Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424437.1:3403563-3446159[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.3e-05 0.0021 19.5 0.6 1 23 118 140 118 140 0.98

2 19 5.4e-05 0.0035 18.8 2.7 1 23 219 241 219 241 0.99

3 19 0.00024 0.015 16.8 2.0 1 23 247 269 247 269 0.98

4 19 0.0038 0.24 13.0 0.9 1 23 275 297 275 297 0.97

5 19 0.0001 0.0064 18.0 3.0 1 23 397 419 397 419 0.97

6 19 0.00042 0.027 16.0 4.0 1 23 425 447 425 447 0.97

7 19 3.1e-05 0.002 19.6 2.0 1 23 453 475 453 475 0.98

8 19 0.00016 0.01 17.3 2.8 1 23 564 586 564 586 0.95

9 19 0.0022 0.14 13.7 4.0 1 23 592 614 592 614 0.97

10 19 0.03 1.9 10.2 4.0 1 23 699 721 699 721 0.98

11 19 0.0011 0.073 14.6 3.6 1 23 727 749 727 749 0.98

12 19 0.028 1.8 10.3 3.1 1 23 755 777 755 777 0.99

13 19 0.00075 0.048 15.2 1.4 1 23 783 805 783 805 0.98

14 19 0.00012 0.0077 17.7 2.7 1 23 811 833 811 833 0.98

15 19 7.2e-06 0.00046 21.6 4.3 1 23 839 861 839 861 0.99

16 19 0.0013 0.081 14.5 1.8 1 23 947 969 947 969 0.98

17 19 6.2e-05 0.004 18.6 0.2 1 23 975 997 975 997 0.99

18 19 1.2e-06 8e-05 24.0 5.6 1 23 1003 1025 1003 1025 0.99

19 19 0.0014 0.092 14.3 2.2 1 23 1040 1063 1040 1063 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.3e-05	0.0021	19.5	0.6	1	23	118	140	118	140	0.98
2	19	5.4e-05	0.0035	18.8	2.7	1	23	219	241	219	241	0.99
3	19	0.00024	0.015	16.8	2.0	1	23	247	269	247	269	0.98
4	19	0.0038	0.24	13.0	0.9	1	23	275	297	275	297	0.97
5	19	0.0001	0.0064	18.0	3.0	1	23	397	419	397	419	0.97
6	19	0.00042	0.027	16.0	4.0	1	23	425	447	425	447	0.97
7	19	3.1e-05	0.002	19.6	2.0	1	23	453	475	453	475	0.98
8	19	0.00016	0.01	17.3	2.8	1	23	564	586	564	586	0.95
9	19	0.0022	0.14	13.7	4.0	1	23	592	614	592	614	0.97
10	19	0.03	1.9	10.2	4.0	1	23	699	721	699	721	0.98
11	19	0.0011	0.073	14.6	3.6	1	23	727	749	727	749	0.98
12	19	0.028	1.8	10.3	3.1	1	23	755	777	755	777	0.99
13	19	0.00075	0.048	15.2	1.4	1	23	783	805	783	805	0.98
14	19	0.00012	0.0077	17.7	2.7	1	23	811	833	811	833	0.98
15	19	7.2e-06	0.00046	21.6	4.3	1	23	839	861	839	861	0.99
16	19	0.0013	0.081	14.5	1.8	1	23	947	969	947	969	0.98
17	19	6.2e-05	0.004	18.6	0.2	1	23	975	997	975	997	0.99
18	19	1.2e-06	8e-05	24.0	5.6	1	23	1003	1025	1003	1025	0.99
19	19	0.0014	0.092	14.3	2.2	1	23	1040	1063	1040	1063	0.96

Sequence Information

Coding Sequence: atgaTCAAAATTTTACCCCTTCATTTAAACCTTTTGACCTTTGGGGCCAACACGTGGACGCCGGCTAGCCATCCTGCAGTACTACAATTAAAGCTGTTACTAACGAAGTGTTTGTTACAGGAAACTCCGAACCATTCAAATAGCTGCACCCAAATCAAGTCTGAAGTCGAAGAAACGGAATTTGAGCTGTTAGATTTGCATCACTCCGTCGACATTAAAGAAGAGCCTGTAATTCTCAAATCTCAATCGGATAGGGAATGTAAACCCGAAACAGTCGACGACTCGTTTATATGCAAAGACGAAGACTATAAATATGCATATCAATTAAAACCCTTAATTGGGAAAAAACCGTTTGTATGCGAAATTTGTGGCTACGGTTGTAAGCAAAAAGCCACCTTGGACATTCACATCAGAACTCACACCGTGACCCAAATCAAGACGGAAGAAGAGGAAACGGAACTGAAGCTGGTAAATTTGCATCATTCTatcgacattaaagaagaaaccGTATTTTTCGATGCGCAACTGGACACTGAATGTAAGCTAGAAACAACTGGGACGCCGTTTAAGGACGAGGTCCTGGATTATAAATATGCGCAAGGAGGAAGTtcgaagatttatttaaaaaatcaaactgGTGGCAGCGATAAACCGTTTACTTGTGAAATTTGTGGCTACTGCTGTAAACAGAGAGGAGTTTTGGAAATTCACAtaagaactcataccggggaaaaaccgttttcgTGTGACATTTGTGGATTTAAATGTGCACGTAAGGATGGATTAAAAAGTCATTTGACTACCCATAGTGGCGAGAAAACGTTTGCATGCGGAATTTGTGAGTATAAATGTGCACTGAAGGAAATGTTAAAAATTCACTTGAGAACCCAttctggcgaaaagccgttCAAGTCAAAAATGGCAGCCTACCGTAAACACTTGTACTTACTTACTACGATAAAATTTAATCTGTTGCTGATGATGCGTTTGTTCCAGGAAACACCGTATCATTCCGATAGCCTCTTTCCAATTAAGACTGAAGTAAAAGAAGAAGCTGAATTTGATTTAgaagatttgcatcattccatcgacattaaagaagaagCTAATATCGAAGTTCAACCGAATGAAAAATTCCAACCGGAAGACTTGAAACTTGATGTAGGCACCCTTAACAGCGAAAAAccttatttttgtaatatttgtgattataaatgtgcacgtaAAGATCAATTAACCCGACATTTAACAATTCATACAGATGACAAACCGTTTGCGTGTGAACTTTGTTCTTACAAATGTTCACGTAAAGAACTTTTAAAAAGGCATTTAAAAACTCATGCGCGGGAAAAACCGTTCACCTGTGATACTTGCGGTCGGAATTTCACTGAAAGCGCTCATTATAAAGTTCATTTGAGAATTCAcaccggcgaaaagccgttcGAACCACCGGGCCATTCCGATAGCTGCTTTCAGATCAAGACAGAAGTAGAAGAAGAAACTGGATTTGAGTTGGGagatttgcatcattccatcgacatAAAAGAAGAAGCGAATATCGAACCTCAACCGAATGGAGAATGCAAACCGGAAACGAGCGTCAAACCTTCTATGTGTGAAGGCTGGGACTACGCATACATACCTGATGGAGATGTAAAAACTGATGTAGAGGCTCCTAACGAGAAACCGTTTTTGTGCAACATTTGTGATTACAAATGCGCACGGAAAGGACAATTAACCAGACATTTAACAACTCATACAGATGAAAAACCGTTTGCATGTGAATTTTGCGTCTACAAATGCTCACGCAAAGAACTTCTAAGAAGACACTTAAAGACTCACACAGGGGAAAAACCGTTCACTTGTGAAACTTGTAATCAAAATCGTTTGATTCGACGAGTGATGACTGATCAGGTTATTTTACCGCAGTTTGTCCAGAAAATGGAAACTCCGGCCTACTCCCAAATTAAGACAGAAGAAATAGAAATCAAGTTGGAAGATCTGCACCATGCCATCGACATTAAGGAGGAGCAGACTTCAGTTTTGGTAACCACACCGAAGAGGGAGTGCAAACCGCAAACGAGCATCAAAGCGTTTTCGTGTAAGgtttgcgattacaaatgtaATCGGAAAGGAATTTTCGAAACTCATTTACGAACTCACAGTGGAGAGAAACCATTCATGTGTGAATTCTGTAATTATACTTGTGCACAGAAGCCAAGTCTAAAGAGACATTTAACCACCCACACGGGCGACAAACCCTTTACCTGCGAAATATGCGCTTACCGATGTGCACAAAGCGGGGATTTAAAATGCCATATAAGAACTCACACTGGCGAAAAACTATTCGAGTGTGAAAGGTGTGACTATAAGAGTGCACATAAAGGAAGTTTGGAAAGTCACGtaagaactcatactggcgagaaaccgtatatGTGTGAATTCTGTGACTACGCATGCGCACAGAAAACTAGTCTAAAGAGACATTTGATGACTCATAGCGGGGATAAACCGTTTACTTGTGAATTTTGCGACTATACTTGTGCGCAGAAGTCAAGTTTAAAGAGGCATATGATGACTCATACAGATATATTATATTCTCAAATTAAGACGGAAGAAATTGAATTCAAGTTGGACGACTTGCACCATTCCGTGGAGGTTAAAGAAGAACAACCAGAAACGAGCAGTCGAGAAGTACCTCTCCATTCAAATATTAAGACCGAAGAAATTGAATTTAAGTTTGAAGATTTACATCATTCCATCGACATAAAAGAAGAGACTTTGATTGTAGAATCTCAACAGGATAAAGAATGCAAACCAGAAACAATCAGTAAACCGTATGCGTGTGAAAGTTGCGAATTCAAATGTGCATATCAAAGTAACTTAACAAATCATTTGAGAATTCATACTGGTGAGAAACCATATACTTGTGAAATTTGCGGCATCCAATATGCccaaattggaaattttaaaaatcatgtaaGAACTCATACTGGGGATAAACCATATAAGTGTGATATTTGTAATCATAAATTTACACAACAGTACAGCTTGAAACGGCATTTGAGAAcccatactggcgagaaaccgtttagaactcatactggcgagaaaccgtttgctTGTGAATTTTGTGATTACAAATGTGCGTATAAGGAGAGTTTGAAAAGACACATATCAAGAGCTCATACCGGCCAGAAACAGTCTGGTAGCTAA
Protein Sequence: MIKILPLHLNLLTFGANTWTPASHPAVLQLKLLLTKCLLQETPNHSNSCTQIKSEVEETEFELLDLHHSVDIKEEPVILKSQSDRECKPETVDDSFICKDEDYKYAYQLKPLIGKKPFVCEICGYGCKQKATLDIHIRTHTVTQIKTEEEETELKLVNLHHSIDIKEETVFFDAQLDTECKLETTGTPFKDEVLDYKYAQGGSSKIYLKNQTGGSDKPFTCEICGYCCKQRGVLEIHIRTHTGEKPFSCDICGFKCARKDGLKSHLTTHSGEKTFACGICEYKCALKEMLKIHLRTHSGEKPFKSKMAAYRKHLYLLTTIKFNLLLMMRLFQETPYHSDSLFPIKTEVKEEAEFDLEDLHHSIDIKEEANIEVQPNEKFQPEDLKLDVGTLNSEKPYFCNICDYKCARKDQLTRHLTIHTDDKPFACELCSYKCSRKELLKRHLKTHAREKPFTCDTCGRNFTESAHYKVHLRIHTGEKPFEPPGHSDSCFQIKTEVEEETGFELGDLHHSIDIKEEANIEPQPNGECKPETSVKPSMCEGWDYAYIPDGDVKTDVEAPNEKPFLCNICDYKCARKGQLTRHLTTHTDEKPFACEFCVYKCSRKELLRRHLKTHTGEKPFTCETCNQNRLIRRVMTDQVILPQFVQKMETPAYSQIKTEEIEIKLEDLHHAIDIKEEQTSVLVTTPKRECKPQTSIKAFSCKVCDYKCNRKGIFETHLRTHSGEKPFMCEFCNYTCAQKPSLKRHLTTHTGDKPFTCEICAYRCAQSGDLKCHIRTHTGEKLFECERCDYKSAHKGSLESHVRTHTGEKPYMCEFCDYACAQKTSLKRHLMTHSGDKPFTCEFCDYTCAQKSSLKRHMMTHTDILYSQIKTEEIEFKLDDLHHSVEVKEEQPETSSREVPLHSNIKTEEIEFKFEDLHHSIDIKEETLIVESQQDKECKPETISKPYACESCEFKCAYQSNLTNHLRIHTGEKPYTCEICGIQYAQIGNFKNHVRTHTGDKPYKCDICNHKFTQQYSLKRHLRTHTGEKPFRTHTGEKPFACEFCDYKCAYKESLKRHISRAHTGQKQSGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -