Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:3716623-3717714[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00087 0.055 15.0 5.4 1 23 121 143 121 143 0.98

2 9 3.3e-06 0.00021 22.6 7.3 1 23 149 171 149 171 0.99

3 9 3.1e-05 0.002 19.6 1.2 1 23 177 199 177 199 0.98

4 9 0.0003 0.019 16.5 2.7 1 23 205 227 205 227 0.99

5 9 0.00014 0.0089 17.5 5.1 2 23 234 255 233 255 0.97

6 9 0.00029 0.018 16.5 4.4 1 23 261 283 261 283 0.97

7 9 2.1e-05 0.0013 20.1 6.2 1 23 289 311 289 311 0.99

8 9 4.9e-05 0.0031 19.0 3.3 3 23 319 339 317 339 0.98

9 9 0.24 15 7.3 0.5 8 23 343 358 342 358 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00087	0.055	15.0	5.4	1	23	121	143	121	143	0.98
2	9	3.3e-06	0.00021	22.6	7.3	1	23	149	171	149	171	0.99
3	9	3.1e-05	0.002	19.6	1.2	1	23	177	199	177	199	0.98
4	9	0.0003	0.019	16.5	2.7	1	23	205	227	205	227	0.99
5	9	0.00014	0.0089	17.5	5.1	2	23	234	255	233	255	0.97
6	9	0.00029	0.018	16.5	4.4	1	23	261	283	261	283	0.97
7	9	2.1e-05	0.0013	20.1	6.2	1	23	289	311	289	311	0.99
8	9	4.9e-05	0.0031	19.0	3.3	3	23	319	339	317	339	0.98
9	9	0.24	15	7.3	0.5	8	23	343	358	342	358	0.89

Sequence Information

Coding Sequence: ATGAGCAAGCTGGTGGTTTCAGAAGAATTAGAAGCAGTTAACATGGATATCAAGCTGGAAGACTTCCATCATTCCATTTTCATCAAAGAAGAGACTTCCATAATGGAGGACAAGGTATTTTCGGAAGAATGGAAAAATGAgggcaaaaaaatcaaaattgaaaaaatggaaatttttgatatcaaactagaagatttgcatcattccatcgacatAAAAGAGGACACTTCTATCGATTGCTTCCAAATGGATCAAGAGTGCAAGTCACCAATATGCAAAAAAGTTGAATGTCGGGATGGTGATGGTAATAGCATATTGGAGCATCTGAGGCAGGCAGAGGTATATTCCGGCAAAAAACCGTTTGAATGCAACCTGTGCGATTATAAATGCGTTCGCAAAACTCACCTGAGAGACCATTCACGAATTCACaccggtgaaaaaccatttaagtgcaaaatttgcgattacaaatgttCGCAGAAAAGTCATCTGAATAAACATTTGCGAAtccatactggcgagaaaccgttcgCATGCGACATTTGCAGTTATAAATCTGCGCAAAAAGGCCATTTGAAAGCTCacttacgaactcataccggagaAAAACCATTTCAGTGCAAAATTTGCAGCTATAAATGCGCTCTAAGCAGCTCTTTGAGAACCCACGTACGGATCCATACAGGCGAAAAAACGCTGAAATGTGACATTTGCGACTACAGGTGTTGTCAAAAGAGTAAATTGACGGACCATTTACGAATTCACACCGGAGAGAAACCATTTGCGTGTAATTTCTGCCAATACAAGTGTTCCCAGAAAAGCCAGTTGAAAGGACATGTACGGACCCATACCGGAGAAAAACCATATGAATGCAACATTTGCGGTTATAAATCTTCTCACCGAAGTCATTTGATACATCATTTACGAAGTCATACCGGTGAGAAACCGTTTGgttgcaaaatttgcaattacaGATGCTCTCGAAAAGATCAACTGAAACTTCATTTACGAGTTCATACAGGCAACAAACCGAGTTCACGgagaaaagttttgaaaaaacacaTTCGAACTCATGAAGCTCAAAAAACGTAG
Protein Sequence: MSKLVVSEELEAVNMDIKLEDFHHSIFIKEETSIMEDKVFSEEWKNEGKKIKIEKMEIFDIKLEDLHHSIDIKEDTSIDCFQMDQECKSPICKKVECRDGDGNSILEHLRQAEVYSGKKPFECNLCDYKCVRKTHLRDHSRIHTGEKPFKCKICDYKCSQKSHLNKHLRIHTGEKPFACDICSYKSAQKGHLKAHLRTHTGEKPFQCKICSYKCALSSSLRTHVRIHTGEKTLKCDICDYRCCQKSKLTDHLRIHTGEKPFACNFCQYKCSQKSQLKGHVRTHTGEKPYECNICGYKSSHRSHLIHHLRSHTGEKPFGCKICNYRCSRKDQLKLHLRVHTGNKPSSRRKVLKKHIRTHEAQKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271817;
90% Identity: -
80% Identity: -