Cfla032447.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- -
- Assembly
- GCA_949152465.1
- Location
- OX424440.1:19979448-19982213[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-07 7.2e-05 23.5 0.0 5 40 19 54 15 57 0.90
Sequence Information
- Coding Sequence
- ATGGTTCGACGCAGGATTAAGGAACGCTCTAAAGCTCGTTTCACCGAAAAAATGATGTCAGGTGCTGTTAAATCGGTCGTCGAAGAAGGCTTATCACTGCGAAGTTCGGCACAACTACACGGAGTAAAATTTACAACTCTGCAGAGATACGTTCGTAAGAAAAAAAGTAATCCAGAAGTAAATGTTAGAATGGCACCTAATTATGCAGCACGACTTATTTTTTCTCACGAACAAGAGGTCGAATTATCCAGATGcttaaaaatatgtagtaaaATGAGTTACGGTTTGACTACACGCCaagttaaaaaattgtcttatGAGATGGCCAtacgtaaaaaaataaaattaccttcCAGTTGGGATAATAATAAATGCGCAGGAAGAGATTGGTTGATGGCCTTTATAAAGAGATGTGGTAGATTAAGCATAATAAAACCTCCAAGTGTCTGTAGCTTATCGCGTTTACCCTTGATTAATCcacattatgtaaataaatatttttcaaatttggaaGAAATTTTAACGGCAATTCCAGATTTGATAACAAATaacagaatttataatttaggcGAAATAAGCATGACGACTGTTGAGAAACTCGAAAAAGATATAACAGAAAATGAAGTTAAATCCGTTTCTGGCGACGAAGCAGGTGCAATAGTTACTACTTGTGCTATTATTTGTACCGATGGTACTTTTTTTCCGCCAGTAATGTTATTCCCGAAAATACATTTAACACAAAATGTAATGATCACCAACGGGGCTCCAGAAGGAACGTTCGGTTTTGCTACTCCAAATGGTTGCACGACTCAGAGTTCATTCACCATAGCTTTAGATCATTTCATACGTCTCTCTTGCAGTTCAAAAAACAATCCAACTCTTTTGATATGCGACAGCCAAGAAAGTCATATATCCATTAGTGCAGTCAATCGGGCGATAGAATCAGGAGTAATCTTTCTTACGCTCCCACCcaacagcaaaaataaattgcaacCTTTAGATGTATCAGTTTTTACACAATTTAAGACTTCCTACAATTTGGCGATGGAATCATGGGTATCAAATCATCCAGAGAATCCCTTTACCATCAATCAAGTAGCTTCCTGTGTTGGTGAAGCTTATTCAAACGCTTTCACATCGGACAATATTTTACTTGGATTTAAGAACACCGGCATTTTtccattcaataaaaatattttagagacTGATACCGATTTTCAAATGAGTTCGGTGAGTCATGCATCGAGATGCCTGGACGAAGGACAAAATACAAGATCCGAATTTGACAATTTTGATCAACCAGGACCATCTAAATCAAGACAGCAAGATGTCGAACCAAGAATATCTTCTCTATATTTTACAGCGCATGAAGAATTTAAAGTTTCAGATTTTGTTTCCAATCTAGAAATCAAAAAAGGTCTAATAGAATTCGAAGACATTTCAGATGAGTTTTACGAGTTTTATGCCAAACAACGTTCTTCGGATGTATATAAAAGTCGCCTGCTTCCTACAAAAGACGCCTTCGTACTTATCAAACTGTTGCAGAACCAAGTTCCGTTTTATTTTATCGCCCTAGTTGTGGCGTCTTTCTTGATTGACAATCAATATGGTTAA
- Protein Sequence
- MVRRRIKERSKARFTEKMMSGAVKSVVEEGLSLRSSAQLHGVKFTTLQRYVRKKKSNPEVNVRMAPNYAARLIFSHEQEVELSRCLKICSKMSYGLTTRQVKKLSYEMAIRKKIKLPSSWDNNKCAGRDWLMAFIKRCGRLSIIKPPSVCSLSRLPLINPHYVNKYFSNLEEILTAIPDLITNNRIYNLGEISMTTVEKLEKDITENEVKSVSGDEAGAIVTTCAIICTDGTFFPPVMLFPKIHLTQNVMITNGAPEGTFGFATPNGCTTQSSFTIALDHFIRLSCSSKNNPTLLICDSQESHISISAVNRAIESGVIFLTLPPNSKNKLQPLDVSVFTQFKTSYNLAMESWVSNHPENPFTINQVASCVGEAYSNAFTSDNILLGFKNTGIFPFNKNILETDTDFQMSSVSHASRCLDEGQNTRSEFDNFDQPGPSKSRQQDVEPRISSLYFTAHEEFKVSDFVSNLEIKKGLIEFEDISDEFYEFYAKQRSSDVYKSRLLPTKDAFVLIKLLQNQVPFYFIALVVASFLIDNQYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00271041; iTF_00269711; iTF_00272440;
- 90% Identity
- iTF_00271041;
- 80% Identity
- -