Cfla007798.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- ttk
- Assembly
- GCA_949152465.1
- Location
- OX424435.1:79081616-79083448[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-11 2.8e-08 34.4 0.0 4 40 355 392 352 397 0.92
Sequence Information
- Coding Sequence
- ATGGAAAATCAATGTTTTTGCTTGCGTTGGAATAACCACAACACGGTAGTTTTCAAGGTGGTGGAAGAACTTTTTCATAAAGAAGCTTTCACCGATTGCCGTTTTATTAGTGTGGATGGTGGCGAAATCCGATGTCACAAAATCATTCTAGCTGCCTGTTCGACTCactttaaagaaattttcttaaatacgACAAACGAATCTCCGGTAATCTTCCTGCCAGATACATCGGTTGCCGATTTACGAGCGATAATTGAATTCATGTATACCGGAGAAGTCAACATTAACCAAGATCAATTACCCGGATTGATAAGAATTGCAAcccttttaaaaattaagggTTTATCGCAAGAAGACCCGATGGATTTAACCAGTGAAACTAAGAGGGAAGAGCCCGAAGTTAATCAAACTTCCCCACGCAATGTTCCATCTTCGAGTTTGCCATCGGTTCATAGCAGCAGCAGTAGCGGTTCTCCTCCTCATTCTACCAGCGGATTAGCCTACAAAAACATTCATAATATTTACGACAGACAAGCACATGTAAAACGCGAATCGCAGATTGACTCTTCTTGGCCAGTTTCGAGTAATCCCTCTCCGTACCATTCTATACCGACATTTCCGCAAAGTTCTCCCAGCACCGATATTCCACTACGAAATCGTTACGAAAACAACTCGGATTTGCCTCCAATTAAGCGTAAAAGACGCTCCAGTTTTTCGACCAATAATAGAGACACTCCCATTTTGAGAACGGTACTTGGACAAAATCAGGAAAAAGAAGCATCGCCATCGTCGAATTTAATTTGCCATTCCAATAACTACAACAATGTGTATCCAAATGCAACGGAACGAGAATATTTAGaaaaggGAATTAAAAACGAACCTAACGAATCCGACCGATCTTACAATTCGAATTTGAGTAATACTGCCCGAGAAGAACCAAAATCAAAATCGACCACTCCGCTATCACCTCAATACCTGAACGATCTGCACAATTTCAATACCAATTCGATTAGTTATATTGCTCCACAAAAAACTCATCGTTATAAGCAATATACCTCCAGCAATTTACAGCAAGCAATCGAAGCAGTTCGTTGTGGAAAGATGAGTGCCTTAAAAGCTGCcactttttttaatataccaTCTCGCACGCTGTAcgacaaaattaagaaattaggTATAATTCGAGGAAGACCAAAACGTTCGCCCAATGGTAATAGCACCGTGGGCACCACTACAGCATTGCCTCGCCGTCGAAGTGGAACTAATTCACCGTCCGATGAACAATTATCCGAAGCAGAAGACATTAGCGTTAATAATCACGTTTCTTATATTAATCCCTTAAATTACCTACAGCAAAACAAATATGAACAGGATTGCGacgacaatgaaaatttaactaTAACTCATAAAGATGAACTTCCGCCAAACACTGCTGCTAATTATTACCTACATTACAATAAAATCGAAAATCCGGCCGTTTCTAGAAACGATCATCATTCGCCTTTGTTCAGAAACGAAAATCATTCACCAATATCTAGGAACAATCATTCTCCCCTTTCTGGTAGCGATCGTCACACCAGAATAGAAACGAACGATAATTATGGAAATGCTGACAACGATCAAGTCGAAGATTTATCGATGAAAAAAACGAGAGTAATAATGTCGCCCAAATCGCAAATGTCGAATAGCAtattaataaaagaagaaatgttgaaGGAAGCTATTCTGGAAGAAAGCAGACGAGAGGTAAGCGTTGAAGAAGTTAAATAG
- Protein Sequence
- MENQCFCLRWNNHNTVVFKVVEELFHKEAFTDCRFISVDGGEIRCHKIILAACSTHFKEIFLNTTNESPVIFLPDTSVADLRAIIEFMYTGEVNINQDQLPGLIRIATLLKIKGLSQEDPMDLTSETKREEPEVNQTSPRNVPSSSLPSVHSSSSSGSPPHSTSGLAYKNIHNIYDRQAHVKRESQIDSSWPVSSNPSPYHSIPTFPQSSPSTDIPLRNRYENNSDLPPIKRKRRSSFSTNNRDTPILRTVLGQNQEKEASPSSNLICHSNNYNNVYPNATEREYLEKGIKNEPNESDRSYNSNLSNTAREEPKSKSTTPLSPQYLNDLHNFNTNSISYIAPQKTHRYKQYTSSNLQQAIEAVRCGKMSALKAATFFNIPSRTLYDKIKKLGIIRGRPKRSPNGNSTVGTTTALPRRRSGTNSPSDEQLSEAEDISVNNHVSYINPLNYLQQNKYEQDCDDNENLTITHKDELPPNTAANYYLHYNKIENPAVSRNDHHSPLFRNENHSPISRNNHSPLSGSDRHTRIETNDNYGNADNDQVEDLSMKKTRVIMSPKSQMSNSILIKEEMLKEAILEESRREVSVEEVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00268741; iTF_00927882; iTF_00927483; iTF_00272933; iTF_00272419; iTF_01291941; iTF_01291440; iTF_01294033; iTF_01293555; iTF_00271469; iTF_00271025; iTF_00270067; iTF_00269694;
- 90% Identity
- iTF_01291941;
- 80% Identity
- iTF_00268741;