Basic Information

Insect: Cantharis flavilabris
Gene Symbol: ci
Assembly: GCA_949152465.1
Location: OX424437.1:46954028-46959023[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.003 0.19 13.3 0.7 3 23 288 311 286 311 0.94

2 5 0.29 19 7.1 0.1 3 23 321 346 319 346 0.79

3 5 0.00036 0.023 16.2 2.9 1 23 352 376 352 376 0.98

4 5 0.00064 0.041 15.4 0.4 1 23 382 407 382 407 0.97

5 5 1.5e-05 0.00096 20.6 0.3 1 23 413 438 413 438 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.003	0.19	13.3	0.7	3	23	288	311	286	311	0.94
2	5	0.29	19	7.1	0.1	3	23	321	346	319	346	0.79
3	5	0.00036	0.023	16.2	2.9	1	23	352	376	352	376	0.98
4	5	0.00064	0.041	15.4	0.4	1	23	382	407	382	407	0.97
5	5	1.5e-05	0.00096	20.6	0.3	1	23	413	438	413	438	0.97

Sequence Information

Coding Sequence: ATGTGCGTTGGTCGGCGTTTGGTTAATTATAAACATCCGAATATTGGTGCAACAAGAAACATACGTCACACATGTGTGTGTGTATACAATCGTCCAAATGAATCACCAAACTTTCCCACAATTTGCCAAAACGACTACGATCAACATGACATGCCCCTTAATTCTTTGCCATACGGAACGCCCGTCATCTTGAGATGTATTGGTTTGTCTCCTGAATATCTGACATCTAGAGGGCTCACCGAGTTACATCCGGCGTCGACGTTGGCTAGCAGCGATTTTCCATTTAGTTTAGACGGATCCCGTTTAGGCAACTCgcgtccgggaagtctgaggcaGTCACGCAAAAGAGCTCTCTCCTCGTCGCCGTATTCGGACTCCTTCGACATCAACTCGATGATCCGTTTCTCGCCAAATTCCTTAGCGTCGATAGTAAATGGTTCGAGATCGTCGAGCGCAAGTGGTTCCTATGGACACTTATCGGCAGGCGCCCTTAGCCCTGCTCTTAGCGCGGTCCACCCAAGCATGCATTTGCAACAACTCCAAGCGCACTTAATAAGAAGCGCAGGATCTCTGTTACCTCTACCTCCAACATCAGCACCTCCCCACCCCATGTACTCTCTTCCCCACCATCCCCTACACACATCAAGCGtacaaaacatttcaaaaacCGACACACTCACCGACGTTCGCAAAAAATcagaaatatcaaatttaaccCTATTAGAAGATTCAAACAAAACCAAGGCTCGTGCGAGAAAAGAATCCGTAAATTTGGGAGGACAACACTGCGTGACATCTTCGGAAGGCCCAGGCGATCAAGCAGATCTCAAAGACGAACCCGGTGATTTTATAGAAACAAATTGTCATTGGAAAGACTGCTCGACTGAATTTCCCACTCAAGATGATCTCGTTAAGcacATCAACAACGACCACATCCACGCAAACAAAAAGTCGTTTGTTTGTCGATGGGAGGGTTGTTCCCGTGCGGAAAAACCTTTCAAAGCGCAATACATGCTGGTGGTGCACATGCGGCGTCACACGGGAGAAAAACCGCACAAATGCACTTTTGAAGGTTGCTACAAGGCGTACTCGAggttggaaaatttaaaaactcactTGAGATCCcacaccggcgaaaaaccataTACCTGCGAATATCCCGGCTGTTCCAAAGCTTTCAGCAACGCATCTGATCGAGCTAAACATCAAAACAGAACGCACAGTAACGAGaaaccGTACGTTTGCAAAGCTCCCGGATGTACAAAGCGATACACCGATCCGAGTTCCTTGCGTAAACATGTCAAGACGGTGCACGGCGCGGACTTTTATGCGAATAAAAAACACAAGGGTATCGACGGTCCAAACGACGACGGCTCAGCCGGAATAGATTCTAGTCCGAGAAGCGAAGACATGCAAAGTCACAAGACCATGAGTTTGAGTAGTCCCAGCGTCAAATCTGAATCGGATGTAAATTCTCCTGGTCAACAGCACGGATCGCCGTTAGGAGTCACGCAATTGGCCGGTGGATTCAACGACGACTTTTCAAACGAAACAATTTCAACAGTACAAAGAAACGGGCCACTCGACGATCCGGCTTGGCCTTACGATGCCGAAGACTTGGAAATCGAAGATTTACCTGAGGTTTTGCGAGCAATGGTTGGGATCGGAACGGAGCGAGGCGGTGTAGCTATAACTGGACCGACAAGTAGAAACCGGATTAAACCGAGACTTCAGAATAAATCCGTGGTTCTTCCCAATTTAACGCCGATTCAGCGTAAAAATATAGGAATCACGGATTTAAACAGAAGAATAACAGATTTAAAAGTTGAAGGAGTGACTGGTttagtacaaaataaaaatcaagtgAGCGATTTACAACATCGTCTTCAAAATTCTGGAAACACTCAAATTCCCATTAGACGAGACAGCAATTCCACTGTTAGTTCCTATTATGGAAGCATGCGAAGTGCAGATATGAGCCGGAAAAGTAGTCTTGCATCACAAGCTTCCAGTATGAAACCGAGCACGGGAGGTGGTCCCAGTTCGTTCTACGATCCAATTTCGGCAGGAAGTTCGCGTAGGTCAAGTCAACTATCCACTGCAAATGGAGGTGGCGGTATCAGTCTACCACCACCGCCCCCCTCACAATTACTGGCAGGACAACTGCAGAGGTTACAAACTTTACCTCCCACTACGGCAGCAAGTTCGGGAAACCTAGTGTTGCAAactCAGGATATGTCGCTGCAACACACGGCTATGCAGCAAGCGTGGTTGTCCAATAAACTTCCTGAAAATTCCGTTTCAAATTCCAACACCTCCACAATAACAGACGGTCGTCGTTTATCCGAACCCAGTCAAACCAACACCAACAAGAAGAGTCCGCCACCTCGACCGGCATCGGTAACGCTCTCTCCGCTGAAGGGTTCGGTGAGTTCAAGTGAACTGCATCCAAATCAAGCAGTGGTTTTGGACGAAGTGGGCGAAGGAGAGATGGTAGAAAATAAACTCGTCATTCCAGACGAAATGGTGCATTATTTAAATCAAGTAGCCGATACGAATCCATCCGATTTTGCTACCTCGATGTCTTGGCAAGAGTCGTCCCCTCAGCCAGTCCCACCCAACCTACCAAAGCCAGTCGGCAACATTCCGCAATCTCCCTCAAATTATCTGAATAGCAATATGAGCTCTCCTCACATGCAACAGATGGTACATTCGCCAGCATCGAATTACGGAAACGTCCAAAATCCGTTAATGTCGCCAGGAATGATGCATTCACCGATGAACCAAATGGTTCCTTCGAGTAATCTCAGTCAAATGATGCTTTCGCCGGCTTCGAATCAAATGGTACCTTCGCCTCCGGCCAACTTAAATCAAATGGTTCACTCTCCGATGCCACAGTCGCCTCAGCAAATCAGATGCCACTCACAAATGATGTCGCCAAATTCGCCCAGCATCCAAATGATGCCGCCATCTCCAAACTGCAACATGATGCCACAGATGGTTCATCAAAACGTACAACAAAATTGCTACAATCAACCCCAACCCCACAACGTTTGCTACGTGCAGCACAGAAATACGACGTGGGAAAACAACGGCCAAATGTTGCAGAATCGAATCTGCCACAACCAGAGCCAAGTACAAAACATGTGCCATACCACGGCAAACTACGGTAACTGCAGACCGCAGCAGCCCAACAACGGCTTCGTTGCGCCTAATCAATGCTCCAACCACATGTACCCCATGTGCAACTCCAACACCTTCATATCGAGCAATTGCCAACAGAAACACGTCACCGCCTACCCGTGTAACAACACGCAGAACAATTTCAGTATGTGCGTTACGGGCGAACCGATGATGTCCCCAAACGTTGCAGCGCCGGCACCTACAGAAATGGTGACCCAATTACAACCGGCGCAAATGGTGAGACCCTGCTCTCACGTAGATCAAAATTGTTTCAGACACCAATTCAACTGTGTTCCAACCTGTGCGTGTACAAAAAATAAAGTGTACAACGAAACTACAAAGTGCTTCCATCAGTGTACGCTGACCAATTCTGAAATTCAGTGCAAAGACATCTCCCAATCGCAGTTATCCCCGAGCGTGAAGCCAACCGGTGCCGGTAGTACAAACGTGCAAATGAAACAAGACACCTATCAAAGAACTTTAGAATATGTTCAAAATTGTCAATCGTGGGTGAGTAATGCTGACGTCACGAGTAGTACTCATCCCAAAGAAACGGGGGGCGACAAAACCTCGTCTAATATGGTCATCAACGACATGACATCATCCCTTAGTTCCTTACTCGAGGAAAATCGTTACTTACAAATGAtacaataa
Protein Sequence: MCVGRRLVNYKHPNIGATRNIRHTCVCVYNRPNESPNFPTICQNDYDQHDMPLNSLPYGTPVILRCIGLSPEYLTSRGLTELHPASTLASSDFPFSLDGSRLGNSRPGSLRQSRKRALSSSPYSDSFDINSMIRFSPNSLASIVNGSRSSSASGSYGHLSAGALSPALSAVHPSMHLQQLQAHLIRSAGSLLPLPPTSAPPHPMYSLPHHPLHTSSVQNISKTDTLTDVRKKSEISNLTLLEDSNKTKARARKESVNLGGQHCVTSSEGPGDQADLKDEPGDFIETNCHWKDCSTEFPTQDDLVKHINNDHIHANKKSFVCRWEGCSRAEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCYKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGADFYANKKHKGIDGPNDDGSAGIDSSPRSEDMQSHKTMSLSSPSVKSESDVNSPGQQHGSPLGVTQLAGGFNDDFSNETISTVQRNGPLDDPAWPYDAEDLEIEDLPEVLRAMVGIGTERGGVAITGPTSRNRIKPRLQNKSVVLPNLTPIQRKNIGITDLNRRITDLKVEGVTGLVQNKNQVSDLQHRLQNSGNTQIPIRRDSNSTVSSYYGSMRSADMSRKSSLASQASSMKPSTGGGPSSFYDPISAGSSRRSSQLSTANGGGGISLPPPPPSQLLAGQLQRLQTLPPTTAASSGNLVLQTQDMSLQHTAMQQAWLSNKLPENSVSNSNTSTITDGRRLSEPSQTNTNKKSPPPRPASVTLSPLKGSVSSSELHPNQAVVLDEVGEGEMVENKLVIPDEMVHYLNQVADTNPSDFATSMSWQESSPQPVPPNLPKPVGNIPQSPSNYLNSNMSSPHMQQMVHSPASNYGNVQNPLMSPGMMHSPMNQMVPSSNLSQMMLSPASNQMVPSPPANLNQMVHSPMPQSPQQIRCHSQMMSPNSPSIQMMPPSPNCNMMPQMVHQNVQQNCYNQPQPHNVCYVQHRNTTWENNGQMLQNRICHNQSQVQNMCHTTANYGNCRPQQPNNGFVAPNQCSNHMYPMCNSNTFISSNCQQKHVTAYPCNNTQNNFSMCVTGEPMMSPNVAAPAPTEMVTQLQPAQMVRPCSHVDQNCFRHQFNCVPTCACTKNKVYNETTKCFHQCTLTNSEIQCKDISQSQLSPSVKPTGAGSTNVQMKQDTYQRTLEYVQNCQSWVSNADVTSSTHPKETGGDKTSSNMVINDMTSSLSSLLEENRYLQMIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00928174;
90% Identity: iTF_01294476;
80% Identity: -