Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:29941655-29943136[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0014 0.09 14.4 0.4 2 23 78 99 77 99 0.96

2 15 2e-05 0.0013 20.2 1.7 1 23 105 127 105 127 0.98

3 15 0.00034 0.022 16.3 1.3 1 23 133 155 133 155 0.97

4 15 0.00058 0.037 15.6 1.3 1 23 161 183 161 183 0.97

5 15 0.035 2.2 10.0 4.2 1 23 189 211 189 211 0.97

6 15 0.00026 0.017 16.7 1.4 1 23 217 239 217 239 0.98

7 15 0.0012 0.076 14.6 1.4 1 23 245 267 245 267 0.97

8 15 0.24 16 7.3 6.5 1 23 272 294 272 294 0.98

9 15 0.00098 0.063 14.9 0.4 1 23 300 322 300 322 0.97

10 15 0.00014 0.0087 17.6 3.0 1 23 328 350 328 350 0.99

11 15 0.0004 0.025 16.1 3.8 1 23 356 378 356 378 0.97

12 15 0.00027 0.017 16.6 0.9 1 23 384 406 384 406 0.97

13 15 0.00016 0.01 17.4 2.4 1 23 412 434 412 434 0.98

14 15 0.019 1.2 10.8 3.1 1 23 440 462 440 462 0.97

15 15 3.5e-05 0.0023 19.4 0.4 1 23 468 490 468 490 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0014	0.09	14.4	0.4	2	23	78	99	77	99	0.96
2	15	2e-05	0.0013	20.2	1.7	1	23	105	127	105	127	0.98
3	15	0.00034	0.022	16.3	1.3	1	23	133	155	133	155	0.97
4	15	0.00058	0.037	15.6	1.3	1	23	161	183	161	183	0.97
5	15	0.035	2.2	10.0	4.2	1	23	189	211	189	211	0.97
6	15	0.00026	0.017	16.7	1.4	1	23	217	239	217	239	0.98
7	15	0.0012	0.076	14.6	1.4	1	23	245	267	245	267	0.97
8	15	0.24	16	7.3	6.5	1	23	272	294	272	294	0.98
9	15	0.00098	0.063	14.9	0.4	1	23	300	322	300	322	0.97
10	15	0.00014	0.0087	17.6	3.0	1	23	328	350	328	350	0.99
11	15	0.0004	0.025	16.1	3.8	1	23	356	378	356	378	0.97
12	15	0.00027	0.017	16.6	0.9	1	23	384	406	384	406	0.97
13	15	0.00016	0.01	17.4	2.4	1	23	412	434	412	434	0.98
14	15	0.019	1.2	10.8	3.1	1	23	440	462	440	462	0.97
15	15	3.5e-05	0.0023	19.4	0.4	1	23	468	490	468	490	0.98

Sequence Information

Coding Sequence: ATGAATAATGCGGTATCTTTAGGAGGGTTGAAGAGTTCGGAACAATCTATTGAAAGTATTCCAACCTTTTGTAATGTGAATATAAAATGTGAAATCAAAACTGAAGACGAAAAGGTGGAAATTAAATCGGAAGAGGAAGATGTAGATATCAAAttggaagatttgcatcattcgATAGATATCAAGGAAGAAATTTTACCTTTGGAATCTCAACCGGCTGGAGAAAAATTGATATGCAACATTTGTAATGGAAAATTTGCtaataaattaacattgaaGAAACATGCACTAACCCATTCTGGTGAAAAACCGTTTCAATGCGAAATTTGTGATTACAAAACTTCCTATAAATATAATCTGATGCTTCATTTGAGAAATCATACCGGTGACAAACCTTTTGCTtgtgtaatttgtaattttaagtcTTCATTTAAGAGTAGTTTAAAGATTCATTTGAGAACTCACACCGGAGAGAAACCGTTTGAATGTGAAATATGTGACTTTAAATGTGCTAGAAAGACTGGACTACAACTTCATTTAAAAGGACATGCCGGTGAGAAACCTTTTATATGTGAGgtttgtgattttaaatgtgCACATCAAAGAACATTTAAAGAGCACTTAAAAGcacataccggggaaaaaccgtttacGTGTGAAATTTGCAACTGGAAATGTGCAACCAATGATAAATTGAAATTGCATTTAACAATTCATACCGGAGAAAAACCTTTTGCGTGCAAATTTTGCGACTTGAAATTTGCGCTAAAAAGATATTTGTctattcatttaaaaactcatatCGATAAACCTTTTTCGTGCgaattttgtgattataaatgtgcgCACAAGAGAAGAATACGAGATCACATACGAAaacatactggcgagaaaccttTTGCGTGCGacatttgcgattttaaatctGCACAAAAGGCAAAATTACAGCTACATTTAAGAAATCATACTGGAGAGCAGCGTTTCACATGCGAATTTTGTGAACTTAAATTTTCgcagaaagaaaaatttaccCTTCATTTGAGAACTCATTcaggcgagaaaccatttatgTGCGAAATTTGTGGTTGCAACTGTACAACTAAAGATCAATTGAAATTGCATTTGACGATTCATACTGGCGAAGTACCCTTCGCCTGTAAATTTTGCGACGAGAAGTTTGCACTAAAAACATATTTGAATGTTCATGTAAAAACCCATGCCGGGGATAAACCATTTGTATGTAAAATTTGTGAGTATAAATGTACAGAGAAGAGAACCTTAGAAGAACACATGAGAATTCATACTGGAGAGAAACCGTTCGCGTGtggattttgtaattttaaaactgcGCATAGAAGAAGTTTAAAAGTTCATGTAAGGAAACATACGGGCGATAAACCGTACGCTTGcgaaatttgtgattataaaggTACACAAAGATCTCTATTGGTTCGGCATTTAAAAACTCATAGTgtagtttga
Protein Sequence: MNNAVSLGGLKSSEQSIESIPTFCNVNIKCEIKTEDEKVEIKSEEEDVDIKLEDLHHSIDIKEEILPLESQPAGEKLICNICNGKFANKLTLKKHALTHSGEKPFQCEICDYKTSYKYNLMLHLRNHTGDKPFACVICNFKSSFKSSLKIHLRTHTGEKPFECEICDFKCARKTGLQLHLKGHAGEKPFICEVCDFKCAHQRTFKEHLKAHTGEKPFTCEICNWKCATNDKLKLHLTIHTGEKPFACKFCDLKFALKRYLSIHLKTHIDKPFSCEFCDYKCAHKRRIRDHIRKHTGEKPFACDICDFKSAQKAKLQLHLRNHTGEQRFTCEFCELKFSQKEKFTLHLRTHSGEKPFMCEICGCNCTTKDQLKLHLTIHTGEVPFACKFCDEKFALKTYLNVHVKTHAGDKPFVCKICEYKCTEKRTLEEHMRIHTGEKPFACGFCNFKTAHRRSLKVHVRKHTGDKPYACEICDYKGTQRSLLVRHLKTHSVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271596;
90% Identity: iTF_00271596;
80% Identity: -