Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:33105018-33107014[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.9e-05 0.0012 20.3 1.0 2 23 165 186 164 186 0.97

2 12 1.2e-05 0.00076 20.9 1.9 1 23 192 214 192 214 0.98

3 12 0.00027 0.017 16.6 1.0 1 23 220 242 220 242 0.97

4 12 0.00071 0.045 15.3 1.8 1 23 248 270 248 270 0.98

5 12 2.2e-05 0.0014 20.1 2.5 2 23 277 298 276 298 0.97

6 12 0.0039 0.25 13.0 1.8 1 23 304 326 304 326 0.98

7 12 0.00016 0.01 17.3 2.7 1 23 332 354 332 354 0.96

8 12 0.0044 0.28 12.8 1.9 1 23 360 382 360 382 0.97

9 12 0.004 0.26 12.9 0.7 1 23 388 410 388 410 0.97

10 12 7e-07 4.5e-05 24.8 0.2 1 23 416 438 416 438 0.97

11 12 0.039 2.5 9.8 2.2 1 23 444 466 444 466 0.96

12 12 0.00056 0.036 15.6 4.6 1 23 472 495 472 495 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.9e-05	0.0012	20.3	1.0	2	23	165	186	164	186	0.97
2	12	1.2e-05	0.00076	20.9	1.9	1	23	192	214	192	214	0.98
3	12	0.00027	0.017	16.6	1.0	1	23	220	242	220	242	0.97
4	12	0.00071	0.045	15.3	1.8	1	23	248	270	248	270	0.98
5	12	2.2e-05	0.0014	20.1	2.5	2	23	277	298	276	298	0.97
6	12	0.0039	0.25	13.0	1.8	1	23	304	326	304	326	0.98
7	12	0.00016	0.01	17.3	2.7	1	23	332	354	332	354	0.96
8	12	0.0044	0.28	12.8	1.9	1	23	360	382	360	382	0.97
9	12	0.004	0.26	12.9	0.7	1	23	388	410	388	410	0.97
10	12	7e-07	4.5e-05	24.8	0.2	1	23	416	438	416	438	0.97
11	12	0.039	2.5	9.8	2.2	1	23	444	466	444	466	0.96
12	12	0.00056	0.036	15.6	4.6	1	23	472	495	472	495	0.97

Sequence Information

Coding Sequence: ATGACTGCAAACGCGATGTCGgaagaaattaaattagattttccAAACGAAGTCAAGGACGAACCTGTTGAGGAAATAAATTGCGACCAAAGCATTTTTGTTAAACCGGAACCAACGGATTGTACcaatgcaaatttaaaagttgaaagCGAAGATTTACATCACTCgattgatattaaagaagaaatCTTGGAACCGCAAGTAGTCGATGGCAACGAAACTGACAGGTGCGAAGAGGAATCTTCGGAAACTACCAGCACCAGCCACAGCGAATCCAACAGTTCAGTTATGGATGAAGTGGTGGTTAAAGAAGAATTTCCAGCGACCGCTGGTTTGAAAGCTCCATGCCGTTTTGAAAACAAAGCGGAAGTAGAAAGTATTGAAATTAAAGTAGAAGAACTTCATCACTCGATAGAGGTTAAAGAAGAAAGTGGAACTTGTAAAACTCAGAATGGTGAAAATTCAGGTGATTTATGTAATACTAAACAATTGACGTGCGACTTATGCGGCTTGAAATTTACTTACAAGTCAAAATACGAAATTCATTTGAGAACTCATAGTCGCGAAAAACCGTTTGTGTGTGAATTATGCAACTGCAAATTTTCCGAACGAGGAAATTTGCGAAGGCACATGTTAATTCATACGGGTGAGAAAAAGTTTGCATGCGaagtttgtgattataaatgtgcagATAGAGGAAGACTGAAAATTCATTTGAGAACGCACACCGGTGAGAAACCTTTTTCGTGCGAAGTTTGCGACTACAAATGTGCTGAAAAACCTAAACTGCGAAGGCACTTGttaactcatactggcgagaaaaaTTTATCTTGTgatatttgtgattataaatgttcgcaACAAACAAGTTTGAAATTGCATATACGAACACACACGGGTGAAGAATTATTTAATTGCGAAACATGTAGTTACAAGACTTCACGGATTGTGAACATGCAGAAACATTTACAAACCCACACCGGTGAAAAATCATATTTGTGTGAATTTTGCGACTACAGGTGCATTCAAAAGGGAAGCCTACAAAACCATTTACGaactcacaccggcgaaaaaccattcgCTTGCGAAGTGTGCGATTACAAATGCTCGGAAAAGGGAAGGCTAAAAATCCATTCGAGAACGCATACGGGTGTAAAACCGTACGCGTGTGatttttgcgattataaaagtgCGGAGAGAGGACACTTACGAAATCATCTATTGATTCATAGTGGTCGTAAACCATTTGCGTGTGAAATTTGTGGGGCAAAATTTTCACAGAAAGGAAATTTAACTACACATCTAAGACtgcataccggcgagaaactgTTTTCCTGTGAGatgtgcgattataaatgtttgcGAGAATCTACTTTACTGAGACATTTAATAAATCATGCTAGCCAAGACTTATTTACTTGTGGGACTTGCTATTGTAAGTTTTCACGAAAGGTTAATTTAAAAGaccatttgaaaaaaattcatttattgtAA
Protein Sequence: MTANAMSEEIKLDFPNEVKDEPVEEINCDQSIFVKPEPTDCTNANLKVESEDLHHSIDIKEEILEPQVVDGNETDRCEEESSETTSTSHSESNSSVMDEVVVKEEFPATAGLKAPCRFENKAEVESIEIKVEELHHSIEVKEESGTCKTQNGENSGDLCNTKQLTCDLCGLKFTYKSKYEIHLRTHSREKPFVCELCNCKFSERGNLRRHMLIHTGEKKFACEVCDYKCADRGRLKIHLRTHTGEKPFSCEVCDYKCAEKPKLRRHLLTHTGEKNLSCDICDYKCSQQTSLKLHIRTHTGEELFNCETCSYKTSRIVNMQKHLQTHTGEKSYLCEFCDYRCIQKGSLQNHLRTHTGEKPFACEVCDYKCSEKGRLKIHSRTHTGVKPYACDFCDYKSAERGHLRNHLLIHSGRKPFACEICGAKFSQKGNLTTHLRLHTGEKLFSCEMCDYKCLRESTLLRHLINHASQDLFTCGTCYCKFSRKVNLKDHLKKIHLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00268901;
90% Identity: iTF_00268901;
80% Identity: iTF_00268901;