Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:9167726-9169564[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0032 0.21 13.2 0.3 1 23 60 82 60 82 0.97

2 19 6.1e-05 0.0039 18.7 5.8 1 23 88 110 88 110 0.99

3 19 0.13 8.4 8.2 0.8 1 23 116 139 116 139 0.94

4 19 1.6 1e+02 4.7 3.4 1 23 163 185 163 185 0.95

5 19 0.62 39 6.1 0.6 5 23 195 213 194 213 0.93

6 19 0.0056 0.36 12.5 1.4 2 23 220 242 219 242 0.96

7 19 0.43 28 6.5 3.7 1 23 248 270 248 270 0.97

8 19 9.1e-05 0.0058 18.1 0.5 1 23 276 298 276 298 0.97

9 19 0.0079 0.5 12.0 0.4 1 23 304 326 304 326 0.97

10 19 1.9e-05 0.0012 20.2 0.6 1 23 333 356 333 356 0.97

11 19 0.22 14 7.5 2.1 1 23 365 388 365 388 0.93

12 19 2.5 1.6e+02 4.1 2.5 1 23 392 414 392 414 0.96

13 19 0.00017 0.011 17.2 4.4 1 23 420 442 420 442 0.98

14 19 0.029 1.8 10.2 0.5 1 23 448 470 448 470 0.97

15 19 0.0021 0.13 13.8 4.6 1 23 476 498 476 498 0.98

16 19 0.0011 0.07 14.7 1.4 1 23 504 526 504 526 0.98

17 19 0.00072 0.046 15.3 4.0 1 23 532 554 532 554 0.99

18 19 0.0042 0.27 12.9 0.5 1 23 560 582 560 582 0.97

19 19 0.00035 0.023 16.3 2.2 3 23 590 610 589 610 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0032	0.21	13.2	0.3	1	23	60	82	60	82	0.97
2	19	6.1e-05	0.0039	18.7	5.8	1	23	88	110	88	110	0.99
3	19	0.13	8.4	8.2	0.8	1	23	116	139	116	139	0.94
4	19	1.6	1e+02	4.7	3.4	1	23	163	185	163	185	0.95
5	19	0.62	39	6.1	0.6	5	23	195	213	194	213	0.93
6	19	0.0056	0.36	12.5	1.4	2	23	220	242	219	242	0.96
7	19	0.43	28	6.5	3.7	1	23	248	270	248	270	0.97
8	19	9.1e-05	0.0058	18.1	0.5	1	23	276	298	276	298	0.97
9	19	0.0079	0.5	12.0	0.4	1	23	304	326	304	326	0.97
10	19	1.9e-05	0.0012	20.2	0.6	1	23	333	356	333	356	0.97
11	19	0.22	14	7.5	2.1	1	23	365	388	365	388	0.93
12	19	2.5	1.6e+02	4.1	2.5	1	23	392	414	392	414	0.96
13	19	0.00017	0.011	17.2	4.4	1	23	420	442	420	442	0.98
14	19	0.029	1.8	10.2	0.5	1	23	448	470	448	470	0.97
15	19	0.0021	0.13	13.8	4.6	1	23	476	498	476	498	0.98
16	19	0.0011	0.07	14.7	1.4	1	23	504	526	504	526	0.98
17	19	0.00072	0.046	15.3	4.0	1	23	532	554	532	554	0.99
18	19	0.0042	0.27	12.9	0.5	1	23	560	582	560	582	0.97
19	19	0.00035	0.023	16.3	2.2	3	23	590	610	589	610	0.98

Sequence Information

Coding Sequence: ATGGAAGAAGTGATGCTTTCAGAAGAGTACTACGAAGTAAAACAAGAAATCGAGGAAGACTTAACATTCAACTTGGAAGACTTACATCACTCAATAGATATTAAGGAGGAAACATCGTTTGAAGTTGACGAAACATCAGAAATACTCCAACCTGTTGACACTGGTGATATTAAACCATTTGCTTGCAcaatttgcgattttaaaagTAGACTTGAAGGAAGTTTGAAAGATCATATGAAAATTCATACTGGGGAAAAACAGTTTACTTGTGAAATATGCTCTCATAAATTTAAGAACCAACGAAGTTTTAAACAGCATATGATGACTCATACCGACGAGAAACAGTTCGAATGCGCAATTTGTGCTCAGAAATGTCTAACCAAGGGAAGTTTGAAACGGCATATCGTGAAAATTCATAGCGGCGAAAGATCATATGCCTGTGAAAGTCTGAGGGATCATTTAACAGTTCATAACAGGAATCAACATTTTGCTTGTGAAATATGTGCTCATAAATGTTTAAACAAATCTGTTTTGAAACAGCATATGACTAGTCATATCGACGTAAAACCGTTTGCGCGTACACTTTGTGATTTTAAAAGTGCATATGAACATAATCTGAAAGATCACTTAAAGATTCATACCGGAGAGCGACTGCTTACTTGCGAAATATGCGGTCAAAAATGTTcgactaaattaattttgagaCGGCATATTATGAGAATTCATagcggggaaaaaccgtttgcgTGTAACATTTGTTACTTCAAAAGTGCATACAAGCAATGTTTGCAATCTCATTTGAAAAACCATACTGGGGAAAACCTCTTTGCTTGTGAGGTGTGTGCACATGAATATTCCACCAAAGGAGCACTAAAACGGCATATGATAACACACGTTGCTGGGAAACAGTTTGCgtgtaaaatttgcgacttcAAAACTGCATATGAACAAAGTTTGAAAGAGCACGTCAAAATTCACAACGGTGATCAGCCGTTTTATACTTGTGAAATATGCGCCTGGACATATTCGAGAAAAGGCAGGTTGAAACGGCATATCAGGTTAACTCATAAAACTCACATTGGAAACGAAGTGTATTCTTGTAAAATATGTTTCTGGAAATGTTCAAGCGAATTGGTTTTTGAACGGCATATGACGGCAACTCATATTAGTGAATTTGCCTGTAATACTTGTGATTTTAAAAGTGTCTGTAAGCAAAATTTGGTagatcatttaaaaaatcattctGCAGAGAAACTGTTTACTTGTGAGATATGTTTTCGCACATGTGCGTCTAAAGGAAGCTTCAAACGGCATATGacaactcataccggcgaaaaaccatttgcgTGCGAAAGTTGTGACTTTAAAAGTGCATATAAACAAAGTTTGAATGACCACTTAAAAATTCATACTGGAGAGAAGCTGTTTACTTGTGAAATGTGTTCCCGAAAATGTTTAACTAAGGAAAGTTTAAAACGGCATATGATGACTCATACCAACGAAAAGCCATTCGTTTGcgaaatttgtgattttaagaGTTCttataaacaaagtttaaaaattcatttaaaatatcataCGGGAGAGAAACTGTTTACGTGTGAAATATGCTCCCGGAAATGCACaactaaagtaattttaaaacagcatatgcgaactcataccggtgaaaaACCGTTCGCGTGCGAAGTTTGTGACTTTAAAAGTGCATATAGGCAAAGTTTGAACGACCATTTAAAAACTCATACTGAAGAGCAATTGCTACTTTGTGAAATATGTGCCCGAAAATGTTCAACCAAAGTGAGTTTGAAACGGCATATGGCAACTCATACTGCCTAA
Protein Sequence: MEEVMLSEEYYEVKQEIEEDLTFNLEDLHHSIDIKEETSFEVDETSEILQPVDTGDIKPFACTICDFKSRLEGSLKDHMKIHTGEKQFTCEICSHKFKNQRSFKQHMMTHTDEKQFECAICAQKCLTKGSLKRHIVKIHSGERSYACESLRDHLTVHNRNQHFACEICAHKCLNKSVLKQHMTSHIDVKPFARTLCDFKSAYEHNLKDHLKIHTGERLLTCEICGQKCSTKLILRRHIMRIHSGEKPFACNICYFKSAYKQCLQSHLKNHTGENLFACEVCAHEYSTKGALKRHMITHVAGKQFACKICDFKTAYEQSLKEHVKIHNGDQPFYTCEICAWTYSRKGRLKRHIRLTHKTHIGNEVYSCKICFWKCSSELVFERHMTATHISEFACNTCDFKSVCKQNLVDHLKNHSAEKLFTCEICFRTCASKGSFKRHMTTHTGEKPFACESCDFKSAYKQSLNDHLKIHTGEKLFTCEMCSRKCLTKESLKRHMMTHTNEKPFVCEICDFKSSYKQSLKIHLKYHTGEKLFTCEICSRKCTTKVILKQHMRTHTGEKPFACEVCDFKSAYRQSLNDHLKTHTEEQLLLCEICARKCSTKVSLKRHMATHTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -