Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424439.1:15144480-15146000[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0077 0.49 12.0 0.5 2 17 132 147 131 152 0.84

2 12 0.00073 0.047 15.3 2.5 1 23 159 181 159 181 0.97

3 12 4.7e-06 0.0003 22.2 1.3 1 23 187 209 187 209 0.98

4 12 1.9e-05 0.0012 20.3 1.2 1 23 215 237 215 237 0.97

5 12 0.00028 0.018 16.6 6.5 1 23 243 265 243 265 0.98

6 12 0.0049 0.31 12.7 1.2 2 23 275 296 274 296 0.96

7 12 1.4 88 5.0 2.8 1 23 303 325 303 325 0.93

8 12 0.0013 0.083 14.5 7.4 1 23 334 356 334 356 0.99

9 12 5.5e-05 0.0036 18.8 0.5 1 23 362 384 362 384 0.99

10 12 5.7e-06 0.00036 21.9 0.5 1 23 390 412 390 412 0.98

11 12 5.8e-05 0.0037 18.7 2.3 1 23 418 440 418 440 0.98

12 12 0.0014 0.089 14.4 1.4 3 23 448 469 446 469 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0077	0.49	12.0	0.5	2	17	132	147	131	152	0.84
2	12	0.00073	0.047	15.3	2.5	1	23	159	181	159	181	0.97
3	12	4.7e-06	0.0003	22.2	1.3	1	23	187	209	187	209	0.98
4	12	1.9e-05	0.0012	20.3	1.2	1	23	215	237	215	237	0.97
5	12	0.00028	0.018	16.6	6.5	1	23	243	265	243	265	0.98
6	12	0.0049	0.31	12.7	1.2	2	23	275	296	274	296	0.96
7	12	1.4	88	5.0	2.8	1	23	303	325	303	325	0.93
8	12	0.0013	0.083	14.5	7.4	1	23	334	356	334	356	0.99
9	12	5.5e-05	0.0036	18.8	0.5	1	23	362	384	362	384	0.99
10	12	5.7e-06	0.00036	21.9	0.5	1	23	390	412	390	412	0.98
11	12	5.8e-05	0.0037	18.7	2.3	1	23	418	440	418	440	0.98
12	12	0.0014	0.089	14.4	1.4	3	23	448	469	446	469	0.98

Sequence Information

Coding Sequence: ATGGCTTTATTAGAATATTCGGCAGATAACAGATTGAACGATGACATTGCTGCCgcaaattttgaacaaattgtGGTTAAGCAAGAGAAGGAGGAAGAATTTGTGAACGAAAGTGTGTCTGGCAACGTCAACGATCAACATCATGAACCtatcaaaattaaagaagaaattcAAAGACCCAACGAAGAAGAGTCggataaaaataacgaaatatACGACGAGGAGTTAGCCGAATCGATAAAGCATGAAGGTACTCATTTTTTGAGCGAAGGTAGTAGTTTTTACGAGGGTTATGATTCTGGTGTTCAAAGTTTGTTGGAAAATAGCAGTAGTGGACCTGATCAAAACATCAcattagaaaatattaagaaagAGATTCATCTAAATCCGTGGCAgtgtaaaatttgtgaaaagGTTTTCTCTTCGCCTAAAAAGTTAGATTTTCATACTAAAACACCATCACGGGACAAAACTTTTGCATGTTGTTCTTGTGCGAAAAGTTTCCGCGACATGACTCAATTAAACATTCACATACGTAAACACACGGGGGAGAAACCGTTTGAATGCGAAATCtgcttcaaaaaattttctataaagggaaatttaaataaacacacGAGGGTGCACACCGGAGATAAACCATTTGCATGTGAGATTTGTGAGCGCAAATTTACTCAGTTTGCCCACTTGGAGGATCACTTAAACACGCATTCGGTGGAACGACCGTTTATTTGTGACCACTGCGATGGCCGCTTTAAAACGAAGCATCGATTACGTAAACACATCAAAACGCATTTACGTGAagtaaagaagaaaaatatttcttgTCCCAGTTGTTTACGTACATTTTTCAAAGCTAAGCATTTAATGATTCATATGATACAGCACAATGATCAAGAATTTCCTTTTATatgtataatttgtaaaaagcAGTTTAAAGAGTACACGGTTTATCAAAATCACGTTCGACATCACAAAGAAGTGCCCGGTATTCGACCTTACAAATGTCACTTGTGCGTTAAAACTTTTGTATGTGCCAGTCATCTTACTCGTCACATAAAATCTCATTCAGGTTTACGTCCTTACACATGTGACATTTGCATGCGAGGTTTTCCTTATGCGCAGAACCTCAAACGTCATCTACAAACCCACACCGGTGAGAAACCTTTTGTGTGTGAAACGTGTACCAAGGCCTTTTCGACCATAGCTAATTTACAGAGACATAACCGTATTCATACTGGTGAAAAGCCTTTTGAGTGTACAATTTGTTCGAAGAAATTTGCACACAGCACCACTGCCAAAGACCACATGAGAATTCATACCGGTGAGAAACCTTTTGGCTGTAGTATATGCAACCAAAGGTTTGCactgaataaatttttatataagcaCATTCGTACTAAGCACCCGGAACATGCCGGTATTGTTCTCAAGAATGGCAGTCAGTATCCTATACCTTTTATCGATGTCGAACAAAAGATTGAAGAAAACGAAGAGGAAGAAGATTCTATCGatgtataa
Protein Sequence: MALLEYSADNRLNDDIAAANFEQIVVKQEKEEEFVNESVSGNVNDQHHEPIKIKEEIQRPNEEESDKNNEIYDEELAESIKHEGTHFLSEGSSFYEGYDSGVQSLLENSSSGPDQNITLENIKKEIHLNPWQCKICEKVFSSPKKLDFHTKTPSRDKTFACCSCAKSFRDMTQLNIHIRKHTGEKPFECEICFKKFSIKGNLNKHTRVHTGDKPFACEICERKFTQFAHLEDHLNTHSVERPFICDHCDGRFKTKHRLRKHIKTHLREVKKKNISCPSCLRTFFKAKHLMIHMIQHNDQEFPFICIICKKQFKEYTVYQNHVRHHKEVPGIRPYKCHLCVKTFVCASHLTRHIKSHSGLRPYTCDICMRGFPYAQNLKRHLQTHTGEKPFVCETCTKAFSTIANLQRHNRIHTGEKPFECTICSKKFAHSTTAKDHMRIHTGEKPFGCSICNQRFALNKFLYKHIRTKHPEHAGIVLKNGSQYPIPFIDVEQKIEENEEEEDSIDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00928028;
90% Identity: iTF_00270250; iTF_00271671; iTF_01292362; iTF_01294175; iTF_00928028;
80% Identity: -