Basic Information

Gene Symbol
ct
Assembly
GCA_949152465.1
Location
OX424438.1:17724509-17737827[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.2e-27 7.3e-23 81.5 0.0 3 72 323 393 321 398 0.94
2 3 3.9e-32 3.1e-28 98.7 0.0 2 76 700 775 699 778 0.96
3 3 1.3e-30 1.1e-26 93.8 0.0 3 77 923 998 921 1000 0.96

Sequence Information

Coding Sequence
ATGAGGATTCCGATAGCACCGACGTGGTGTGTTTCGAAAGAGCAGATAAGTCAACTATTAGAAGAAGTACAACGCCTCCAATTAAGTATTACGAAATTACAAGAAACTTCTATGTCGCAAATTTCACGACTAGAAGAAGAACTAGAACAGAAAAGGCAACTCACAAACAGATTAGAAGCAAAACTAGACGTTCAAAAGGATTACGATGAACTTCAACGGGAAATTAgTATACTGAGGTCAGTTAATTTTTCATCAAACAACCCTGAGAGTAAATCTGTAGAATTATTATTGGAGAGATCCAGGAGTGAAGCTTCCGAATCGACTGCTCCGGTTCAAGACAACGAAGGAGGTGCAAATCCATCATCAACACAACCTTCAGAGTCACCTTCAGGTCTTCCTAAATCGCCCTTAAACAATTCCCTTCCTCCGCTTTTTCAAAACGTCGAGACATTCGGCACAATACTCGGCGAAGAAATTGTTGCGACTTGGCGACGAAGCATCGAACAAATTACCTTAAATAACCGAATAATATCCTCCTCACCCTCTGCAGATGGACCTGTTAAAGCTACCACGCCGGTAGTGGCAGATTCTACAGAAAAGAGCACAGCATCGACGCCGCAACCAGTCGAATCGGTTTTTGGACCGCAGGCGTCTCCCGTCGAACCTCTCCTTAACGGCAACCCAAAAAGTCCCGAAGATAACAACAACCAACACCTCAGCAGCAACAACAACGTACCTTTGGCGGCCACCATGTGTGCCGTAAATAACTTCCTTAGAAATGAAGACTCGCTCAAGAGCCCGTACCGATTCGAAGAGCACAGATCGACGTTTCGGTTTTCAGACGAACTCGGATTGCCTCCGGGTTCGATGGTGGGCAGATTGGGCGAAAGTCTGATTCCGAAAGGCGATCCGATGGAAGCGAGACTACAGGAAATGTTACGGTACAACATGGACAAATATGCCGCACAAAACTTGGATACATTGCACATATCTCGACGGGTTCGAGAGCTTTTATCGATACACAACATCGGCCAAAGactttttgcaaaatatattttgggcttGTCGCAAGGAACCGTTTCCGAATTGCTATCCAAACCGAAACCTTGGGACAAGCTTACCGAAAAAGGTCGAGACAGTTACAGAAAAATGCACGCTTGGGCTTTGGATGAACACGCTGTCATGCTTCTAAAATCTCTTATACCAAAGAAAGGCAAAGAAACCGGCATTCCAAATTTTGGCCGTCCTGAAAATGAAATGACCGACGAAAGGATAGTGCATATCTTGAACGAAGCCTCCCACTTGCAAATGAAACCTCAACTCGAAGACAGCCGCAGTAACGACGATTCCAGATCGCCGCACGGTGGTTGCATCAGTCCGTTCTCGAGagaattacaaaaacaaaaattaaagaagtacGAAAACGACGACATCCCGCAAGAAAAAGTCGTAAAAATTTATCAAGAAGAACTCGCCAAATTAATGGGAAAACGCATCGAAGATTTTAGAAGAGAACCTTTTCCTGGTATGTTTTTTCCACACATATTTAGTGGGGGTCCTATGGACCGAACGCAAGAAGAGATTCGCATGGCGTTGGACGCTTACCATCGCGAGTTATCAAAATTAAACCACTGCCAAAATTCCGCACAAATGACAAATTTAGGCTTGCTGGCATTGCAGCAGCAAGCTCTCGCTCAACATCATAATCCTTCCATAAATGGTGGGGCGCAAGACTTATCGCTTCCGaaagaaaaatcgaaaatgGTTAACGGGATGGACGAGAAAGAAAAGGAATCGGATGATAGTATTAAACATTCTGGTAGTGCATTTAGTTTAGTTAGACCAAAAATAGAGCCCGGAACTCAATCCCAAACGACAAGTTCGACGGCATCTAGTCCATTAAGTAACAGTATTCTACCTCCCGCGATGACGCCGACTGACGAATTTTCCACATCTGCTACCGCCAGTCCACTACAACGAATGGCTTCCATTACAAATTCTTTAATTTCGCAACCACCCACTCATCAACATCATTCTACAAGTCAGCGACCGTTAAAAGCTGTCCTACCACCAATAACACAACAACAGTTCGACGTGTACAACAACCTAAACACTGAAGACATCGTCAAAAAAGTCAAAGAACAATTAAGTCAGTATTCAATAAGCCAAAGATTATTTGGTGAAAATGTTCTTGGTTTGTCCCAAGGATCAGTAAGCGACCTATTAGCACGACCTAAACCTTGGCACATGTTAACCCAGAAAGGAAGGGAGCCTTTCATACGCATGAAGATGTTTCTGGAAGACGACAGCGCAGTTCATAAATTGGTAGCTAGTCAATATAAAATTGCACCCGAAAAATTAATGCGAACCGGTGGCTACGGCGGAACACCGTGTGGCACGCCCCTAGGTACGCCTCTGAACAAACCTCTACCTCCGACCCAAAAAATGTTGAGCGAAGCCGCGGGTTTTCTGACTAAAATGCAAGAAAATCCCAATCTACTTCCGCCGTCGTTGCAAATGGTATCGGCCCAAAATCAAATGTTAAGTCAACCACACGGACCGCCGATGCTCCTCACGCCGCCCGGTATTCCACCACAACATCCCATTAATTTGCAAACGCCCGAACATATAAAGAAGCAAACTTCGAGTCCACACACAGTTCCACATGCAGTTCCACATTCGCCTTTATCGCATCACCAAAGTGCAAATTTAAGAAGTCTGAATCCGCACATTTCGCCGAGCGTGTACGAAATGGCGGCGTTAACGCAAGATTTAGACACTCAAGTGATAACAACCAAAATTAAAGAGGCTCTTCTTGCCAACAACATCGGACAAAAAATATTCGGCGAAGCGGTTTTGGGTTTATCGCAAGGTTCGGTTAGTGAATTGCTATCTAAACCCAAACCGTGGCACATGTTGAGCATAAAGGGTCGCGAACCGTTCATTCGAATGCAGTTGTGGTTAAACGACGCCCACAATGTCGAAAGACTGCAGGTATTGAAGAACGAACGTCGCGAGGCAAATAAAAGACGTCGCTCGACGGGCGCGGGCGCACACGACAACAGTTCGGATACTTCGTCAAACGATACCTCAGAATTTTATCATTCCAATTCGCCTGGTCCTGGACCCCCATCGGCCAAAAAACAAAGAGTTTTGTTTTCCGAAGAACAAAAGGAAGCTCTTAGACTGGCATTTGCACTTGATCCGTATCCAAACGTAGCAACTATTGAATTTTTGGCGGGAGAGCTCGGTCTCTCGAGTAGAACTATTACAAATTGGTTCCACAATCACAGAATGAGATTAAAACAACAAGCTCCTCACGGCATGCCCGCCGAAGTTCCTCCACGCGACCAAAGCGGAAATCAAGCACCTTTCGATCCCGTTCAATTTAGGCTGTTATTAAACCAAAGATTATTAGAATTATCGAAAGAACGAATGGGGTTGGGTGGAATGCCTTTACCTTATCCTCCATACTTATCAACCAATCCAAATTTAGCTGCTTTAATAAGAAATGTAGTGAAAGAACAAATGAGCGGTTTAGACTTATCGATGACTTCCTTGAAGAGAGAACCGGACGACTTCGAAGACGACGCGGAGAGTAACGTGGGATCGGAAGATTCGAACATGTCGGATAGTATGCACGGCGAAGTTAAGTCGGAACTGAACGAGAAACCTTTATCGCAAATCGGAAGTCAAGGTCGATCGTCTAGAAGAAAACCTGCTGCACCGCAGTGGGTGAATCCAGACTGGCAAGACGAAAAGGATACTAAGCAAGCGTCGGGTAGTGAAGTGATAATTAACGGCGTTTGCGTTATGCAGACGGAAGATTACGGAAGAAGAAATTCGGAAGAGACTGTTCATGTGGAGCCTACTCCGGTAATGGATAGGTTCGATGACGATCAGAGTGACGCGTCGTCGGTTAGTCACGAAAACGAGTTAAATGCGGAACAAAATGACGATAAAGAAAACGAAGACAATGTGAAAGAAACAAGTGAACGACAAAGTACAAGTGAAGATagtgaaaaatgtattaaacaaGAAAGCGACGATAGATGGGATTATTAA
Protein Sequence
MRIPIAPTWCVSKEQISQLLEEVQRLQLSITKLQETSMSQISRLEEELEQKRQLTNRLEAKLDVQKDYDELQREISILRSVNFSSNNPESKSVELLLERSRSEASESTAPVQDNEGGANPSSTQPSESPSGLPKSPLNNSLPPLFQNVETFGTILGEEIVATWRRSIEQITLNNRIISSSPSADGPVKATTPVVADSTEKSTASTPQPVESVFGPQASPVEPLLNGNPKSPEDNNNQHLSSNNNVPLAATMCAVNNFLRNEDSLKSPYRFEEHRSTFRFSDELGLPPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYAAQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWALDEHAVMLLKSLIPKKGKETGIPNFGRPENEMTDERIVHILNEASHLQMKPQLEDSRSNDDSRSPHGGCISPFSRELQKQKLKKYENDDIPQEKVVKIYQEELAKLMGKRIEDFRREPFPGMFFPHIFSGGPMDRTQEEIRMALDAYHRELSKLNHCQNSAQMTNLGLLALQQQALAQHHNPSINGGAQDLSLPKEKSKMVNGMDEKEKESDDSIKHSGSAFSLVRPKIEPGTQSQTTSSTASSPLSNSILPPAMTPTDEFSTSATASPLQRMASITNSLISQPPTHQHHSTSQRPLKAVLPPITQQQFDVYNNLNTEDIVKKVKEQLSQYSISQRLFGENVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDSAVHKLVASQYKIAPEKLMRTGGYGGTPCGTPLGTPLNKPLPPTQKMLSEAAGFLTKMQENPNLLPPSLQMVSAQNQMLSQPHGPPMLLTPPGIPPQHPINLQTPEHIKKQTSSPHTVPHAVPHSPLSHHQSANLRSLNPHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVERLQVLKNERREANKRRRSTGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQAPHGMPAEVPPRDQSGNQAPFDPVQFRLLLNQRLLELSKERMGLGGMPLPYPPYLSTNPNLAALIRNVVKEQMSGLDLSMTSLKREPDDFEDDAESNVGSEDSNMSDSMHGEVKSELNEKPLSQIGSQGRSSRRKPAAPQWVNPDWQDEKDTKQASGSEVIINGVCVMQTEDYGRRNSEETVHVEPTPVMDRFDDDQSDASSVSHENELNAEQNDDKENEDNVKETSERQSTSEDSEKCIKQESDDRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00950619;
90% Identity
iTF_00950619;
80% Identity
iTF_00268035;