Cfla022628.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- Znf131
- Assembly
- GCA_949152465.1
- Location
- OX424438.1:1302745-1304082[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.3e-05 0.00086 20.7 2.3 1 23 79 101 79 101 0.99 2 13 0.021 1.4 10.6 0.7 1 23 107 130 107 130 0.94 3 13 2.7e-05 0.0017 19.8 0.4 1 23 138 160 138 160 0.97 4 13 9.6e-06 0.00062 21.2 6.5 1 23 166 188 166 188 0.98 5 13 0.00033 0.021 16.3 2.6 1 23 194 216 194 216 0.97 6 13 0.021 1.3 10.7 0.7 1 23 222 244 222 244 0.97 7 13 0.00015 0.0098 17.4 3.4 1 23 250 272 250 272 0.98 8 13 8e-05 0.0051 18.3 0.3 1 23 278 300 278 300 0.98 9 13 0.024 1.5 10.5 3.6 1 23 306 329 306 329 0.94 10 13 0.15 9.8 8.0 7.1 1 23 335 357 335 357 0.98 11 13 0.00025 0.016 16.7 1.1 1 23 363 385 363 385 0.98 12 13 0.00088 0.056 15.0 2.0 1 23 391 413 391 413 0.99 13 13 0.016 1 11.0 4.1 1 23 419 441 419 441 0.96
Sequence Information
- Coding Sequence
- ATGGAATTTTGCGAGGAAATCATTAAGAACGAATCTATTGATTCTCTCGAAGACATTTCCAATGCTTTATTTGATTATAATGCTCCTGTAGAAGATTTAGACCAACCTTTGGATAAATATGAAGTTGTCCTAGTCAAAGAAGAAGTTGACGATTATCTGTTATATGGCGACCAGTTAGAAGAAAATTATATGGATGGGGACGTTGAACGACCACTAAAGAGGAGAAAAACCTTATACGAATGCCCCGAATGCGATTACAAATCGACAAAAAATAGTCATTTTGAAGAGCATCTCAGAACGCACACCGGTGAAAGACCTTTCAAATGTTACCTGTGTACGTTTAGTTCCAAAAAGAAAGGTGGTCTCAGTAAACACATTATAGCTGTTCACAACAATAAACGATCGATTAAGTTCATTTGCCGAAAGTGTAAACAAGTTTTCACCGATAAAGATGAATTGGTTGCCCATCAGCTGTTACACGAAGATGAACGAAAATTTGTTTGTACCTACTGTAAATGCAGTTTTAAACGATCTACACATTTAATCGAACACATTAGAACTCACactggtgaaaaaccatttgcATGTCAACATTGTGATTATAAATCGAAGAAACAGAATGGTTTAACTAGACACATGTTAATACACACCGGTGGAAAAACGTACCAGTGTGGAGAGTGTTATATTAGTTTCGAAGACAAAGTGTTGCACGAGAAGCACATGGAACTGCACAGTGTGAACTGGCCATTTCATTGTCTCGATTGTGGTTACAGAAGTAAAAAGCAATCGACTCTAAAAGATCACATGAAAATTCACACCGGTGAGAGACCGTATCCGTGTAATTTCTGCGATTACCGAGCTACTCGAAAGGGAGCCTTAGATCGCCACATGAAGGTGCATCCAAACGAAACACATTTTATGTGCAGGAGATGcgattttaaaacttcaaataaaaaagAACTTAAAGCCCACCATTTGAACGAGCACTTGGACGACTTAAAATTTTCCTGTTTAAAATGTGAATTTAAAACCGCACACAGAAATTGTTTGAACCGTCACTTGAAGACCCACAAGGATATAGACTTTTTTGAGTGTACCGAGTGTTCGTTTAAAAGCATCGATCAAAAACAATTAACTATTCACATCAGGAAACATACCGGAGAGTCGGCATACACGTGTGACCTGTGTGATTATAAAACTAACGCCAAAAGTAACTTTATGGATCACAAGAGAACGCACACCGGTGAAAAACCTTATCTTTGTACCGAGTGCGATTTCAAAACCGCACACAGATCTTGCATAAATCGACACATGATGGTTCACATGCAAAAGgattaa
- Protein Sequence
- MEFCEEIIKNESIDSLEDISNALFDYNAPVEDLDQPLDKYEVVLVKEEVDDYLLYGDQLEENYMDGDVERPLKRRKTLYECPECDYKSTKNSHFEEHLRTHTGERPFKCYLCTFSSKKKGGLSKHIIAVHNNKRSIKFICRKCKQVFTDKDELVAHQLLHEDERKFVCTYCKCSFKRSTHLIEHIRTHTGEKPFACQHCDYKSKKQNGLTRHMLIHTGGKTYQCGECYISFEDKVLHEKHMELHSVNWPFHCLDCGYRSKKQSTLKDHMKIHTGERPYPCNFCDYRATRKGALDRHMKVHPNETHFMCRRCDFKTSNKKELKAHHLNEHLDDLKFSCLKCEFKTAHRNCLNRHLKTHKDIDFFECTECSFKSIDQKQLTIHIRKHTGESAYTCDLCDYKTNAKSNFMDHKRTHTGEKPYLCTECDFKTAHRSCINRHMMVHMQKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00270294; iTF_00271672; iTF_01292482;
- 90% Identity
- iTF_00270294;
- 80% Identity
- -