Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:38784335-38786056[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0015 0.096 14.3 3.1 1 23 103 125 103 125 0.97

2 15 0.04 2.6 9.8 3.6 1 23 131 153 131 153 0.95

3 15 0.00011 0.0069 17.9 3.0 1 23 159 181 159 181 0.97

4 15 0.0087 0.56 11.9 3.9 1 23 187 209 187 209 0.97

5 15 0.00089 0.057 15.0 2.1 2 23 216 237 215 237 0.96

6 15 0.022 1.4 10.6 5.5 1 23 245 267 245 267 0.98

7 15 0.55 35 6.2 3.0 2 23 274 295 273 295 0.95

8 15 0.0011 0.073 14.7 3.4 1 23 301 323 301 323 0.97

9 15 0.00042 0.027 16.0 1.3 1 23 329 351 329 351 0.99

10 15 0.019 1.2 10.8 3.0 1 23 357 379 357 379 0.98

11 15 0.00018 0.011 17.2 3.1 1 23 385 407 385 407 0.96

12 15 0.00095 0.061 14.9 3.5 1 23 413 435 413 435 0.97

13 15 0.0094 0.6 11.8 2.9 2 23 440 461 439 461 0.96

14 15 0.035 2.3 10.0 2.2 1 23 467 489 467 489 0.90

15 15 0.0068 0.44 12.2 2.1 1 23 495 517 495 517 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0015	0.096	14.3	3.1	1	23	103	125	103	125	0.97
2	15	0.04	2.6	9.8	3.6	1	23	131	153	131	153	0.95
3	15	0.00011	0.0069	17.9	3.0	1	23	159	181	159	181	0.97
4	15	0.0087	0.56	11.9	3.9	1	23	187	209	187	209	0.97
5	15	0.00089	0.057	15.0	2.1	2	23	216	237	215	237	0.96
6	15	0.022	1.4	10.6	5.5	1	23	245	267	245	267	0.98
7	15	0.55	35	6.2	3.0	2	23	274	295	273	295	0.95
8	15	0.0011	0.073	14.7	3.4	1	23	301	323	301	323	0.97
9	15	0.00042	0.027	16.0	1.3	1	23	329	351	329	351	0.99
10	15	0.019	1.2	10.8	3.0	1	23	357	379	357	379	0.98
11	15	0.00018	0.011	17.2	3.1	1	23	385	407	385	407	0.96
12	15	0.00095	0.061	14.9	3.5	1	23	413	435	413	435	0.97
13	15	0.0094	0.6	11.8	2.9	2	23	440	461	439	461	0.96
14	15	0.035	2.3	10.0	2.2	1	23	467	489	467	489	0.90
15	15	0.0068	0.44	12.2	2.1	1	23	495	517	495	517	0.98

Sequence Information

Coding Sequence: ATGTCGCAaagttatttatataattcCCACGTTATGAAAAATTACTTGCTTATTAAAGACGAACCCATAAGATCGGAGAAAGATGATGGTACTTTTAATAAACTCGCCACCAAGGAAGGTTTGTCTACAAgAAACATCGTACCTTTCTGGAAAATCTTCATCGAAGAAAAACACAACgagaataattttcaaaatcaacattCAATTGTTATAAAAGAAGAACGTCCTGAGCGACTGAAACAAGACGATACTTTAGTAAGGAATGAATTGAATTTGTCTTGGCAAAATCCAAAATCGGGCAAACCGTTCACATGtgatagttgtaattttaaatgttcgcAGAAAAGCAATCTACTTCAGCATTTAGTAATTCACACTGGGGAGAAGCTGTTTGCTTGcaagttttgtgattttaaatgttttgaaaaaagtaACTTGGGTCAACATTTGAAAATTCATACCGGTGCTAAACCATTTGCGTGTGAATTTTGCGATTACAAATGCGCATACAACAGCAGTTTGCAGAAGCATGTGAGGACACACACGGGTGAGAAACAGTTCACTTGTGAAATTTGCAGCTATAAATGTACTAAACGTAATTATTTGGATAAGCATATGAGTGCTCATACAGGTGTAAAACCGTGGACTTGTGAAggttgcgattataaatgtgcaacGAAAGCTCAGCTGCGGTCTCATTCAAAACGACACACCATTGACGATGAAAAACCATTTTCCTGCGAATATTGTGATTACAGATGTCTAACCAAAAGCAGCCTGAACATTCATCACAAGATTCACTCGAACGAAGAACCACTCGTATGTGACATTTGCAGTTATCGATGTTATTACAAAAGAAGGTTCAAGGAACATTTAACAATTCATACCGATAATAAACCGTACGCCTGTGATACTTGCAATTACAAGTGTTTTCGTAGACGAAATTTAGAACAGCATGTAAGAgttcatactggcgaaaaaccctACGAGTGCACTTTTTGTGATTTCAAGTGTGCATATAATGGCGGTTTACAAATTCACATCAGAATGCATACCGGGGAGAGACCTTTCGTTTGCAATACGTGCGATTTTAAAACCACACGGAGAGATGTACTGCACAACCATTCAAGGATTCACAGCGGAGAAACACCATTTGAATGTATACATTGCGAATATAAGTTTTCACGAAAAGATCAACTACAACAACATCTTAAAATCCATACCGGCGAGAAGCCTTTCGCTTGCGATACGTGCAATTTTAAATCTACATTTAAACGTAACCTAACACGACATTTAAAAACCCACGAAAAACGATTGTCGTGTGaagtttgtaattttatatgttCTCGGAAAGGTGTGTTACACCAACACATGAAAATTCATAATGGTGAAAAAGTGTTTGCATgtagaaattgtaattttatgtgtGCTCGGAAAGATCAGTTACAGCAGCACTCAGTGTTGCAtaccggtgagaaaccatttgttTGCGAATTTTGTGATTTCAAGACCATATTCAAACGTAATCTAATACGACACTTTAAAATTCATGTTGCGCATCAACTAGTTTGA
Protein Sequence: MSQSYLYNSHVMKNYLLIKDEPIRSEKDDGTFNKLATKEGLSTRNIVPFWKIFIEEKHNENNFQNQHSIVIKEERPERLKQDDTLVRNELNLSWQNPKSGKPFTCDSCNFKCSQKSNLLQHLVIHTGEKLFACKFCDFKCFEKSNLGQHLKIHTGAKPFACEFCDYKCAYNSSLQKHVRTHTGEKQFTCEICSYKCTKRNYLDKHMSAHTGVKPWTCEGCDYKCATKAQLRSHSKRHTIDDEKPFSCEYCDYRCLTKSSLNIHHKIHSNEEPLVCDICSYRCYYKRRFKEHLTIHTDNKPYACDTCNYKCFRRRNLEQHVRVHTGEKPYECTFCDFKCAYNGGLQIHIRMHTGERPFVCNTCDFKTTRRDVLHNHSRIHSGETPFECIHCEYKFSRKDQLQQHLKIHTGEKPFACDTCNFKSTFKRNLTRHLKTHEKRLSCEVCNFICSRKGVLHQHMKIHNGEKVFACRNCNFMCARKDQLQQHSVLHTGEKPFVCEFCDFKTIFKRNLIRHFKIHVAHQLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -