Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292477.1:5488176-5527221[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.5 3.8e+02 2.5 0.1 2 23 398 419 397 419 0.94

2 14 0.035 2.4 9.5 0.0 1 23 429 452 429 452 0.93

3 14 0.02 1.4 10.2 1.6 2 21 537 556 536 557 0.93

4 14 0.058 4 8.7 4.3 2 23 594 615 593 615 0.95

5 14 0.021 1.4 10.2 2.2 1 23 626 649 626 649 0.92

6 14 9.7e-05 0.0066 17.5 0.3 2 23 656 679 655 679 0.97

7 14 0.076 5.2 8.4 0.2 1 23 685 707 685 707 0.93

8 14 0.0094 0.64 11.2 1.8 1 23 713 735 713 735 0.98

9 14 0.12 7.9 7.8 0.0 1 23 881 903 881 903 0.97

10 14 2.2 1.5e+02 3.8 7.2 1 23 910 932 910 932 0.95

11 14 0.0015 0.1 13.7 1.8 1 23 959 982 959 982 0.95

12 14 0.0022 0.15 13.2 1.8 1 23 989 1012 989 1012 0.96

13 14 0.0042 0.28 12.4 0.2 2 23 1030 1052 1029 1052 0.96

14 14 0.00047 0.032 15.4 0.4 3 23 1089 1110 1087 1110 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.5	3.8e+02	2.5	0.1	2	23	398	419	397	419	0.94
2	14	0.035	2.4	9.5	0.0	1	23	429	452	429	452	0.93
3	14	0.02	1.4	10.2	1.6	2	21	537	556	536	557	0.93
4	14	0.058	4	8.7	4.3	2	23	594	615	593	615	0.95
5	14	0.021	1.4	10.2	2.2	1	23	626	649	626	649	0.92
6	14	9.7e-05	0.0066	17.5	0.3	2	23	656	679	655	679	0.97
7	14	0.076	5.2	8.4	0.2	1	23	685	707	685	707	0.93
8	14	0.0094	0.64	11.2	1.8	1	23	713	735	713	735	0.98
9	14	0.12	7.9	7.8	0.0	1	23	881	903	881	903	0.97
10	14	2.2	1.5e+02	3.8	7.2	1	23	910	932	910	932	0.95
11	14	0.0015	0.1	13.7	1.8	1	23	959	982	959	982	0.95
12	14	0.0022	0.15	13.2	1.8	1	23	989	1012	989	1012	0.96
13	14	0.0042	0.28	12.4	0.2	2	23	1030	1052	1029	1052	0.96
14	14	0.00047	0.032	15.4	0.4	3	23	1089	1110	1087	1110	0.95

Sequence Information

Coding Sequence: ATGACCGAAAACGTCTACCAATTCCTCATTAACTTGGAGCTGAACGACCCTGACATGTTCCAAACCTACGAACATCCTTCGGCCACTAACGACCAACCGTTGAGCCTCGATGATGATCAATTGTACGTTTTAGATGACGGAACACAGATTAGAGCCTCTCAGATACATTTTGACAACGAAGACGCTCCTTTAGATCTGTCGCTTGAACAACTCCCGTTTGTCAAAGTAAATAATGAGGAAGAAACTGTACCAAGTGGTGTATACGAAGATAAAACTCATAAGATAATAGCTAGCCCTGTACCTATAACAGATTCTAGTCCTAAACACGGTTTTATAAACCACGTACCTTTTAAACTTGTCTGCAATAACACCATCGGCTTTGAAGCTCAGTTCACTAAATATCTTGAGGCTAGTAACAAAACTTACGCGATGCTAAGCAATGTAACAAAAAAGAATAAATCTCCTCGTAGTTTGATACGAGATAACTTCAATGACAAAGAAGAATTTAGGTACACCCGTGAAGAGATATTAAATATGCTCAAAGATTCACCAGTTACTAGTATTCCGTACGAGAATAATGAGAAAAAGCACGTTAGGAAGACAGATCCTACTAAAATGGTTCAGAAGACTAGTACAAAAGCGATAGATATAGAAGGCTTAGTTATAGGTGATGGGGGAAATAAAAGCTGTTTTATATGCGGCAAAACTGTAAGCAAGgataagatatatctatttGATAAAGAAGATCAAAAGATACACAAATGTTCGCCGCAGAAGAAAATGTCGACTCAGCTGAAAATAATATGTGACGATTGCTTGAACGACAATTTTAAATCGTCGCGAATGAAAGGCGCAAATCAATTTCTTAACTCAGACGAGTATTTGGTCATACGGAATAATCAGCAATACATATTTCAAAAGACGAAGAATTTCAAATTTCGAACCGAaaccatagacaagaaaatTAAGAAAGATGAGTTTGTGAAGTTCGAAATAGGTTCTGACGGGGAGATTGTTACTAAGCCGATAGATGATGACGTCATCTTAGTACATGATGGTAGAAAGGATAGTTCCAGTGATGTTGAGATTGTAGAAGCGGAAGTGGACAAGATCATAGACAATCTAGAAGAAGCGGATGAGGATGTCAAAGTTTTTCTAGGGAAATATGAAGGTGATGAAATCGATGAACTGAAATGCAGATTCTGCGAGTTAATATTTTCGGCTGTATCAGAAGTGATTGAACACGGAGAGACCCACAAACACGTGATGGAAGACGACGTGGTATTTCCGTGTCCTTTGTGCGATTATGGTTACGCCACTTTCCAATGGTTAAGAGGACATTTGTTAGCAGCCCATGACAAGAAAACCTCCAAAAGTACTCACTCAAGTAAAGatGCCGAGAACAATTCAGCAGAAGAAAATAATTCAGACTCAACTAAATCGTATTCTAAAaacATTCTGGATATGATAATAAAAACTGAAGTGAAGCAAGAAGCGATAAGCAGCGACGAAGAGATATGGATCGTGCAGACTGGCGATGACGAGTCACAACAGCTGAGCAAATTGTTAGAAGCTGCTAAACTTGACAGTCATGAAGATCGAAGCAAGAAATGTCATAACTGCAGCATCACCTTCCCATCATCAGAGGCACTAGCCGCCCACAAGTGCCGCGGGAAGAAACGAAGGTCTGATGATGAGACTGTCTTCATTCCCACTCAGGAGGACTTCATCAGGAGGCAACGTAAGAAGTTGAAAGACCCGTCAGAGCCGCAGATAGTCACCTGTCATAACTGCAACCAGTCGTTTACTTCCAAAGTGAGACTGAAATTCCACATGCAATTTCACGAAAACACCTCAATGAAGACGGATGGGCAATACAAATGCACGCAATGCGGCGACACCTTTCCTACTGAGACGCAACTGTTCGATCACGTTCACTTTACACACGAGAAGATCAGGCGATGGCAGTGCCCAGTAGCAAACTGCGGAAAGACCTTCTACCTGAGGGCAACGCTGACGAAACACAGTCGCACGCACACAGACACGCGGCGGTATGTTTGTGTGACGTGCGGGAAACGCTTCCTCGACAAACAGACGCTCGACGAGCACGGAGTCACACATTtacagATAAAGCCCTACCAATGCCACATCTGCCTGAAGCAGCTGACGCGCGTCTCCCGCCTGAGGATGCACGTGCGCGCGCACGAGGAGGAGCTGGCTCCGACACTACTCCTGGTCTGTGTGGTCTGCTGCAGAGCATTCAGAGACTCACAGGAGGCACAGTCTTTCGCCACCACGGCTGTTGCAATCATCAATCACGAGGAGGAGCTGGCTCCGACACTACTGCTGGTCTGTGTGGTCTGCTGCAGAGCATTCAGAGACGGAAGGGAGGCACAGGAGCATGCAACGAAATCTACAGAATGTATAGAAGCAATAGCAGAAGTGAAGACGGAGGAAGAAGCCGCTGTGCAACTGTCGCCCACCAGTGGGATTGTGCGACAGACTATACAAGTTATAGAGTGCCCCTCCCCAAAACCCAAAGTGCCCCGTCAAGTGACGTCACCGGTGGCAGCGCCATTGTTGTCAAAGTTGACAGAAGATGCTTTACCACTGATAAGAGTTGTGGAGATTGAGAAGGCGTTCCGTTGTGAATACTGTGAAGATGTATTCTATATAGAGGATGGACTGAACGCTCATCGAGCTATACACAAGGGCGTCAAAAATCCCTTCACATGTCACATTTGCAAAGTCAGCTTTGCAACTTATTCCAgaTGCACCACACATAAAACCACTCATGGGTTCTACAAGCGCCCCGCCGCGGGCAATGATGCGTCGAGTGTTGTGGGATATAGGGACTTTCCTACTGTCAAACATTTTCTATGCGAGGATTGTGGACGGTCTTACCTCCACTGGACGTATCTTCAAGTGCACAGAAGAATGAAACATCCAAACGAAAATTATCTGCATAGTTGCAATCAATGTGAAATGACATTTCCCAATAGTTGGAGCCTCGCCTATCATCGTAAGAAGCTTCATGTTAAATCAGCTGCTGATGAGACAAAGAATACTGTACAGAATTATAGGATACCCTGTAGGGACTGCGACGAGGTTCTGCCAAACAAAACTGCGCTCTATAAACACAGGAAGAAGGAGCATACTGGCGTGTCGATGCAGGATAGTGTTGCCAGCTCGGTTATGTGTCAAGGAGAAAGACTAGCATCTATCCGTAACAAGTTGTTACAATACGGCGTCCGCGCGTGGGCCTGCGCGCGCTGCCCGAAACGTTTCCGGATCCGGTCGGAACTGCGCGCGCATACACGGATCAAACATCCAGCGTTCATAGCTGTATTGGAGGTGCAGGGTAAAAATTTGAGTCCCGAGGAAGCACTGAACACAATATTGGTAAACAACATAAGCCGAGAGCGAGTGATTGAAATCAACGTTATGGCATTCGCTAAGAGCCTTCAAGATTTGAACGTTCAGCTTTTATTACAAGATGGCGTGGCGGTCAACAGAAATCCGATTCAGGAAATAAACGAATCTATGCTGTTGGAATAA
Protein Sequence: MTENVYQFLINLELNDPDMFQTYEHPSATNDQPLSLDDDQLYVLDDGTQIRASQIHFDNEDAPLDLSLEQLPFVKVNNEEETVPSGVYEDKTHKIIASPVPITDSSPKHGFINHVPFKLVCNNTIGFEAQFTKYLEASNKTYAMLSNVTKKNKSPRSLIRDNFNDKEEFRYTREEILNMLKDSPVTSIPYENNEKKHVRKTDPTKMVQKTSTKAIDIEGLVIGDGGNKSCFICGKTVSKDKIYLFDKEDQKIHKCSPQKKMSTQLKIICDDCLNDNFKSSRMKGANQFLNSDEYLVIRNNQQYIFQKTKNFKFRTETIDKKIKKDEFVKFEIGSDGEIVTKPIDDDVILVHDGRKDSSSDVEIVEAEVDKIIDNLEEADEDVKVFLGKYEGDEIDELKCRFCELIFSAVSEVIEHGETHKHVMEDDVVFPCPLCDYGYATFQWLRGHLLAAHDKKTSKSTHSSKDAENNSAEENNSDSTKSYSKNILDMIIKTEVKQEAISSDEEIWIVQTGDDESQQLSKLLEAAKLDSHEDRSKKCHNCSITFPSSEALAAHKCRGKKRRSDDETVFIPTQEDFIRRQRKKLKDPSEPQIVTCHNCNQSFTSKVRLKFHMQFHENTSMKTDGQYKCTQCGDTFPTETQLFDHVHFTHEKIRRWQCPVANCGKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPYQCHICLKQLTRVSRLRMHVRAHEEELAPTLLLVCVVCCRAFRDSQEAQSFATTAVAIINHEEELAPTLLLVCVVCCRAFRDGREAQEHATKSTECIEAIAEVKTEEEAAVQLSPTSGIVRQTIQVIECPSPKPKVPRQVTSPVAAPLLSKLTEDALPLIRVVEIEKAFRCEYCEDVFYIEDGLNAHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPAAGNDASSVVGYRDFPTVKHFLCEDCGRSYLHWTYLQVHRRMKHPNENYLHSCNQCEMTFPNSWSLAYHRKKLHVKSAADETKNTVQNYRIPCRDCDEVLPNKTALYKHRKKEHTGVSMQDSVASSVMCQGERLASIRNKLLQYGVRAWACARCPKRFRIRSELRAHTRIKHPAFIAVLEVQGKNLSPEEALNTILVNNISRERVIEINVMAFAKSLQDLNVQLLLQDGVAVNRNPIQEINESMLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00662575;
90% Identity: -
80% Identity: -