCAAGCGGCACGCCTTGGAGTTTGTGAATCCCAAGGAGTTACAGCAGAGAACAGCTACTAAGCCAGGTGCTGTGGTTGTTACTGCAACAGTGCCCAGAAGTGGGCCGCCCACTGTTGAGCAGGACGATAACGAAGGTCCAGTTACTAAGAGTATGAGACTTACAGCAGCTTTAATTCTTAGGAATCTCGTCATATAtagtaataattgcaaaagGTACTTACGACAATATGAAACTCATTTAGCGAACGTTGCATTGAGCAATGTGGAGTCGTCCCGAACTGTAGCTCAGATATTGTACGATATGAGCGACGCGAGCGTCAATCATAGGTGA
Protein Sequence
MAKILDKDPVSYIKEKEGFLRDLRNFHEAKGTPFRRVPTINGHEVDLYLLYSLVAAEGGWIQVNVNEEWPDLLEKLNLPSSCINAAAGLKHIYLRFLDRWEKAHRSGALLDSRLEEEDDRHYRWSGKQTRHHVPVSYNYQQHNIAESTRDYNNLSTDLYKQSDYDRLALSLISSLPNEQDFAINVCTLLSNDGKHTLKLEKYPRLVDYLIAHTGVYHHSSLRPLFTGYYHNIRRQPLNNFWKISVQYKEFLDLTNEINFMQIVRESAEAKKDSSVPEVLNDIKCVVDDSIGLVIGSQETNLNNKFNGQNIVSDCESDCERDTDDELFNLGCNLGTQDYIGQRVLQIATILRNLSFIEENVTFLAKNKTFVRFLILCSSARWGGLHNMGLDMLGNIAGEFLIKDLQSDRLSFCLLKLLSHGLQSEDRTCCIASLDALNKLSQIESNEDVLTKTLEPIVYQKVCSFLTLHDVMLLVYTLECLYSLTSLGERPCNLIVNIHGVVDTLVSLVTVEGKSYGPKACIGMKLVETVPGNSVNVTTQAASVTTSTPASIAAVSTNTTTSTAITTLSSVSTIQVTPTKPLMPVNANKATPITPQRIIITPSSSTIVTTTPPTVTTTQQLTQVITSQQLVQQQHAHQQVIQENEQFALAWLRATYEPLNNSRVEQQELYKHYINSCAKIGRRGVIAPLHFPRCVRSVFGGMVGPNPVKSTNPNDAQYYEGIKVRNQPLVISVQSVSNLSTTQSPIKGGIRRKGQNAPTSTVLNQTPVPVSNFVPDSTDTPPPSPASPILKAQLSAPSKPRESTVITSPTYKGDMKSQVMAHPHLSQALLGNTTNSSTTSAGPSKEPQTGQSNTSLIKSLLATKVNDCMTTISMKNSTDCQSVVQVAARQQQQKLLAQQTTNSKTYTTGTKILDNVSKVSRINGARQLFTDDVMDSSVTSTATMGSNFSTTKREPPQPPPPPLAPLSNSSRITTLKMENDDSNSTGNNSLASSSGINIGISSTEDGENSLTSFEGLLNGVPNMDNTLTLNDDSNSKDSQTSSGIISKTKTLRLADLLEKKIDNKEPPILNGMLGKELRIGEKGLELVENHIEKALSKEPVKNNVEHIEKQGTKRPSTEEVCDVENKKLHLTSTSSVNGCVTADSPAPDSVSSSSNDEPTGTVSTAAAKLFADIAADILEDEEEEMMQEQQQQSVEESNVVQMLHNNSANQQIFMDQSQSQMIVTQPRQILLSQPGLQTTNQVVLPPGTQLKPGQTVIVQNTGQQRAPMVLQQSNTGQFLLSQGIQGQMQLTASTTQPGQYVLQTSSTQGAYVVAQPQTAMVHGQPQTVLVAQTAQQQGTNMKTIIILQQPSAGNATHHQKLMVTPQGQQVMVTQMPRPILQTATSINNVLPTSSIIKATANTTMAQTIIAASEKKVEEPKPVPKVKIVRDVSTPFVCEWGECQIDTKFKSANQVYMHVCAVHCPESIDELTCQWERCDNMKRKRFSLMTHIYDKHCNLEAMKQSQIKRKQQSQSGKVETLTPTPATPHPGYAPDAALHAIKRHALEFVNPKELQQRTATKPGAVVVTATVPRSGPPTVEQDDNEGPVTKSMRLTAALILRNLVIYSNNCKRYLRQYETHLANVALSNVESSRTVAQILYDMSDASVNHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01293359;
80% Identity
-