Cfla027183.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- ZFY
- Assembly
- GCA_949152465.1
- Location
- OX424439.1:2043115-2045908[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2.8 1.8e+02 4.0 1.3 1 22 126 147 126 150 0.89 2 17 0.0003 0.019 16.5 0.5 2 23 157 177 156 177 0.97 3 17 7.2e-05 0.0046 18.4 0.1 2 23 183 204 182 204 0.96 4 17 0.00019 0.012 17.1 5.0 1 23 209 231 209 231 0.98 5 17 0.45 29 6.5 2.6 1 23 262 286 262 286 0.88 6 17 0.0079 0.5 12.0 3.5 2 23 293 313 293 313 0.97 7 17 0.00051 0.032 15.8 0.4 2 23 319 340 318 340 0.97 8 17 3.6e-05 0.0023 19.4 1.5 1 23 345 367 345 367 0.99 9 17 6.5e-06 0.00041 21.7 0.3 2 23 376 397 375 397 0.97 10 17 7e-07 4.5e-05 24.8 1.0 1 23 403 425 403 425 0.98 11 17 0.88 57 5.6 0.0 1 13 431 443 431 445 0.88 12 17 0.0029 0.19 13.4 0.4 3 23 534 553 532 553 0.96 13 17 3.5e-05 0.0022 19.4 0.4 2 23 559 580 558 580 0.96 14 17 8.4e-05 0.0054 18.2 1.0 1 23 585 607 585 607 0.99 15 17 0.00016 0.01 17.3 1.3 2 23 615 636 614 636 0.97 16 17 2e-05 0.0013 20.2 2.3 1 23 642 664 642 664 0.98 17 17 3.3e-05 0.0021 19.5 1.6 1 23 670 693 670 693 0.96
Sequence Information
- Coding Sequence
- ATGGATCGGATGTGTCGGACGTGTTTGAAAGTTTCCAACCTCCTATTCGATTTATTTGTGGACGAATTACCGCACAAAATTGAGGCGATCTCATCGGTGCAAATTTTACTGGACGCTAGGTTTCcttgtaaaatttgtgaaaattgcTTACGCAACGTCCACCTGTTGTACGATTTTCGTAATCTTATTATCGAGAGTAATGTCACTTTGCTGCGAGATTGCATTAAGTCGGAACCCGAATCGCAGAGCAAAGTAAATGAAGAGGACGTGAATTTGGAACCCAAAGTAGAACTAGTCGCCTTGGATTCTTGTTTGACGAACGACTTGGAAGAAAGTAAACAAAATTCTAACCTTAAATTGGGAAAAAAGAAAGTTTATCGATGTGGTCAGTGCAGTTTTTCCACCTCTGTGTACAATTTGTGGAGGAATCACAACAGGAGTAGCACACATAAAGAGGCGGAGAAGGTGGTTTGCGAGGTGTGTGGGAAGGTCGTTACGAAACACAACGTGAAGAATCATATGCGAGTGCATACGGAAGGCCCGGTGTCATGCGAATATTGtggaaaagtttttaaaaatgtgggATCTTTGCGGGGGCACGTGTCTGTTCACGAGGGTCACCTCTTTCAGTGTAAAGTGTGCGGGAAAGTTTACAAAAACCGGAAAGGTTACACGAACCACAGACATAAACATAAACCCAGCGATGTCAAGTACGATTCGGACGAAACAAATTTAACTGTTGAAGGTCGAGAAAACGAAAGTTCTGATGGAGAAAAAGTTATTTATACCTGCAAGAAATGTGATTTTACGACTTCGGCTTATAATTTGTGGCGAAATCACAAAAGGAGTAAGTCTCATATAGGAGTGGAAAAAGCCGTGTGTAACGTTTGCGGGAAAATGGTTAGAAAAACCCACATAACCCATCACATTCGTACTCATACAGATTCACCGGTCACGTGCAAATTTTGCGATAAACAGTTTAAGAATGTGGGGTCTCTAAGGGGCCACCTATTGATTCACAAGGGAATTAATTATCAGTGTACAACTTGcggaaaaatttatgaaaacagAAAAGGCTACTCGGACCACATGAGAAGGCATAAATTGGGTGACGTAAAAACTGTGGAGTGCGGATTGTGCGGAAAAATGTTTTACGATAAACAAACGCTGGTGAAACATATCAGGAGCCATACCGGCGAGCGACCTTATCCTTGCGAGTACTGCAAGAAAGGATTTTCGAGCAGTAATGCTTTGAAAACTCACATCAGAAGGCATACAAATGAGAAACCGTTTGCCTGCGAATATTGTGATATGGCTTTTCCACAGAGGGTCCTGGAGGACGAGAGATTTCCATCGAAAATATGCGAAGAGTGCGTTAGGAATGTTCACCTTCTCTACGATTTTCGTAGCACAATCATAACTTCCAATCGGATGCTGGAGGAACGGTTCATCAAAACAGAAAGCGAGGAGTTGAATTTGGTGCTACCGAAAGTGGAAGTTCTTTTGTTGGAAGACACCGaaaacaaaagtgaagttgCCGATTGCAGTAGCATGGACGATTCGGACGACAAAAAAACTCAAGAGGTTACGAGATCGATTTGTAACGTTTGTGGGAaactaatttcaaaatataatttaaaaaaacacatcCTGACGCACACCGAGTCACCTGTATCGTGCAAATTTTGTGgaaaggaatttaaaaattcgggTTCGTTACGAGGGCACTTGCTGATACACAAGGGCATCCATTACGAGTGCACTGAGTGCGCAAAAATCTTTACAAACAGAAAAGGCTACACCGACCACATTAAGAGACATAAATtcaATTCCAAGACTATCGAGTGCTCCGTTTGTGATAAACGTTTTTACAGTAAATACAAACAGTCGGTCCACATGAGAAGTCACACGGGCGAACGACCGTATCCGTGCCAGTACTGCAAAAAGGGATTTTCAAGTGGCCACGCATTGAAAACGCACATACGGCGACACACGAAAGAAAAACCCTTTGCTTGTGAACATTGTAACATGGCATTTCCACAGAGGGTGTCGCTTAGGACTCACATGAAATCGAAACATCCAGATCGAGTTTTGGAACAGAGCAGTTCGACCCAAGACTAA
- Protein Sequence
- MDRMCRTCLKVSNLLFDLFVDELPHKIEAISSVQILLDARFPCKICENCLRNVHLLYDFRNLIIESNVTLLRDCIKSEPESQSKVNEEDVNLEPKVELVALDSCLTNDLEESKQNSNLKLGKKKVYRCGQCSFSTSVYNLWRNHNRSSTHKEAEKVVCEVCGKVVTKHNVKNHMRVHTEGPVSCEYCGKVFKNVGSLRGHVSVHEGHLFQCKVCGKVYKNRKGYTNHRHKHKPSDVKYDSDETNLTVEGRENESSDGEKVIYTCKKCDFTTSAYNLWRNHKRSKSHIGVEKAVCNVCGKMVRKTHITHHIRTHTDSPVTCKFCDKQFKNVGSLRGHLLIHKGINYQCTTCGKIYENRKGYSDHMRRHKLGDVKTVECGLCGKMFYDKQTLVKHIRSHTGERPYPCEYCKKGFSSSNALKTHIRRHTNEKPFACEYCDMAFPQRVLEDERFPSKICEECVRNVHLLYDFRSTIITSNRMLEERFIKTESEELNLVLPKVEVLLLEDTENKSEVADCSSMDDSDDKKTQEVTRSICNVCGKLISKYNLKKHILTHTESPVSCKFCGKEFKNSGSLRGHLLIHKGIHYECTECAKIFTNRKGYTDHIKRHKFNSKTIECSVCDKRFYSKYKQSVHMRSHTGERPYPCQYCKKGFSSGHALKTHIRRHTKEKPFACEHCNMAFPQRVSLRTHMKSKHPDRVLEQSSSTQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00270148;
- 90% Identity
- -
- 80% Identity
- -