Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292474.1:8872173-8879389[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 4.7e-05 0.0032 18.5 1.7 1 23 315 338 315 338 0.97

2 10 0.33 22 6.4 5.1 2 23 346 367 346 367 0.96

3 10 9.7 6.6e+02 1.8 0.1 1 11 371 381 371 389 0.84

4 10 0.00029 0.02 16.0 4.4 2 23 399 420 398 420 0.97

5 10 0.00046 0.031 15.4 0.3 1 23 424 447 424 447 0.97

6 10 0.22 15 6.9 0.2 2 19 461 478 460 480 0.92

7 10 0.00096 0.065 14.4 2.8 3 23 514 535 512 535 0.94

8 10 0.0013 0.09 13.9 0.0 2 23 554 575 553 575 0.97

9 10 7.1e-05 0.0048 17.9 1.1 1 23 581 603 581 603 0.99

10 10 5.3e-06 0.00036 21.5 2.8 1 23 609 631 609 631 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	4.7e-05	0.0032	18.5	1.7	1	23	315	338	315	338	0.97
2	10	0.33	22	6.4	5.1	2	23	346	367	346	367	0.96
3	10	9.7	6.6e+02	1.8	0.1	1	11	371	381	371	389	0.84
4	10	0.00029	0.02	16.0	4.4	2	23	399	420	398	420	0.97
5	10	0.00046	0.031	15.4	0.3	1	23	424	447	424	447	0.97
6	10	0.22	15	6.9	0.2	2	19	461	478	460	480	0.92
7	10	0.00096	0.065	14.4	2.8	3	23	514	535	512	535	0.94
8	10	0.0013	0.09	13.9	0.0	2	23	554	575	553	575	0.97
9	10	7.1e-05	0.0048	17.9	1.1	1	23	581	603	581	603	0.99
10	10	5.3e-06	0.00036	21.5	2.8	1	23	609	631	609	631	0.98

Sequence Information

Coding Sequence: ATGTCTGAGGTCAAATTATGCCGGGTTTGTGTAAGAAAAGACGTAAAAATGTATGAACATGATCGGTTCCAATTAATGTTTTATTACAAAGAAATTACCGGCTCCAAAATATCAAGCAGGGATTGCTTCCCGAAATGGTTTTGCTTTGAATGTGCAGCCTTATTGCACAAATACCATGAGTTCAAGAAGAAGTGTCACCATGGCCAGAAAGTTTTCAAAAATCTTTTGGAATCAggacaaGCAAGCTTAGAAGACATCActaaaagaaacaaaatcaCATCAAAACCACACTTACAAATTCTATCAGTGTCACGAAATGTTAAGACATTCTCAGTAAAACAcagtaaaattaaaacacccattAAAAATAACTACAATAGTTTCACAGAAGTTTTCCTAGATGACCTCAAATCGGACGTTGAAACAGAGAAttcaaaaagaacaaacaaagaAGTGTTTAGAACTATGGAAAGTAATTCTAACGAAATGGAACAATCAgcaaatgatgatgattttaatgattttgatgattctaatgaTAGTGCACCACTTGTGATTACAGAAAATTATGTCAAAGATGAAACAAGTAATAGAGAACAAACAGTATTAAATATTGATAACAGCACTGAAACAGATTTTATAGGAACAAGCTTTGATACACAAAAAGCAAGCCATGATACACAAAATTCAAGCCATGATACACAAAATTCAAGCCATGATACACAAAAAGCAAGCTATGATACAAGAACAATAATAAAACCAACCCATCAAAATGAAACAACAGAAATTACCAATAAAATGAATCTAGACAACAAATTCCAAAGATCTGTGAAAAAGAAGTTTCTCGACGAGAATCATTggaataagatcactttgacaGATGAAGAAGCGACAAGGAGGTTCCAGGCCAAAGCTCTTGAACATAAGTATTTGACAGCTGATTATAAGTGCGTAGACTGCTATAGAACATTTTCACAGGAAGACATGATGAAGAGGCATATTAAGTTGAGACACTGTGAGTCACTAGGCCCCAACGAATGCCGTCACTGCCGAATGCGCTTCAAGTGGAAATCTCGCCTTCAGAAACATTTGAAGGAACACTACACTATCTACAAATGTTTGAGATGCGAGCTCTCATTTCCtgttgaAATTTCAGCGTTTCAACATGATTATTCCCATAATGGTGTAACTTGGACCTGCGCGCACTGTGGACAAGGGTTTAGacatagTTCAACATACTACACCCATCTACGTAAACACAAGAGTAAATATGTATGCACCCTGTGCGGTGTGTCTTTTGTCAGCGAATTCGGTTTGTTCATGCATAAGAGGGTCAAACATGTCATCAACGAGGATTCAAAAGAAGAGGTTTCAAATACCTACTGCAAAGTGTGCGATATCAAATTCGACACGCTGAAAGGATACGAAGACCATTTCGCTGAGTCAGCACTGCATGCTACTGAAGTAACAGAAGGGACCACGTGCCTTCCATTGAAGACCAGATGCAGCAAGAAACGGGTCCCACGAATATCCACCAACTGCACCTCTTGCGGGAAAACATTTTCCACGTACGCGGCGTTCAGCAAACACCACTTATCATCACATCCGTCGCTAGCGCTCCCCCGGCCGCGCCCCGACCGACCCGACGGACAGAGACAGGTCTGCGAGGTGTGCGGTCTCACTCTGGCGAGTGCGTGGTCTCTCGCGAACCATCTGAACACACATTCCCGCGACAAGCGCTACACCTGTAAGACCTGCGGAATGCAGCTCAGCTCCAGAAGTGTGCTGCAAAGACATCAACTGACGCACAGTCACGAGAGGAACTTCGTGTGTGATTTGTGTGAGAAGCGGTTCACCCATCGCTCCGGGCTGCGACTCCATCTCAAGACTCACGAGAAAGAACCCAGTCCCAATCGATCAAGAAGAAAGAAAGGAGAGTCACAGCATGTGATGGAGTATTTCAAGAGTTACGGCAATTTGGCCAATAGCTATAGATAA
Protein Sequence: MSEVKLCRVCVRKDVKMYEHDRFQLMFYYKEITGSKISSRDCFPKWFCFECAALLHKYHEFKKKCHHGQKVFKNLLESGQASLEDITKRNKITSKPHLQILSVSRNVKTFSVKHSKIKTPIKNNYNSFTEVFLDDLKSDVETENSKRTNKEVFRTMESNSNEMEQSANDDDFNDFDDSNDSAPLVITENYVKDETSNREQTVLNIDNSTETDFIGTSFDTQKASHDTQNSSHDTQNSSHDTQKASYDTRTIIKPTHQNETTEITNKMNLDNKFQRSVKKKFLDENHWNKITLTDEEATRRFQAKALEHKYLTADYKCVDCYRTFSQEDMMKRHIKLRHCESLGPNECRHCRMRFKWKSRLQKHLKEHYTIYKCLRCELSFPVEISAFQHDYSHNGVTWTCAHCGQGFRHSSTYYTHLRKHKSKYVCTLCGVSFVSEFGLFMHKRVKHVINEDSKEEVSNTYCKVCDIKFDTLKGYEDHFAESALHATEVTEGTTCLPLKTRCSKKRVPRISTNCTSCGKTFSTYAAFSKHHLSSHPSLALPRPRPDRPDGQRQVCEVCGLTLASAWSLANHLNTHSRDKRYTCKTCGMQLSSRSVLQRHQLTHSHERNFVCDLCEKRFTHRSGLRLHLKTHEKEPSPNRSRRKKGESQHVMEYFKSYGNLANSYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01528602;
90% Identity: -
80% Identity: -