Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:4616634-4618541[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00048 0.031 15.8 4.6 1 23 64 86 64 86 0.98

2 18 0.0091 0.58 11.8 1.7 1 23 92 115 92 115 0.96

3 18 0.0025 0.16 13.6 0.3 1 23 121 143 121 143 0.97

4 18 0.0079 0.5 12.0 4.9 2 23 150 171 149 171 0.97

5 18 0.0041 0.26 12.9 1.8 1 23 177 199 177 199 0.97

6 18 0.08 5.1 8.8 6.9 1 23 205 228 205 228 0.98

7 18 1.2e-05 0.00074 20.9 0.8 1 23 234 256 234 256 0.97

8 18 0.0023 0.15 13.7 1.5 1 23 295 317 295 317 0.97

9 18 0.0017 0.11 14.1 0.6 1 23 348 370 348 370 0.97

10 18 0.0026 0.17 13.5 0.9 1 23 376 398 376 398 0.97

11 18 0.00022 0.014 16.9 0.1 1 23 404 426 404 426 0.97

12 18 0.0052 0.33 12.6 0.4 1 23 432 454 432 454 0.98

13 18 0.0018 0.12 14.0 2.9 1 23 460 482 460 482 0.99

14 18 0.0034 0.22 13.2 2.1 1 23 488 510 488 510 0.99

15 18 0.0016 0.1 14.2 1.8 1 23 516 538 516 538 0.97

16 18 0.0017 0.11 14.1 1.5 2 23 545 566 544 566 0.97

17 18 0.0017 0.11 14.1 0.1 1 22 572 593 572 593 0.96

18 18 0.15 9.3 8.0 7.3 2 23 601 622 600 623 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00048	0.031	15.8	4.6	1	23	64	86	64	86	0.98
2	18	0.0091	0.58	11.8	1.7	1	23	92	115	92	115	0.96
3	18	0.0025	0.16	13.6	0.3	1	23	121	143	121	143	0.97
4	18	0.0079	0.5	12.0	4.9	2	23	150	171	149	171	0.97
5	18	0.0041	0.26	12.9	1.8	1	23	177	199	177	199	0.97
6	18	0.08	5.1	8.8	6.9	1	23	205	228	205	228	0.98
7	18	1.2e-05	0.00074	20.9	0.8	1	23	234	256	234	256	0.97
8	18	0.0023	0.15	13.7	1.5	1	23	295	317	295	317	0.97
9	18	0.0017	0.11	14.1	0.6	1	23	348	370	348	370	0.97
10	18	0.0026	0.17	13.5	0.9	1	23	376	398	376	398	0.97
11	18	0.00022	0.014	16.9	0.1	1	23	404	426	404	426	0.97
12	18	0.0052	0.33	12.6	0.4	1	23	432	454	432	454	0.98
13	18	0.0018	0.12	14.0	2.9	1	23	460	482	460	482	0.99
14	18	0.0034	0.22	13.2	2.1	1	23	488	510	488	510	0.99
15	18	0.0016	0.1	14.2	1.8	1	23	516	538	516	538	0.97
16	18	0.0017	0.11	14.1	1.5	2	23	545	566	544	566	0.97
17	18	0.0017	0.11	14.1	0.1	1	22	572	593	572	593	0.96
18	18	0.15	9.3	8.0	7.3	2	23	601	622	600	623	0.94

Sequence Information

Coding Sequence: ATGATAGGTTTATTCCAGGAATCCCCAAGCTATTCAAGTAGTTACTCACAAATTAAgacagaagaagaagaattggaCATCAAATTAGAGGAATtacatcattccattgacattaaagaagaaacgTCACCGATAAGTATAGAATCCCAAGTGGTCGAACAAAGGACAACGGAAACATCTGCTAAACGGTTTACGTGTGAATTGTGCGATTATAAATGCACaaagaaaaatcttttaaaatctCATCAGCGAATTCATATTGGTCCGAAACAGTTTGTATGTgaattttgcgattttaaaactacacataaaattcaattaaattcccATGTTATACGAATTCACACTGGCGAGAAACAATTTGCTTGCGAATTTTGTGATTATCGCGGAGTATACAAATCGGATTTAAGAGTCCATTTATTAAGCCACATCGGCGAGAAACCGCTCGAAtgtaaattttgcgattttaaaactGCTCACAAAGGGCACTTCAAtattcatttaagaactcataccggtgagaaACCGTTTGCTTGTGAATTTTGTGATTATCGTTCCAGGTATAAGCGATACCTAACAATTCACTTAAGTACTCATACTGGCCAGAAACCGTTTAAATGTGATTTTTGTGACTATAAAGGTGCACATAAATCATGTTTGTACagtcatttaagaaaaaaacattCTGACGTGAAACCGTTTGCTTGCGAAATTTGTGATTATACAACCGCACACaagggaaatttaaattccCACGTTCGGACTCATACCGATCCCAAACCTTCTGACCAGGAAACGTTAAAACCTGCTCTTTCTGAAGATAACAATGCATATGAAGAATTTTTGAAGGCATATTCCAAAGATTACATTCCCGAGAAGCCATTTGCATgtgaattttgtgaatttaaaagcgaaaacaagaaaaatttgaattcccACGTTCGAACCCATACCAATCCCAAACCTGACCtttctgataataaaaattcatatgAAGAATTTTTGAAAGCTTATTCGAAAGATTACATTCCCGAGAAACCGTTTGCATGTGAATTTTGCGACTTTAAAGCTTCACAACAAAAGCAATTAAATTCCCATGTCCGAATTCATAATGGTGGGAAACCGTTTGCTTGTAACTTGTGTGATTTTCGGGGAATACATCGAGGAGATTTAAGAGTTCATTTAAGACggcataccggcgagaaaccgtttgcaTGTGAATTTTGTGATTACAAAACTGTGCAGAAAGGAGCCCTAAACGTTCATATTCGaattcatactggcgaaaagccattttcGTGTGAATTGTGTGATTATCAAGCTGGAACTAAAAGAGATTTGAGAATACATCAAAGtactcataccggggaaaaaccgtattcGTGTGAATTTTGTTCTTTTAGATCTGCACGCAAAGGACATTTGAATGTTCACTTAAAAACTCATATGGAGGAGAAACCGTTCAAATGTAAATTCTGTGAATTTAGAAGCGAATATAATGCATCCTTAAAAGCCCATTTGAAAACTCACACCGACGTGAAGCCGTTTGCATGTGAATTCTGCGATTATCGATGTGCACTTAAAGGAGATTTAAAAACGCATTTAAGGAGTCATCCCGACGCGAAACCGCTGGTTTGTgaattttgtgattataaaaCTGCACAGAAGGGACATTTCAACATTCATCGACGAATTCATACCGGTCAGAAACCCTACGCATGCAATAGTTGTGATTATCGAACCTCATACAAAGGAGACCTAATAGCTCATTTAAGAACTCCTTCGGACGAAAAACCGGTTACTTGTGAATTGTGTGACTATAAATGtggaaacaaaaaatgtttgagaaTTCATATGAAATTTCACCACACTCCCGAGAAACCGACTGCAAGTACGGTTTCCCAATGA
Protein Sequence: MIGLFQESPSYSSSYSQIKTEEEELDIKLEELHHSIDIKEETSPISIESQVVEQRTTETSAKRFTCELCDYKCTKKNLLKSHQRIHIGPKQFVCEFCDFKTTHKIQLNSHVIRIHTGEKQFACEFCDYRGVYKSDLRVHLLSHIGEKPLECKFCDFKTAHKGHFNIHLRTHTGEKPFACEFCDYRSRYKRYLTIHLSTHTGQKPFKCDFCDYKGAHKSCLYSHLRKKHSDVKPFACEICDYTTAHKGNLNSHVRTHTDPKPSDQETLKPALSEDNNAYEEFLKAYSKDYIPEKPFACEFCEFKSENKKNLNSHVRTHTNPKPDLSDNKNSYEEFLKAYSKDYIPEKPFACEFCDFKASQQKQLNSHVRIHNGGKPFACNLCDFRGIHRGDLRVHLRRHTGEKPFACEFCDYKTVQKGALNVHIRIHTGEKPFSCELCDYQAGTKRDLRIHQSTHTGEKPYSCEFCSFRSARKGHLNVHLKTHMEEKPFKCKFCEFRSEYNASLKAHLKTHTDVKPFACEFCDYRCALKGDLKTHLRSHPDAKPLVCEFCDYKTAQKGHFNIHRRIHTGQKPYACNSCDYRTSYKGDLIAHLRTPSDEKPVTCELCDYKCGNKKCLRIHMKFHHTPEKPTASTVSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271580;
90% Identity: -
80% Identity: -