Basic Information

Gene Symbol
kn
Assembly
GCA_949152465.1
Location
OX424436.1:18288227-18292240[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-129 1e-124 418.1 16.6 205 561 1 335 1 345 0.85

Sequence Information

Coding Sequence
ATGAGAAGATTTCAAGTTGTTATTGCTACTCAAGTGAGCGTCGAGGGACCACTATTGGCTATTTCCGATAACATGTTTGTGCATAATAATTCAAAGCATGGGAGAAGAGCAAAAAGGCTGGATCCCTCCGAAGgTTTATATCCTCCTCTACCCGTAGCAACCCCCTGTATCAAAGCCATCAGTCCAAGTGAAGGATGGACTTCGGGTGGATCTACCGTCATTATCGTCGGAGATAACTTCTTTGACGGATTACAAGTTGTATTTGGGACCATGTTAGTTTGGAGCgagTTAATAACGCCGCACGCGATACGAGTTCAAACACCTCCGAGACATATTCCTGGAGTAGTTGAAGTTACATTATCATATAAATCAAAGCAGTTCTGCAAAGGGGCACCGGGCAGATTTGTATATGTTTcACTAAATGAACCAACAATAGACTACGGATTTCAAAGATTACAAAAACTTATACCGAGGCATCCGGGCGATCCAGAAAAATTACCTAAAGAAATTATATTGAAAAGAGCAGCAGATCTAGCCGAAGCTTTATACACAATGCCCCGAAATAATCAGTTATCACTTACGGGGCCAAGATCGCCAACAATGGGAAACAATGGAATGACACCGACATTTAACACGTACACAGGGCAGTTATCAGTCAGCGTTCAGGACAGCGGAAACGGTCAGTGGACAGAAGAGGATTACGGAAGAACGCAAAGTAGCAGTGTGTCACCTAGAGGTGGTGGTTATTGCTCCAGCGCATCCACTCCTCACTCATCCAACGGTGGAGGATCCTACGTAGGCAACATGAATAGTTATGGCAATTCGACTCCAACAAGTAGTTCGCAATTATCTAACATGATTTCCGGCGCACCATCGCCAGGGATATTTAATTCTACTCCAAtttctCCGGAGTCGAGTCATTATCATTTTGGCGCACACAACCATAAACCGGACAAAGAGAAAAGCGCGTTCGCCCCGGTGATACGGGGAAACTCGACCTCCCCTGCTCACCCACCGGCACCCGCGCTTTTCCACCATCAGCCCGTCACTGGCTGGCACCACTTGGCTGTGCAAtgttag
Protein Sequence
MRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDPSEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLTGPRSPTMGNNGMTPTFNTYTGQLSVSVQDSGNGQWTEEDYGRTQSSSVSPRGGGYCSSASTPHSSNGGGSYVGNMNSYGNSTPTSSSQLSNMISGAPSPGIFNSTPISPESSHYHFGAHNHKPDKEKSAFAPVIRGNSTSPAHPPAPALFHHQPVTGWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00429627;
90% Identity
iTF_00464450;
80% Identity
iTF_00272246;