Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963170105.1
Location
OY720624.1:65654146-65666094[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.9e-27 2.8e-23 82.9 0.2 1 89 297 382 297 382 0.94

Sequence Information

Coding Sequence
atgCAAGTAGACGACCCTCCTTATCTTTCCGTAGGCACTGCGGTGAGTGCCAAATATAAAGGTGCTTTTTGTGAAGCTAAAGTTTCAAAAGTGGTTCGGGTTGTGAAATGTAAAGTAACGTATAAAATGGGTCTGGGTACTGCTACCGTAAGTGATGAACAAATTAAAGGACTTTTGAGAGTGGGTCAATTAGTGCAAGCTAAACATTCGGATAAGAAAGAGTACGTTGATGCaactattacaaaaatacaagaCTGCAGTCAATACACAGTCGtttttgatgATGGCGACATTACCACTTTACGAAGAACTGCCCTGTGTCTTAAAAGTGGTCGTCACTTTAATGAAAGCGAAACTTTGGACCAACTTCCTCTCACACATCCAGAACATTTTGGTAATCCTGTAGTTGGCGGCAGGCGAGGACGTCGTAGTCGACAAGCAAAAGAAGATAGTAGTGAAGGCGAGGGAGAGGAAGAAAATGAACCTGATTTAGAAGTTTACACCATGGAAGTTGGTCGAGTCGTGTGTGTTGAAGCAAGTGataaaaaaagaagtaaaGATAATTGGTTTCCCGGTCTTGTAGTTATGCCTTCAGCGCAACTCACTGTTCGAATTAACATAAAGGATGAATTCTTAGTGAGATCTTTTAAAGATGGACGATAttACACAGTACCACAAAAGGAAGTTACCGAATTTAGTCGGGATATGGTGTCGAAAATTGAAAGCACATTTTTATCTGAAGCAGTGGAAAAGgcacttaaatatttagacaCCGATGAACTTCCTATTCATTGGGAACGTGATCTCCTTTTCTGCAACTCGATCCAGGTAGCCACTTCTGATTCAGATGATCGTTACACCGATAGTTCCGATGATGAAACTCCAGAAGAGAAAGATCATTTTGTAGCtcaactttataaatttatggaTGACAGCAATACACCGTTAAACAAAAGTCCTGTGATAGGCAACAAAGATGTAGATCTCCACCGACTTTTTCGAGTAGTACGAAAGTTAGGTGGTTACAATCGAGTAACAAATAAGAATAAATGGCGATCGGTAGCATTAAGACTTAAACTTACGAACAATCCAAACAATTACAATCAAGTCAAAttggtttacaaaaaattcttgCTTAGTTTTGAAGCATTTCATCGCACGTTAGGAGTTACAATGCTGAGTCATCCAAGAAATGCTAAGAAAAGTAGAGGACGAAATTTAATTCGAGATAAAGATCGTAGTACTCCCGTCAATAGTCCCAGACCGGACAAGGAAGATGAAACTGTTTTCCAAGAAAAGAAGGAGGAGGAAAAAGTGGAAGAAAAACCTAAACCTGTTAAAAAGAGCGAAATCAAGCAAAAAGAAGATGAAAAGAAAGTTAAAGAAATGACCGAAGTTAGTGATACTAATAGCAGTGATACTACAGACTTGTCTGAAATTGCATCTAATTCCAATGCCAAATTAAAACGTTCTGAATCAAAATCAAGTAAAGAACGGAAAGCCAAACCGCCTACAGGAGAAAAAGTTAAAGCTATGGTTGAGAAATTTGAGGAACAAATCAAGATTGAAGAtaataaagaagaagaaagggtACAGCAAACACGTTCGAAAAACCAAGTCGTGAAAACGAAAGAAAAAGAACAACTTCCTGAAAAACGATTACGTGATACTAAAACTCCGCTTCCTGAAATTGCTCCATTAAATAAAACACCTGttaaagttgttaaaaaaactgaagatgaaaaaaaaagaggTCGAAAGCGATTTAATGCCGATGATAAAGAAAAGACACCATCAGATAGTGGTACCGATACATCTGCGGTACCAGCGGTTAATGTTGGGGACAAACTGAAAGTTTACTATGGACCAACTCACGAATCAAAAGTCACATATGAAGCAAAAGTtgtggaaattgaaaattctgaCCCGATAAATCCTGTGTACATGGTTCACTACACCGGCTGGAATACTCGTTACGATGAGTGGATTAAGCCTATACGTATTGCTGAAAATCTTAGTGCCACTACCAAGGCCAAAAAACTTCGACAAAATTCATCAGCAAagAACAGTGCCACAAAGTCTTCCCCCAATAAAAGAGGCCGTCGAATGTCTATTACAGGTCGAAGTACAGTTATCGAACCACCACGTTCTACTACTCCATCAAGTGTAACTTCAACTTCCAGCAGAACAAAGAGTCCTGGTACTCCAGTCACTAGAGCTTCCCGTACCACTCGTCAAGgAGGAATGAATAGAAGAGCTAGGCGTACGTCTGTTCAAACTGATGCTTCAGATCATAATCATTCAGAATCGGATTCCGAAGGTACGGAAAGTGATTCTGAAActcttaaaacaaaaagtggAAGTAAATTAGAAGATAGCGATGAACAAGTAACcaaaaagaagttaaaatcGACACTTaGAGAAAAACGCATAAGAGAAGATGAAGAAacagaaaaagaagaagacgTCAGCTCTTCTGTTGAAATCAAACCCAAAAGGAATagaaaactaaagaaaatattaacaacAAAAGTTTCATCGGTTGAAAGTGATGATGATAGTGGAAGTCCACCTAAAGGAAGAGACTTTGATTTGATACAAATAAGATCCGAATTGAAAGGTTTTGTGAAAGCGGCTGCTATAGCCAATGCTGAATTGATCGATAAGGAAGTAATTTCTTCTGACGaatctattattttatctgACACCAAGGCAGTTTCTGATGCTACAGATACagaacctgaaaaattaaaagctggCTTACcaaaatcttcaagttctgATGATATTTATGAATTCAAAGAACCTGAACCTTTTGAATTCGAAACTCGGTCTAAATTGGTGGATGAAAAGGTTAAAAAACGCCTCATGCCTAGAATGTTCGAGGAAGTGGAAAAgcccaaaaagaaaaaaattgttactaaaGCTGAAGTTAAAGAAGAACCAGAAGTGGAAAAGAAACGTCCTAAACAGAGCACCAGCAAAAAAAGTGATGTAAATTCAGAAGAAGATGAAACCAGCAATGATTCCATTAGTAGTAGATTGCATGTTGAAGATCCGTTCGATAAGCTTGTAGAATCTCCATCTTTCCATAGTGGTAGGGAAAAACCTTCAAATAACGGCGACAAAcctaaatttgttaagtcCCTTAATTTAGATGAGCCTTTAAATTTGTTCCATAATTTAACAGAAAATGCTGAAGACGATAGTGGTGATCATCTGGATATATCAGATTCTGAAGAACCTCAAAATGAACCGCTCTTCACGCACAAGGAGCAACTATTTTCAGATCCCACATTCGGTAAAGCATCACCAGAACAACCAGGTTTAGATCCAATCTTTAGGGGATTTGTATCTAAGTCGGTAGATCGAAAGCACAAGGATAGCGACGATGATGATAGCATTAGGGAATCCATTCAAAATGTCATCAATCAAACTTCTTCTACCGATGATGATAGTAATgatcttttaataataaatcagccatttattgattttccaGAAAATATAGCAGAAGTTAAACCAAATATTCCTGCTGTAACTTTAAAAGACGTTACTTTGGAAGACAATCTAAAATGCGTGGAtatggaaattgaaaaaatggacGAAAAGATACAACCCATACCAAATCAAGATCTAAAAGTGTTTCCCGTAAAAGAAATATCTCCTGCTCTGCAAGAAACAAATAACAGTTTGATAGAATTAATATCGAAACCGCcagaaatattatcaaaattggaAGACGCTAAAGATATTGTCGTCAAAACTGGAACAAAAATTGCAGATACGTTATTGCAAAAGTTCAGTATGGTAAAATCTCCTTCAGAAAAATCTATGGACGAAGATTCTGGAAGTGACGAAGATAATAAACCGATTATAACTATGAAGCTTGAGGCAAAACAAGATAGTATTCAAAAGGAGGAAAACATAGCTAAAGCTGATGTAGCAAAATTCACTGAAACGAAAGTTGAACCTAAGATTAAACCTACGAAAAGTATTGAAAAACCTAAACCAcaagaagtaaaattaaaagcagtCGATGCTAAACCAAAAATTGTCGACAATAAACCAAAAGCTAAAGTTGAACCTGTCTTGGAAAGTAAAAAGCGTTCCAGGAAAATTGTCAGTCGTGAATTTATTGAAGATACAGACTCAGATTCTGATAGCACCGATTCAGGTGAACGATTAGTGATTGCACGTTCAGACGAAGAATCACAAACAAATTCATCTACTGATGTTAAAGTGGATGCTAAAGAGACTAGTGATGATGTTGTTAGTAATACAGCTGACAATTCCCAAGCGTCTTGcgattccaattttaaatttagtgatATTAAAGAGTCGGATGAGCTTTCTACATTAAAACCCGAAGCTGAAGCGGTTAAAGAAGAAGAACCGGATTCCCATTTACATTCTCTTTTGCTATGCGAAGAAACGATACCAGGTAGTCCTGCTCCTCAACCAGAAGTTTCTTCTGTTAGTGAAAGCAGGTCTAAACCTATATCTGTTTTGGAAATGCCCTTTGCTAGCGCACCTGGCACAAGCAATAATAGCAATAAGTCTGAATCAACTAAAGAAAGTAAGGTCTCAAGTAAGGAGAGAAATCGGCCTCCTCCTTTAGGTCTCTCTGCAGACAATCGCGAAAAGGATACTCAAAAAACTTTGACTGTATTAGACAACACTCCACCTTTAACACCTGAAAGTACAATTAGTAATTTATCACCAAGAGGtgacATTGGTGACTTATCTCCAAACACAGCAGATGATAGTTGCAAATCTGGTGAAGGAGAACCCGACTACAGCATTCAAAGACGTAGTTCTGCTAACAAGATTAGTTACAGTGAAGATGGAAGTTTAGATGCTATATTAAACGCCGACTCTAGCAcatcaaacaaaaaaagtaaagatGCTGCTTCAGTATGCAGAAAACGACGGAGATCTTGTAAAGCTACAGATGAGGTACCTGCAAAACGAGgtagaaaacctttaaatcGTTCTCGCCACACAAGTGACAGTGATGACACTACATTTGATGTACCAGAGCAGTCGCTCATGTCCAATGCAATGTTAAGTGGCAGTTCTgctattgaaaatcaaatggCTCGTTCTCCAAAATCAAAGTATAATTTCTTGGTTGATTTAGATTCCATTATAGACAGTAACGAAAGAATTGCAATgctgcaacaaaaaatgcaaGAAGTAAGGACAACTTATGCTATGGTTAAAACTCGATTGGCAGCTAtcgaaagaagaagaaagaaattaaGAAGAAGGGAAAGAGAAGCAAAAATGGCCAAGCAAGAATCTCAAAACACTTGA
Protein Sequence
MQVDDPPYLSVGTAVSAKYKGAFCEAKVSKVVRVVKCKVTYKMGLGTATVSDEQIKGLLRVGQLVQAKHSDKKEYVDATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRSRQAKEDSSEGEGEEENEPDLEVYTMEVGRVVCVEASDKKRSKDNWFPGLVVMPSAQLTVRINIKDEFLVRSFKDGRYYTVPQKEVTEFSRDMVSKIESTFLSEAVEKALKYLDTDELPIHWERDLLFCNSIQVATSDSDDRYTDSSDDETPEEKDHFVAQLYKFMDDSNTPLNKSPVIGNKDVDLHRLFRVVRKLGGYNRVTNKNKWRSVALRLKLTNNPNNYNQVKLVYKKFLLSFEAFHRTLGVTMLSHPRNAKKSRGRNLIRDKDRSTPVNSPRPDKEDETVFQEKKEEEKVEEKPKPVKKSEIKQKEDEKKVKEMTEVSDTNSSDTTDLSEIASNSNAKLKRSESKSSKERKAKPPTGEKVKAMVEKFEEQIKIEDNKEEERVQQTRSKNQVVKTKEKEQLPEKRLRDTKTPLPEIAPLNKTPVKVVKKTEDEKKRGRKRFNADDKEKTPSDSGTDTSAVPAVNVGDKLKVYYGPTHESKVTYEAKVVEIENSDPINPVYMVHYTGWNTRYDEWIKPIRIAENLSATTKAKKLRQNSSAKNSATKSSPNKRGRRMSITGRSTVIEPPRSTTPSSVTSTSSRTKSPGTPVTRASRTTRQGGMNRRARRTSVQTDASDHNHSESDSEGTESDSETLKTKSGSKLEDSDEQVTKKKLKSTLREKRIREDEETEKEEDVSSSVEIKPKRNRKLKKILTTKVSSVESDDDSGSPPKGRDFDLIQIRSELKGFVKAAAIANAELIDKEVISSDESIILSDTKAVSDATDTEPEKLKAGLPKSSSSDDIYEFKEPEPFEFETRSKLVDEKVKKRLMPRMFEEVEKPKKKKIVTKAEVKEEPEVEKKRPKQSTSKKSDVNSEEDETSNDSISSRLHVEDPFDKLVESPSFHSGREKPSNNGDKPKFVKSLNLDEPLNLFHNLTENAEDDSGDHLDISDSEEPQNEPLFTHKEQLFSDPTFGKASPEQPGLDPIFRGFVSKSVDRKHKDSDDDDSIRESIQNVINQTSSTDDDSNDLLIINQPFIDFPENIAEVKPNIPAVTLKDVTLEDNLKCVDMEIEKMDEKIQPIPNQDLKVFPVKEISPALQETNNSLIELISKPPEILSKLEDAKDIVVKTGTKIADTLLQKFSMVKSPSEKSMDEDSGSDEDNKPIITMKLEAKQDSIQKEENIAKADVAKFTETKVEPKIKPTKSIEKPKPQEVKLKAVDAKPKIVDNKPKAKVEPVLESKKRSRKIVSREFIEDTDSDSDSTDSGERLVIARSDEESQTNSSTDVKVDAKETSDDVVSNTADNSQASCDSNFKFSDIKESDELSTLKPEAEAVKEEEPDSHLHSLLLCEETIPGSPAPQPEVSSVSESRSKPISVLEMPFASAPGTSNNSNKSESTKESKVSSKERNRPPPLGLSADNREKDTQKTLTVLDNTPPLTPESTISNLSPRGDIGDLSPNTADDSCKSGEGEPDYSIQRRSSANKISYSEDGSLDAILNADSSTSNKKSKDAASVCRKRRRSCKATDEVPAKRGRKPLNRSRHTSDSDDTTFDVPEQSLMSNAMLSGSSAIENQMARSPKSKYNFLVDLDSIIDSNERIAMLQQKMQEVRTTYAMVKTRLAAIERRRKKLRRREREAKMAKQESQNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01291251;
90% Identity
iTF_00267911;
80% Identity
-