Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:30522053-30524014[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.5e-05 0.0022 19.4 0.5 1 23 71 94 71 94 0.97

2 19 7.1 4.6e+02 2.7 3.8 2 20 120 138 120 141 0.91

3 19 0.046 3 9.6 0.4 1 23 147 169 147 169 0.93

4 19 0.00025 0.016 16.7 1.3 2 23 202 223 201 223 0.97

5 19 8.3e-05 0.0053 18.2 0.6 3 23 231 251 229 251 0.96

6 19 0.02 1.3 10.7 1.2 2 23 258 279 257 279 0.97

7 19 0.0002 0.013 17.0 4.3 1 23 285 307 285 307 0.97

8 19 0.0064 0.41 12.3 1.3 3 23 315 335 313 335 0.96

9 19 1.8e-05 0.0012 20.3 1.2 1 23 341 363 341 363 0.99

10 19 6.8e-06 0.00044 21.6 4.1 1 23 369 391 369 391 0.99

11 19 0.0043 0.28 12.8 2.2 1 23 398 420 398 420 0.98

12 19 2e-05 0.0013 20.2 1.2 1 23 426 448 426 448 0.97

13 19 0.0022 0.14 13.8 4.0 3 23 456 476 456 476 0.99

14 19 0.00029 0.018 16.5 1.8 1 23 482 504 482 504 0.98

15 19 2.2e-05 0.0014 20.0 7.0 1 23 510 532 510 532 0.98

16 19 0.0032 0.2 13.3 4.3 1 23 538 560 538 560 0.97

17 19 5.5e-05 0.0035 18.8 5.3 2 23 567 588 566 588 0.97

18 19 0.00025 0.016 16.7 3.3 1 23 594 616 594 616 0.98

19 19 0.00021 0.013 17.0 6.6 1 23 622 644 622 644 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.5e-05	0.0022	19.4	0.5	1	23	71	94	71	94	0.97
2	19	7.1	4.6e+02	2.7	3.8	2	20	120	138	120	141	0.91
3	19	0.046	3	9.6	0.4	1	23	147	169	147	169	0.93
4	19	0.00025	0.016	16.7	1.3	2	23	202	223	201	223	0.97
5	19	8.3e-05	0.0053	18.2	0.6	3	23	231	251	229	251	0.96
6	19	0.02	1.3	10.7	1.2	2	23	258	279	257	279	0.97
7	19	0.0002	0.013	17.0	4.3	1	23	285	307	285	307	0.97
8	19	0.0064	0.41	12.3	1.3	3	23	315	335	313	335	0.96
9	19	1.8e-05	0.0012	20.3	1.2	1	23	341	363	341	363	0.99
10	19	6.8e-06	0.00044	21.6	4.1	1	23	369	391	369	391	0.99
11	19	0.0043	0.28	12.8	2.2	1	23	398	420	398	420	0.98
12	19	2e-05	0.0013	20.2	1.2	1	23	426	448	426	448	0.97
13	19	0.0022	0.14	13.8	4.0	3	23	456	476	456	476	0.99
14	19	0.00029	0.018	16.5	1.8	1	23	482	504	482	504	0.98
15	19	2.2e-05	0.0014	20.0	7.0	1	23	510	532	510	532	0.98
16	19	0.0032	0.2	13.3	4.3	1	23	538	560	538	560	0.97
17	19	5.5e-05	0.0035	18.8	5.3	2	23	567	588	566	588	0.97
18	19	0.00025	0.016	16.7	3.3	1	23	594	616	594	616	0.98
19	19	0.00021	0.013	17.0	6.6	1	23	622	644	622	644	0.99

Sequence Information

Coding Sequence: ATGGAAAACGTGGCACTACCAGAAGAGACTCAAAATGAGGAATCGATTGCAGATAATTcaagatttgaaattaaaaacgaaaactTCGAATTGAAGTTGGAAGATTTACACCATACgattgatattaaagaagagTGGATACCCCTGGATGAGGATGATGTGGAAACACCCAACAACACGATTTTAGATTATGAAGTACCTCAAACCCTATTTCCCTGtgaaacatgtggcaacaattaTTCGAACAATGAGAATCTGATCCAACATTTGAAAACACGTCATCAACATTTAGGAAGTCATGAAGAAGAGATCCCTTTTGAGACTCATTTACAATGTGAAACAGAGGAGGAGGCGAACGAGTGTGTAttgtgcgattataaatgttccacCGGAAGTCAGCTGGTTGAACATTTTAAATGCCATATCGAAGAACAATCGTTTCTATGTggaatttgtgattataaaagtTTGACGAAAGAATATCTAGAAATCCATTTGAAGACACACGATGAAGAAAAGCCGCTTGAACATAAAGGTTCTGATAGCTTAATCACAGGTACGGTATCACTTAATTTAACTGCTGAAACTTCCGAGAAATCATTGTCGTGCGAAGTTTGTCACGAAAAGTTTTCTACTAGTACAGACATGGACGTACATTTAAGAACCCACACGGATTACAAGCTTTTGttttgtgaaatttgtgactacAAAACTTCgcaaaaaggaaatttaaagctacatttaaaaattcattcagGCGAAAAACCATTATCATGCGAAATTTGTAAGAGAAATTTTGCCGCGGGTACGCACATGGATCGGCACTTACGAACGCATacgggcgaaaaaccgtttgctTGTTcgttttgcgattataaatgttcgacTAAGGGTTATCTCAAGGTACACATGAAAAGGCACACGAAGGATAAACCATTCGGGTGTAAAATTTGCGAGTATAAATCTTTAACTAAAATTCAGTTGACCAGACATATGCGTACgcatacgggggaaaaacccTACGAATGTGAAGTTTGCGGGTACACATCGGCAACTAAACATTTGCTGAATCGGCATTTAAGCACTCACACCGGAGAGAAATCTTTTGAGTGTGAAACATGTGGATGTGAATTTGCAAGCAAAAGTTGTCTCAGGGTTCACATGCGAACGcattttaaagttgaaaaatcaTTTGTATGTGAAATTTGCGActgtaagtttttatttaaaagtcagCTGGAGATTCATCTTAAAAATCATTCTGGCCAGAAACCATTTGCGTGTACGGTTTGCGATtacagatgtgtaaataaaggTAATTTGACCATTCATGTACGAACTCATTTTGGGGAGAAACTGTTATGGTGTGACACGTGTAACAAAAGCTTTTCGAAAGGTACGCACATGGATCGACATATTAGAACTCATACAGGTGAGAAACCATTTTCCTGCGGATTTTGTCCTTACCAATGTGCGACTAAAAGTTATTTACAAGTGCACTTACGAATCCATTCGGGGGAAAAACCTTATACATGCAACACCTGTGGTTACAAATGCTCAACTAAAAGTCATTTGATGAAACACCTAAGATTGCATTCGGCCGAAAATTTGTTTGCATGCAAATTGTGTGATTACAAATGCTCGTACGAAGGTGATCTAAAGCATCATTTAAGTACTCATACGGATGAGAAGTCATTGGtgtgtgaaatttgtaaaaaacatttttcgaGAAGGACCCATATGGATCGACATATAAGGAcacatacgggcgagaaaccgttcaCTTGCAATATTTGTAGCTACAAGTGTTCAACCAAAGGTTATCTTAAAGAACATTTGCAAATCCATACGGGGAAAAAACcgtttaaatgtaatatttgcgACTGTaaattttcaaccaaaaatTATCTCAGTAAGCACTCAAAAACTCATAGAAACAAAAATTCGGTTGCGAGGTCTTAA
Protein Sequence: MENVALPEETQNEESIADNSRFEIKNENFELKLEDLHHTIDIKEEWIPLDEDDVETPNNTILDYEVPQTLFPCETCGNNYSNNENLIQHLKTRHQHLGSHEEEIPFETHLQCETEEEANECVLCDYKCSTGSQLVEHFKCHIEEQSFLCGICDYKSLTKEYLEIHLKTHDEEKPLEHKGSDSLITGTVSLNLTAETSEKSLSCEVCHEKFSTSTDMDVHLRTHTDYKLLFCEICDYKTSQKGNLKLHLKIHSGEKPLSCEICKRNFAAGTHMDRHLRTHTGEKPFACSFCDYKCSTKGYLKVHMKRHTKDKPFGCKICEYKSLTKIQLTRHMRTHTGEKPYECEVCGYTSATKHLLNRHLSTHTGEKSFECETCGCEFASKSCLRVHMRTHFKVEKSFVCEICDCKFLFKSQLEIHLKNHSGQKPFACTVCDYRCVNKGNLTIHVRTHFGEKLLWCDTCNKSFSKGTHMDRHIRTHTGEKPFSCGFCPYQCATKSYLQVHLRIHSGEKPYTCNTCGYKCSTKSHLMKHLRLHSAENLFACKLCDYKCSYEGDLKHHLSTHTDEKSLVCEICKKHFSRRTHMDRHIRTHTGEKPFTCNICSYKCSTKGYLKEHLQIHTGKKPFKCNICDCKFSTKNYLSKHSKTHRNKNSVARS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271528;
90% Identity: iTF_00271528;
80% Identity: -