Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:4606773-4613135[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00023 0.015 16.8 3.4 1 23 163 185 163 185 0.99

2 13 0.16 11 7.9 4.8 1 23 191 213 191 213 0.99

3 13 7.4 4.7e+02 2.7 0.7 1 9 219 227 219 231 0.88

4 13 2.4e-05 0.0015 19.9 5.6 1 23 325 347 325 347 0.99

5 13 0.00051 0.032 15.8 2.3 1 23 353 375 353 375 0.99

6 13 0.00094 0.06 14.9 0.2 1 23 381 403 381 403 0.97

7 13 0.073 4.7 9.0 5.0 1 23 409 431 409 432 0.96

8 13 0.0048 0.31 12.7 2.8 1 23 438 460 438 460 0.97

9 13 5.1e-05 0.0033 18.9 0.1 1 23 466 488 466 488 0.98

10 13 1.2e-05 0.00078 20.9 0.6 1 23 494 516 494 516 0.97

11 13 2.5e-06 0.00016 23.0 1.4 1 23 522 544 522 544 0.99

12 13 4e-05 0.0026 19.2 0.8 1 23 550 572 550 572 0.98

13 13 4.4e-07 2.8e-05 25.4 0.9 1 23 578 600 578 600 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00023	0.015	16.8	3.4	1	23	163	185	163	185	0.99
2	13	0.16	11	7.9	4.8	1	23	191	213	191	213	0.99
3	13	7.4	4.7e+02	2.7	0.7	1	9	219	227	219	231	0.88
4	13	2.4e-05	0.0015	19.9	5.6	1	23	325	347	325	347	0.99
5	13	0.00051	0.032	15.8	2.3	1	23	353	375	353	375	0.99
6	13	0.00094	0.06	14.9	0.2	1	23	381	403	381	403	0.97
7	13	0.073	4.7	9.0	5.0	1	23	409	431	409	432	0.96
8	13	0.0048	0.31	12.7	2.8	1	23	438	460	438	460	0.97
9	13	5.1e-05	0.0033	18.9	0.1	1	23	466	488	466	488	0.98
10	13	1.2e-05	0.00078	20.9	0.6	1	23	494	516	494	516	0.97
11	13	2.5e-06	0.00016	23.0	1.4	1	23	522	544	522	544	0.99
12	13	4e-05	0.0026	19.2	0.8	1	23	550	572	550	572	0.98
13	13	4.4e-07	2.8e-05	25.4	0.9	1	23	578	600	578	600	0.97

Sequence Information

Coding Sequence: ATGGAGAAGACTTTGGTCTTTGAAGGGTACTATGAAGTAAAAGAAGAAGCTGAGGATAGCCCCATACCTGAACTGGAAACCAGCGGTGGGTCAACAGATCTCTACGAAGTAAAAGAAGAACCGCGGGAAGACATAGAATTCAAAGTGGAGGACTTGCATCATTCGATTATTATTAAGGAAGACAAACCATCTGAGTCAAACACAGAACTGGAACCACTAGAAGATTTAAAAGTTTACTTCGgaACTAAAACTCAAGCTATTCGGCTTGAAAAGCAGTTCGGAGAGTTTGAGTACAAGACGATGCTATTGTTACAGGATATTCTGAGCAATTCAATTAACTACTCTCAGATTAAGACGGAAGAGGAAGATGAAGTAGACGTGAAGCTGGAGGATTTGCATCATTCtattgacattaaagaagagGTCACGATACTTATAAAATCTGAACCCGAGAAACAACGGAGAGCTGAATCGAGGGGGAAACGGTTTACGTGTGAACTTTGCGATTACAAATGTGCATACAAAGGAGCATTAGAACATCATTTAAGGACCCACACCGGTGAAAAACCGTTCAAGTGTGAattttgcgaatataaatgcgGACAAAAGAGAAATTTAGTATTTCActtaagaactcatactggcgaaaagcTGTTTAGGTGTGAATATTGCGACTACAAGAGTGAACCCCAACCTTCCGTATCGTCTAATACCAGAACCCTACGTTGTGCACAATCTAACTTATCCGACATTACAAATCCAATTTGTACCACCACTGGCTACGCTGAATTTCTAATGTTATATTTATTGCAGGAATCTCCATGCTATTCGAATAGCTTCTTTCAAATTAAGACGGAAGATGACGAACAAATAGAAGTCAAGTTGGAAGATCTGCATCATTCGGTGGATATTAAAGAAGAAACGGCTGTTGCCGAGTCTCAAGACTGGACATCGGAAACAAGGGGAAAGCAGTTTACGTGTGAATTTTGCGATTATAGATGTGCACGTAAATCACACTTGGAGAGTCACATTAGAACCCACACTGGTGAGAAGCCTTATACTTGtgaaatttgcgattataaaagtgCTTACAAAGGCCACATAAAAACTCACTtgagaactcataccggcgagaagccGTTTGCATGTGAATTTTGTGACTATCGAGGAGTTTATAAGGCAGACTTGACAATTCActtaagaactcataccggtgaaaaACCGTTCACCTGTGAATTCTGCGACTATAAATGCGCACGTAAAGAACGCGTAAAAATGCATGTCAGAATTCACCACACCGGCGAGAAGCTGTTCGCATGCGAAATGTGCGATTATAAAAGCGGCCACAAAGGACACTTTACAATCCACTTGAGAATCcacactggcgagaaaccatttacgTGCGAAATTTGCGGCAGTAAATTTGCGGCCAGTGGTGGTTTGAAAAGGCATCTAAGAATCCacacgggggaaaaaccgtttgcctgcgaaatttgtgattttaaattttcagagaAGAGCAGTTTAAATAAGCATTTGATCAGTCACGCAGGACAGAAACCGTTTACGTGTGAAGTTTGCGATTACAAAAGtgcaaataaatcaaatttaaaaactcatttaAGGACTCATACAGGTCAGAAACCGTTTACATGtgaaatttgcgattataaaagtgcccgcaaggaaaatttaaaaattcacttcaGAATTCATACGGGTGAGAAGCCGTTCGCTTGCGAAATTTGCGAATACAAATTTTCAGACAAAAGCAGTTTAAATAAACATGTAAGGACTCATACCAGCGAGAAACTGTctacatga
Protein Sequence: MEKTLVFEGYYEVKEEAEDSPIPELETSGGSTDLYEVKEEPREDIEFKVEDLHHSIIIKEDKPSESNTELEPLEDLKVYFGTKTQAIRLEKQFGEFEYKTMLLLQDILSNSINYSQIKTEEEDEVDVKLEDLHHSIDIKEEVTILIKSEPEKQRRAESRGKRFTCELCDYKCAYKGALEHHLRTHTGEKPFKCEFCEYKCGQKRNLVFHLRTHTGEKLFRCEYCDYKSEPQPSVSSNTRTLRCAQSNLSDITNPICTTTGYAEFLMLYLLQESPCYSNSFFQIKTEDDEQIEVKLEDLHHSVDIKEETAVAESQDWTSETRGKQFTCEFCDYRCARKSHLESHIRTHTGEKPYTCEICDYKSAYKGHIKTHLRTHTGEKPFACEFCDYRGVYKADLTIHLRTHTGEKPFTCEFCDYKCARKERVKMHVRIHHTGEKLFACEMCDYKSGHKGHFTIHLRIHTGEKPFTCEICGSKFAASGGLKRHLRIHTGEKPFACEICDFKFSEKSSLNKHLISHAGQKPFTCEVCDYKSANKSNLKTHLRTHTGQKPFTCEICDYKSARKENLKIHFRIHTGEKPFACEICEYKFSDKSSLNKHVRTHTSEKLST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -