Basic Information

Insect: Cantharis flavilabris
Gene Symbol: ZIPIC
Assembly: GCA_949152465.1
Location: OX424437.1:8124243-8126033[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.4e-05 0.00089 20.7 2.3 1 23 78 100 78 100 0.98

2 18 2.4 1.5e+02 4.2 6.0 1 19 106 124 106 129 0.91

3 18 0.043 2.8 9.7 1.0 1 23 135 158 135 158 0.96

4 18 3e-06 0.00019 22.8 4.1 1 23 163 185 163 185 0.98

5 18 0.00089 0.057 15.0 0.6 1 23 191 213 191 213 0.97

6 18 3.4e-05 0.0022 19.4 1.6 1 23 225 247 225 247 0.98

7 18 5.3e-06 0.00034 22.0 2.4 1 23 253 275 253 275 0.97

8 18 0.00063 0.04 15.5 1.8 1 23 281 303 281 303 0.98

9 18 0.00051 0.033 15.7 0.8 1 23 309 331 309 331 0.95

10 18 0.5 32 6.3 5.3 1 23 337 360 337 360 0.88

11 18 0.00012 0.008 17.7 3.0 1 23 366 388 366 388 0.98

12 18 0.029 1.9 10.2 1.9 1 19 394 412 394 417 0.90

13 18 0.0043 0.27 12.8 6.9 1 23 423 445 423 445 0.98

14 18 9.9e-05 0.0063 18.0 3.7 1 23 451 473 451 473 0.98

15 18 0.0024 0.16 13.6 4.0 1 23 479 501 479 501 0.98

16 18 0.015 0.97 11.1 0.9 1 23 507 530 507 530 0.90

17 18 2.3e-07 1.5e-05 26.3 1.5 1 23 536 558 536 558 0.98

18 18 2.3e-05 0.0015 20.0 5.4 1 23 564 586 564 586 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.4e-05	0.00089	20.7	2.3	1	23	78	100	78	100	0.98
2	18	2.4	1.5e+02	4.2	6.0	1	19	106	124	106	129	0.91
3	18	0.043	2.8	9.7	1.0	1	23	135	158	135	158	0.96
4	18	3e-06	0.00019	22.8	4.1	1	23	163	185	163	185	0.98
5	18	0.00089	0.057	15.0	0.6	1	23	191	213	191	213	0.97
6	18	3.4e-05	0.0022	19.4	1.6	1	23	225	247	225	247	0.98
7	18	5.3e-06	0.00034	22.0	2.4	1	23	253	275	253	275	0.97
8	18	0.00063	0.04	15.5	1.8	1	23	281	303	281	303	0.98
9	18	0.00051	0.033	15.7	0.8	1	23	309	331	309	331	0.95
10	18	0.5	32	6.3	5.3	1	23	337	360	337	360	0.88
11	18	0.00012	0.008	17.7	3.0	1	23	366	388	366	388	0.98
12	18	0.029	1.9	10.2	1.9	1	19	394	412	394	417	0.90
13	18	0.0043	0.27	12.8	6.9	1	23	423	445	423	445	0.98
14	18	9.9e-05	0.0063	18.0	3.7	1	23	451	473	451	473	0.98
15	18	0.0024	0.16	13.6	4.0	1	23	479	501	479	501	0.98
16	18	0.015	0.97	11.1	0.9	1	23	507	530	507	530	0.90
17	18	2.3e-07	1.5e-05	26.3	1.5	1	23	536	558	536	558	0.98
18	18	2.3e-05	0.0015	20.0	5.4	1	23	564	586	564	586	0.98

Sequence Information

Coding Sequence: ATGGATCTGGAACTGGTGCTCCCCGAAAAGTTGCAAATTATGGAAAGCATCAGTGAAGATGTTAAACTTCCGTAtgatttaattaacaatttcaaaattaaaatcgaagAGTTGGAAGATGTGAAATTTGATGTAGACGAtctgcatcattccattgacattaaagaagaatgCGATGTTAAGGAATTACCACAGAAGAAACCCGaaagaaattttaacagtttaaaTTCATTCGAATGTGGAATCTGCGGATGTAAAATTACACGTAAGGAATCGTTGAAACGACATTTAAGAACCCACACCGGAGACAAACCGTTTGCTTGTGAATTATGCGACTATAAATCTGCTCGTAAgtgtcatttaaaaattcattgcCTAAACAGTCACACCGACTATAAACCGTTTGCTTGCTTAATTTGTGACTACAAAAGTGCACACGAACCGAGTTTACGGGTGCATTTTAAAACCTACCACGGTGAGAAATCTTTTGTCTGTAAAATTTGTGGCCATAAATTTGCGAAAAACTCCAATTTAACAAGGCATTTTAAGACTCACACTGGTGAGAAACCGTTTGCCTGTGAAATTTGCGATTATAGATCGGCGCAAAAGATACATTTGCAATCGCATGCACTAACGCACACTGAGAACCTGTTGAGAAACATCGAGAAACAGTTTTCCTGCGAAGTTTGCGGTTACAAATGTGCGCAAAAATcagttttaaataaacatttgagGATCCACACAGGAGAGAAACCGTTTGCATGTGAATTGTGTGATCATAAATTCGcgcgaaattcaaatttgaaaatgcatttaaaaacccacaccggcgagaaaccattttcTTGTGAtatttgtgactataaaagTGCACACAAACCAACTTTAAGACTTCATTTGAAAactcacaccggggaaaaaTTGTTTTCCTGTATCATTTGTGATTCTAAGTTTGCCACAAAGGCCACTTTGAAAAATCATATCAAAactcacaccggggaaaaaccatTTGCTTGTGAATTGTGTGACTACAAATGTGCTCACAAAACAAGTTTGAAATACCACAATATTCACATTCACGCCGGCGAGACACCGTTTTCTTGTGAAACTTGTGACTATAAGTGTGCACAAAAATCTACCTTGGAAAATCATGTAAAAACTCACACCGGAGAGAAATCCTTTgcttgtgaaatttgtgactacAAATCTGCTCATAAATCAAGTTTACAATATCATAATGTACACGCTCACGCCGGCGAGACTCCGTTTTCTTGTGATCTGTGTGACTATAAATGTGTACGAAAATACAGATTACAGCATCACTTGAAAACTCACACCGGTGAGAAATCTTTTTGCTGCGACATCTGCGACTATAAGTATGCACACAAAGCAAGTTtacaaattcatttaaaaactcacacCGGGGAGAAGCCGTTTTCGTGTGaattttgtgactataaatgtgctCTAAAGTCCACCTTAAAAAATCATGTGAAAACTCACACCGGTGAGAAACCGTATCCCTGTAAACTTTGTGACTACAAATGTGCATACAAAGAAGGTTTAAAAGTTCATAATATAAATGCGCACACCGGTCAGAAGCCATTTTCCTGTGAAATTTGTGACCGTAAATTTGCGCGAAAGACTAATTTAAAAGTCCATTTAAAGACCCATTCAGACGAGAAACCGTTttcttgtgaaatttgtgactataagTCTGCGCACAAATCGCATTTGAAAAATCATATGAAAACTCACACCGGAAAGAGTACGCACAAAAATTCTAGTTAA
Protein Sequence: MDLELVLPEKLQIMESISEDVKLPYDLINNFKIKIEELEDVKFDVDDLHHSIDIKEECDVKELPQKKPERNFNSLNSFECGICGCKITRKESLKRHLRTHTGDKPFACELCDYKSARKCHLKIHCLNSHTDYKPFACLICDYKSAHEPSLRVHFKTYHGEKSFVCKICGHKFAKNSNLTRHFKTHTGEKPFACEICDYRSAQKIHLQSHALTHTENLLRNIEKQFSCEVCGYKCAQKSVLNKHLRIHTGEKPFACELCDHKFARNSNLKMHLKTHTGEKPFSCDICDYKSAHKPTLRLHLKTHTGEKLFSCIICDSKFATKATLKNHIKTHTGEKPFACELCDYKCAHKTSLKYHNIHIHAGETPFSCETCDYKCAQKSTLENHVKTHTGEKSFACEICDYKSAHKSSLQYHNVHAHAGETPFSCDLCDYKCVRKYRLQHHLKTHTGEKSFCCDICDYKYAHKASLQIHLKTHTGEKPFSCEFCDYKCALKSTLKNHVKTHTGEKPYPCKLCDYKCAYKEGLKVHNINAHTGQKPFSCEICDRKFARKTNLKVHLKTHSDEKPFSCEICDYKSAHKSHLKNHMKTHTGKSTHKNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271549;
90% Identity: iTF_00271549;
80% Identity: -