Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:38475548-38485075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0085 0.54 11.9 5.6 1 23 147 169 147 169 0.98

2 11 0.045 2.9 9.6 0.1 2 23 179 200 178 200 0.89

3 11 0.0035 0.22 13.1 5.7 1 23 206 228 206 228 0.99

4 11 0.0012 0.08 14.5 1.8 1 23 235 257 235 257 0.99

5 11 0.0005 0.032 15.8 1.3 1 23 263 286 263 286 0.97

6 11 0.00024 0.015 16.8 0.5 6 23 303 320 303 320 0.99

7 11 3e-06 0.00019 22.8 0.3 1 23 326 349 326 349 0.95

8 11 1e-05 0.00066 21.1 0.3 2 23 356 378 355 378 0.94

9 11 2.9e-05 0.0019 19.6 3.0 1 23 384 407 384 407 0.94

10 11 2.7e-06 0.00017 22.9 2.7 1 23 413 435 413 435 0.98

11 11 0.0001 0.0065 18.0 0.5 1 21 441 461 441 465 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0085	0.54	11.9	5.6	1	23	147	169	147	169	0.98
2	11	0.045	2.9	9.6	0.1	2	23	179	200	178	200	0.89
3	11	0.0035	0.22	13.1	5.7	1	23	206	228	206	228	0.99
4	11	0.0012	0.08	14.5	1.8	1	23	235	257	235	257	0.99
5	11	0.0005	0.032	15.8	1.3	1	23	263	286	263	286	0.97
6	11	0.00024	0.015	16.8	0.5	6	23	303	320	303	320	0.99
7	11	3e-06	0.00019	22.8	0.3	1	23	326	349	326	349	0.95
8	11	1e-05	0.00066	21.1	0.3	2	23	356	378	355	378	0.94
9	11	2.9e-05	0.0019	19.6	3.0	1	23	384	407	384	407	0.94
10	11	2.7e-06	0.00017	22.9	2.7	1	23	413	435	413	435	0.98
11	11	0.0001	0.0065	18.0	0.5	1	21	441	461	441	465	0.92

Sequence Information

Coding Sequence: ATGGTGTTCGTTCTTTTGGTCGAAGAAACAAAATTTCAGCGGAAGTCGAGATGGAAGGAACCTAAAAAACTAACTTTGGATGAATGGGAGGCTAAACTTGCGATACATGCAAAACTGGCGAAGATTAACGAATACAGATTATTACTTCTTAAtgatttaaaattgcaatcagAACCAAATACTACTGTTGACTATGAAACATCGAATTGTAGTACTTCATATTATAATTCACAGAATTTATCCAATCCGAGCAATGACGATTTGCAAAACCAAACTGAAAGTTTCGTATTTGTTCCTGACGATGACATGAATCCtGGTATTCATTACGACGGTGTggttttaaattgcaatttatgcatgaaaaataatgcaaattatttttgtattggaTCGAAAGATATAATAAAGCACTTGTGGGAAATTCACCAAGAAAAATTGTACATCTGTAATGTTTGTAAGGAACAATTTCATCACAAGTTTGAATTGTCGAAGCACACAAAAATTCACGTACCCAGCAATTCGAATAAGAAATGGGAGTGTGGCATATGCACAAAGAAATTTGgatcaaaaaatttgttggatGAACACGAATATGCACATGCCGGTGTACAACTTTACGAGTGTGATATTTGCAACAAAAGATATACCTCAAAATATACATGTAAAATTCATAGAAAAACGCACGAACCTAGAAATCGTGATTACAAGTGTGAGATATGCGAGAGGCTTTTCCTtacaaagcaaaatttaaaacaacatgAGAAAACtcacaaaacaaaaaaagaatatttttgtaacttCTGCGATGATAGAACGTTCActacagaaaataatttaaaatcgcaTATGATTATTCACGAAGAGAACAAGAGATTCCTTTGCACGTTTACGGTTGATGGTAATCCTTGTGGGAAGAAATTTTCTCGAAAAGCGGAATTACGCGACCACAAACGTATACACACTGGAGAACGACCCTTCATCTGCACGACCTGCGGTGCGTCGTTCGCTCAACGCTCCAATCTACAGTCTCACATCAAAGCAACTCATTTAAATCTGAAAGATAAAATGTGCGACATATGTGGGAAAGGATTTAAGCGAAAGCGATTACTAATCTACCATATGAATGCGGCACACACCAAAGAACGACCCCACAAATGCGATGAATGTGGAAAAGATTTTGTTTATCCCGAGCACCTTAAGAAACATAAACTTAATCTCCATAAAAACGAAAAACCTTTCCAGTGcaatatttgtaacaaaaattttagtagTCGTGATAATTATAATTCTCATTTGTACACGCACGCAACTCGAAAGCAATACGAGTGCTATACATGTGGAGTTGGATTTACGCGCAAACCGACATTGAAAAAACATATGGATCTAGAGAAACACTTGGGGACtacgtttattttaaatcgtGCCGAAATGCAAATTTCCAGTGAAactTCTTGGGAAGTAATCACCGTTTCTGAAATTAGAGAAATAGAGAACATAACCGATGGCAATGCCCAAACTATACCGATTAATGGAATTGTGTATGAAAATTATGAATATGCAAATCAGTATTATTCAAATGGTGAAAATTCAAATGAAGCCTACACTATTGTACAAACTCCAGATGGAAGTCATTATATTGAGATAGAAAATGACcagattccGGAAGATGATTATGCAAACTACATCGAACCATCATCGATAGATCCTAACGAGTACggtaataatgaaataatcaacCCTACGAACATGTATCAAAATGTAACCGATCAAAATACTTTACAACAAATAGAAATTCGGAGAGacaataaagtaaaatatgtCCTCATGGAATTTGTTCccgattaa
Protein Sequence: MVFVLLVEETKFQRKSRWKEPKKLTLDEWEAKLAIHAKLAKINEYRLLLLNDLKLQSEPNTTVDYETSNCSTSYYNSQNLSNPSNDDLQNQTESFVFVPDDDMNPGIHYDGVVLNCNLCMKNNANYFCIGSKDIIKHLWEIHQEKLYICNVCKEQFHHKFELSKHTKIHVPSNSNKKWECGICTKKFGSKNLLDEHEYAHAGVQLYECDICNKRYTSKYTCKIHRKTHEPRNRDYKCEICERLFLTKQNLKQHEKTHKTKKEYFCNFCDDRTFTTENNLKSHMIIHEENKRFLCTFTVDGNPCGKKFSRKAELRDHKRIHTGERPFICTTCGASFAQRSNLQSHIKATHLNLKDKMCDICGKGFKRKRLLIYHMNAAHTKERPHKCDECGKDFVYPEHLKKHKLNLHKNEKPFQCNICNKNFSSRDNYNSHLYTHATRKQYECYTCGVGFTRKPTLKKHMDLEKHLGTTFILNRAEMQISSETSWEVITVSEIREIENITDGNAQTIPINGIVYENYEYANQYYSNGENSNEAYTIVQTPDGSHYIEIENDQIPEDDYANYIEPSSIDPNEYGNNEIINPTNMYQNVTDQNTLQQIEIRRDNKVKYVLMEFVPD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -