Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:8455888-8457291[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.2e-05 0.0014 20.1 1.1 1 23 79 101 79 101 0.98

2 14 1.9e-05 0.0012 20.2 2.7 1 23 107 129 107 129 0.98

3 14 1.7 1.1e+02 4.7 9.0 1 23 135 157 135 157 0.97

4 14 0.001 0.065 14.8 4.8 1 23 163 185 163 185 0.98

5 14 0.00048 0.031 15.8 5.5 1 23 191 213 191 213 0.99

6 14 0.00054 0.034 15.7 3.7 1 23 219 241 219 241 0.98

7 14 0.00019 0.012 17.1 5.3 1 23 247 269 247 269 0.99

8 14 3.4e-06 0.00021 22.6 2.1 1 23 275 297 275 297 0.98

9 14 5e-07 3.2e-05 25.2 1.3 1 23 303 325 303 325 0.99

10 14 0.012 0.75 11.5 0.9 1 23 331 354 331 354 0.92

11 14 9.5e-05 0.0061 18.0 2.7 1 23 360 382 360 382 0.97

12 14 0.00061 0.039 15.5 1.9 1 23 388 410 388 410 0.96

13 14 0.012 0.75 11.5 5.3 3 23 418 438 416 438 0.98

14 14 9.6e-05 0.0061 18.0 3.5 1 23 444 466 444 466 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.2e-05	0.0014	20.1	1.1	1	23	79	101	79	101	0.98
2	14	1.9e-05	0.0012	20.2	2.7	1	23	107	129	107	129	0.98
3	14	1.7	1.1e+02	4.7	9.0	1	23	135	157	135	157	0.97
4	14	0.001	0.065	14.8	4.8	1	23	163	185	163	185	0.98
5	14	0.00048	0.031	15.8	5.5	1	23	191	213	191	213	0.99
6	14	0.00054	0.034	15.7	3.7	1	23	219	241	219	241	0.98
7	14	0.00019	0.012	17.1	5.3	1	23	247	269	247	269	0.99
8	14	3.4e-06	0.00021	22.6	2.1	1	23	275	297	275	297	0.98
9	14	5e-07	3.2e-05	25.2	1.3	1	23	303	325	303	325	0.99
10	14	0.012	0.75	11.5	0.9	1	23	331	354	331	354	0.92
11	14	9.5e-05	0.0061	18.0	2.7	1	23	360	382	360	382	0.97
12	14	0.00061	0.039	15.5	1.9	1	23	388	410	388	410	0.96
13	14	0.012	0.75	11.5	5.3	3	23	418	438	416	438	0.98
14	14	9.6e-05	0.0061	18.0	3.5	1	23	444	466	444	466	0.98

Sequence Information

Coding Sequence: ATGTTGCTCAAATCTTGTACGAAGGCTGAAACTGCTATTACTAATATTGATATGAATATGGAAATGGTATTTGTTGATGAATTGGATAATGCTGGCACcgaaattaaaactgaaaaaatggAAGAAATTGTTGTCAAGCTGGAAGACTTACATCATTCGatcgacattaaagaagaaaccTTGAGTACCAATTTTCAACTGAAAGAAGGTTTGAAACCGCAAATATGCAAACAATTCGTATGTGGGGTATGTAACGTAATATTTACCAATAAATTTCACCTAAGTGAGCATATGAAAGTTCATACGGGGCAGAAACCGTTCGAGTGCCAATTATGCGATTATAAATCATCTCgtaaggaaaatttaaaaaggcaTTCACGAACTCATACTCACCAAAAACAGCATGAATGTGAAATCTGTAACCTGAAATGTAAGCATAATAAAGCTTTAAATTGTCATTACCGAATCCATGCTGTCCCGAAGCTGTTTGAGTGTAAATTTTGCGTTTACAAATCTTCTCGAAAAGAACATCTGAAACTTCACTTACGAACCCATTCCGATGAAAAACCGTTCCGGTGTACAATATGCGATTTCAGATGTTCTTATAAACAATCTCTGAAAAGTCATCAACTAACTCATACTGGTGAGAAACCCTTCGAGTGCTACATTTGTAGTTACAAATGTACTCAAAAAGGAACCTTGAAAGGTCATTTACGAACTCACACCCAGGAGAAATCCTACGAGTGTAAAATGTGTGCATATAAATGTTCTCGAAAGGATCAACTGAAAAGGCATTCccgaactcataccggggaaaaaccgtatgaATGTACCATTTGTGAATTGACATTTTCCCAAAAGGGACATTTGAATAATCATTTTCgaattcatactggcgagaaaccatttaagtgtACTATTTGTGATTTAGGCTTTTCCCAGAAAAACACTTTGAAACGTCATATTCTGACTCATACTGGGGAGAAACCCTTTGAATGCATTGTATGTGGTTATAAGTGTTCTCAAAAGGGAACCCTGACAGCTCATTCGTTGCGAGTTCACACCGACAAGAAATCCTAcgattgcaaaatttgtgattataaatgttctcggAAAGACCAATTGGTAAGCCATTCACGAATTCACACCGGAAAAAAACTGTTtgaatgtaacatttgcgattataaatcctTTCAGGGAGGACATTTGAAAGATCACTTAAGAactcacaccggggaaaaaccgtttggaTGTACAATTTGCGACTTCAAAAGTTCGCATAAACATACTTTGAAAggtcatttacgaactcataccggcgagaaaccctTCAGGTGTACAATTTGCGATTTCAGATGTTCACAAAATAGACAGCTGAAGATTCATTTGCGAGCTCATACCTAG
Protein Sequence: MLLKSCTKAETAITNIDMNMEMVFVDELDNAGTEIKTEKMEEIVVKLEDLHHSIDIKEETLSTNFQLKEGLKPQICKQFVCGVCNVIFTNKFHLSEHMKVHTGQKPFECQLCDYKSSRKENLKRHSRTHTHQKQHECEICNLKCKHNKALNCHYRIHAVPKLFECKFCVYKSSRKEHLKLHLRTHSDEKPFRCTICDFRCSYKQSLKSHQLTHTGEKPFECYICSYKCTQKGTLKGHLRTHTQEKSYECKMCAYKCSRKDQLKRHSRTHTGEKPYECTICELTFSQKGHLNNHFRIHTGEKPFKCTICDLGFSQKNTLKRHILTHTGEKPFECIVCGYKCSQKGTLTAHSLRVHTDKKSYDCKICDYKCSRKDQLVSHSRIHTGKKLFECNICDYKSFQGGHLKDHLRTHTGEKPFGCTICDFKSSHKHTLKGHLRTHTGEKPFRCTICDFRCSQNRQLKIHLRAHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -