Basic Information

Insect: Cantharis flavilabris
Gene Symbol: -
Assembly: GCA_949152465.1
Location: OX424438.1:14796862-14802073[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00034 0.021 16.3 2.4 1 23 408 430 408 430 0.96

2 18 0.00015 0.0094 17.5 1.3 1 20 436 455 436 458 0.94

3 18 3.5e-05 0.0023 19.4 0.8 1 23 464 486 464 486 0.98

4 18 0.00066 0.042 15.4 4.4 1 21 492 512 492 514 0.95

5 18 6.2e-05 0.0039 18.6 4.6 1 23 520 542 520 542 0.99

6 18 5.9e-05 0.0038 18.7 5.3 1 23 548 570 548 570 0.97

7 18 9.9e-06 0.00063 21.1 7.2 1 23 576 598 576 598 0.97

8 18 2.3e-07 1.5e-05 26.3 2.7 1 23 604 626 604 626 0.98

9 18 0.00017 0.011 17.3 6.7 1 23 632 654 632 654 0.97

10 18 0.00016 0.01 17.4 4.7 1 23 660 682 660 682 0.97

11 18 1.1e-06 7e-05 24.2 2.8 1 23 688 710 688 710 0.98

12 18 7.9e-05 0.005 18.3 8.1 1 23 716 738 716 738 0.98

13 18 1.1e-06 7.1e-05 24.1 5.5 1 23 744 766 744 766 0.98

14 18 4e-05 0.0025 19.2 7.7 1 23 772 794 772 794 0.98

15 18 2.6e-05 0.0016 19.8 7.1 1 23 800 822 800 822 0.97

16 18 0.00022 0.014 16.9 0.4 1 23 828 850 828 850 0.98

17 18 0.06 3.8 9.2 5.1 1 23 860 882 860 882 0.98

18 18 1.6e-06 0.0001 23.6 0.9 1 23 888 910 888 910 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00034	0.021	16.3	2.4	1	23	408	430	408	430	0.96
2	18	0.00015	0.0094	17.5	1.3	1	20	436	455	436	458	0.94
3	18	3.5e-05	0.0023	19.4	0.8	1	23	464	486	464	486	0.98
4	18	0.00066	0.042	15.4	4.4	1	21	492	512	492	514	0.95
5	18	6.2e-05	0.0039	18.6	4.6	1	23	520	542	520	542	0.99
6	18	5.9e-05	0.0038	18.7	5.3	1	23	548	570	548	570	0.97
7	18	9.9e-06	0.00063	21.1	7.2	1	23	576	598	576	598	0.97
8	18	2.3e-07	1.5e-05	26.3	2.7	1	23	604	626	604	626	0.98
9	18	0.00017	0.011	17.3	6.7	1	23	632	654	632	654	0.97
10	18	0.00016	0.01	17.4	4.7	1	23	660	682	660	682	0.97
11	18	1.1e-06	7e-05	24.2	2.8	1	23	688	710	688	710	0.98
12	18	7.9e-05	0.005	18.3	8.1	1	23	716	738	716	738	0.98
13	18	1.1e-06	7.1e-05	24.1	5.5	1	23	744	766	744	766	0.98
14	18	4e-05	0.0025	19.2	7.7	1	23	772	794	772	794	0.98
15	18	2.6e-05	0.0016	19.8	7.1	1	23	800	822	800	822	0.97
16	18	0.00022	0.014	16.9	0.4	1	23	828	850	828	850	0.98
17	18	0.06	3.8	9.2	5.1	1	23	860	882	860	882	0.98
18	18	1.6e-06	0.0001	23.6	0.9	1	23	888	910	888	910	0.96

Sequence Information

Coding Sequence: ATGAGTTCTAACGAACAGAATCATCTGAATGGAGCACCATCAAATGAAAATTCCGAAggATTACAAAAGCCACCTGCGGTTACAATACCCACAGATCTAAGAGTCAATACTACGGCTTTAAATCCTGTAGCGCTGAGTAGTGTTGCTAAATACTGGGTCCTTACAAATTTTCTGCCAGGACCGATTCCTCAAGTGTCCGTTTATGATTTGTCAAATCCTACCCGTGCTGACAATCAGACCAAAATGGCACAGGATATGTTTGGTCAACATGGGCTCTTAGCAGATCAACTACTTTTACCACAGCATGCTCAAATACCCGTTAGTATATCTACTACTCAAGCCCTCACAAACCTAGCAATTCCAGCAAGTGCAATGCATCTAGAAAATCCTTCTAATCACAACCAAACATCATCAAATCATCAGCAATCCGAAGGACAAACTATTGTCTCTCAAGCCCAAACGCAGCTCTCTCATTCTCAACTACACAGCACACAACAAAATCAGCAGcaacaaaatattattcaagTTCAAGATAATTTAGTTTCAGTTATTGAAGACAGCAAAGACCACAAAGACTTAATAGCATCACAAATAGCACAAGCTCAAATTCATTTAGCCGAAACTCAACAACAGTTAAATCAACAAACTTTAACTGTACAGCAACTGCAACAGCTGCAAGTTCAGCAAGTTTTGGACAATGTAGTTCGAATGGAAAGTGCAGAAAACGAACAAACTCAAAGAAATTCGGAACACGATCCCCTATCAAACTCGGATGGTTTGCAAATAGTAAAAGACGAAAAGAATCTACAAAATTGTTCCAAGTTGCTCAGTAGTACTCAATTTGGTTTACAAGACATTAAAACCAACTTGATGGATGTACGCACGCCCGACGGTAGCATAGTTAAAATTTCAGCTGGATTGCAAGAACAAGACTTAGCTAAAACTCTAGGAATCGAAATGGTCCAAAACATGTACAAAGTTAACGTAGAAGAGATAAATCAATTATTAGCATATCACGAAGTTTTTGGTAAAATACAAGGTGAACTTGCAACAGGTCAGAGTAACGTCACTACAAACAACAGTAATGTTAATATACAGCAAAGTGCTACTGCAATTGCTAACAATATTCACATTGTTACGCCCAAAACGTTGGTGGAAAATGACCAGGAAACTGCGAGTTCTACCACAGCGGATGGTGTGGTAACCATCGCAACTGGAAATCATATTTGTGACTTGTGTGGGAAAATGTTTCAGTTTCGTTATCAGTTAATTGTGCACAGACGTTATCACATTGAAAGGAAACCCTTTACCTGTCAAGTTTGTGGTAAGGCGTTTATTAATGCACAGGAATTGACTAGGCACGGTAAATGTCATCTAGGAGGTAGCATGTTTACTTGTGCCGTGTGTTTCCACGTTTTTGCAAATGCAGCTTCTCTGGAGCGCCATATGAAACGTCACTCGACGGATAAACCTTACAATTGTACTACTTGTGGAAAAGCTTTTGCTAGAAAAGAACATTTAGATAATCATACTAGGTGCCATACGGGAGAGACTCCTTACAGATGCCAATATTGTGCAAAAACTTTTACTAGGAAAGAACACATGGTTAATCATGTTCGTAAACATAcagGTGAAACCCCTCATCGgtgcgaaatttgtaaaaagtcGTTTACAAGAAAAGAACATTTTATGAATCACGTTATGTGGCATACGGGAGAAACCCCACATCATTGCACGATTTGCGGAAAGAAATATACAAGGAAGGAGCATTTGGCTAATCACATGCGATCACACACAAACGATACACCATTTAGATGTGAAATTTGTGGTAAATCGTTTACTAGGAAAGAACATTTTACAAATCACATCATGTGGCATACAGGTGAAACGCCCCATAGATGTGATTTCTGTTCAAAAACGTTTACCAGAAAGGAACATCTGCTGAATCACGTTCGTCAGCATACGGGTGAATCGCCTCATCGATGTGTTTATTGTGCCAAGTCCTTTACTCGTAAAGAACATCTTGTCAATCACGTGCGACAACACACAGGGGAAACGCCCTTCCGTTGCAGTTATTGTCCAAAAGCATTCACAAGAAAGGATCACTTGGTAAATCACGTAAGACAACATACTGGAGAATCTCCCCATAAATGTACGTTTTGCACGAAATCTTTTACGAGGAAGGAACATTTAACGAATCATGTGAGGCAGCATACAGGCGAATCGCCGCATCGGTGTCCTTATTGCTCAAAATCGTTCACAAGAAAAGAACACTTAACCAATCATGTACGCATTCATACAGGCGAATCACCGCATCGGTGCGAATTTTGCCAGAAAACTTTCACCAGGAAGGAGCATCTGACAAATCATTTGCGTCAACATACTGGTGAAACACCGCACTGCTGTAATGTGTGCTCTAAACCATTTACCAGAAAAGAACACCTAATCAATCACATGCGTTCACATACTGGAGAGCGGCCATTTTCCTGTGGAGAATGTGGAAAATCGTTTCCACTTAAAGgtaatttattatttcatcagAGATCTCATAATAAAGGTGCTGAAGCGGATAGGCCATTTAGATGCGATCTTTGCGATAAAGACTTCATGTGTAAGGGACATCTGGTGTCGCATCGAAGATCACACAGTGGTGAACGACCTCATGCTTGTCCGGATTGTGGTAAAACGTTTGTGGAAAAAGGTAACATGTTAAGACATTTAAGAAAGCATGCACTTGAAAATGGATCTCAACCTAATGCGGCAAACCAAATAACACAAGTCACCACTAACCAAGTTAATCAAACACAACCCAGTGCTGTACCGGTGCAAACTTCGGTGGCAACTACTATTCAAATACCGCAAGTTAGTCAAAGTCAAACGTTAACGAATTCTACGCCCGCCAGTAATATAATAAGTAGTGGAAATATCGTACAACAAACTCATTTACCCATTCATCAGCAAAATAATCATTCGGTAGTTGTTCCTACTGcaaatagtaataatatacTGGCTtcgtattcataa
Protein Sequence: MSSNEQNHLNGAPSNENSEGLQKPPAVTIPTDLRVNTTALNPVALSSVAKYWVLTNFLPGPIPQVSVYDLSNPTRADNQTKMAQDMFGQHGLLADQLLLPQHAQIPVSISTTQALTNLAIPASAMHLENPSNHNQTSSNHQQSEGQTIVSQAQTQLSHSQLHSTQQNQQQQNIIQVQDNLVSVIEDSKDHKDLIASQIAQAQIHLAETQQQLNQQTLTVQQLQQLQVQQVLDNVVRMESAENEQTQRNSEHDPLSNSDGLQIVKDEKNLQNCSKLLSSTQFGLQDIKTNLMDVRTPDGSIVKISAGLQEQDLAKTLGIEMVQNMYKVNVEEINQLLAYHEVFGKIQGELATGQSNVTTNNSNVNIQQSATAIANNIHIVTPKTLVENDQETASSTTADGVVTIATGNHICDLCGKMFQFRYQLIVHRRYHIERKPFTCQVCGKAFINAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCTTCGKAFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCVYCAKSFTRKEHLVNHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCPYCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFSCGECGKSFPLKGNLLFHQRSHNKGAEADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRKHALENGSQPNAANQITQVTTNQVNQTQPSAVPVQTSVATTIQIPQVSQSQTLTNSTPASNIISSGNIVQQTHLPIHQQNNHSVVVPTANSNNILASYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00951115;
90% Identity: iTF_01294073;
80% Identity: -