Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292478.1:6257238-6262753[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.011 0.75 11.0 0.1 3 23 223 244 221 244 0.94

2 10 0.0018 0.12 13.5 0.8 2 23 270 292 269 292 0.95

3 10 0.035 2.4 9.4 1.6 2 23 316 337 315 337 0.95

4 10 9.9e-05 0.0067 17.5 3.7 2 23 342 363 341 363 0.97

5 10 0.041 2.8 9.2 2.2 1 13 368 380 368 381 0.93

6 10 3.3e-05 0.0023 19.0 1.6 3 23 401 422 399 422 0.96

7 10 6.6e-07 4.5e-05 24.3 1.3 1 23 429 452 429 452 0.98

8 10 0.0073 0.5 11.6 0.6 1 23 458 480 458 480 0.96

9 10 5.5e-07 3.7e-05 24.6 3.6 1 23 486 508 486 508 0.99

10 10 4.7e-05 0.0032 18.5 1.4 1 23 514 537 514 537 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.011	0.75	11.0	0.1	3	23	223	244	221	244	0.94
2	10	0.0018	0.12	13.5	0.8	2	23	270	292	269	292	0.95
3	10	0.035	2.4	9.4	1.6	2	23	316	337	315	337	0.95
4	10	9.9e-05	0.0067	17.5	3.7	2	23	342	363	341	363	0.97
5	10	0.041	2.8	9.2	2.2	1	13	368	380	368	381	0.93
6	10	3.3e-05	0.0023	19.0	1.6	3	23	401	422	399	422	0.96
7	10	6.6e-07	4.5e-05	24.3	1.3	1	23	429	452	429	452	0.98
8	10	0.0073	0.5	11.6	0.6	1	23	458	480	458	480	0.96
9	10	5.5e-07	3.7e-05	24.6	3.6	1	23	486	508	486	508	0.99
10	10	4.7e-05	0.0032	18.5	1.4	1	23	514	537	514	537	0.97

Sequence Information

Coding Sequence: ATGTCTTCGCAGCCCCCGTGCCGGTGCTGCTTGACGCGGCCTCCCGATAAGAATCTGAAGTCCAAATACACAGTTTTCGGGAAGACAGAAATCTACGCCGATATGCTGAAGGAATGCTTTGAAATACatATATGCAATGGTGACGATGAGACCGGCATCTGTGAGATATGCGTGGCTCGGCTCCGAGACGCCACAGACTTCAAGAAACAAGTACAGCAATGTCAGAAGGAATTTAAGAAGCTGCCGGAGTCTTGTGTTAaagATGAGGCGAAACCAACTATCAAAGAAGAAGTCACTGATTATGATGAGGACAACGAAGGCTATTTTCTGGATCTAAAGTCTGAGCTAGCGGACTACTCAGACATTCACGATGATGATGACGACAAGAAGCTGGCGGAGTTACTCGCTACCACCATCAAACGGAAGGACAAGAAGAGGAAATTAAGGGACATTGACAAGAAGACTGATAAGAAACTAAAGAAGAAAACCAAACCTTTGAAGATATCAATCCACGCGCTCGCCAACCTCGACCAGATCATCAAACCGGTGAAAACCATCAATGTCCTCCGAGTCACCGAGAACCTCAAACACAAAACCAACATCGAGAACCTCATCAAATACTCAAACTGCACACCGTTCTCAAACAAAACCCTCTCCGGAATCATCTGTGCTTACTGCAAAGAGACTTACATGAACACACAAGATTTAAGAAGTCATATCGACGTTGCACACAAAAATGCAGACATAACCGACCATAAGAAAATGGATAGAAACAATTTAGCCTACAAAATAGACATAACGGATCTCAAATGCAACGTTTGCCAAGCAAAATTCGACTTTATAACTAACCTCAAAAAACATCTAATGAACGAGCACGATGTGAAATTCTATCCGGACGTCAACGATTATATCCTAGAATTTAAATTAAGCTCGGATGATATTTTGAATTGTGCGTTGTGTCATTCTACGTTTGAAACTTTTAAGATGCTATTGCAACATATGAACGGACATTACAGAAACTGTGTCTGTGAGATTTGTGATCTCGGATTCATAAATAAACATAGATTGAGGAACCATCAACGTACACATGATGTCGGGAGCTTTAAATGTACGTTCTGCGATAAAGTCTTCACTACCCGAGTTAGAAAAATGTGCCATGAAAAATATACACATAATAGTAATGCTAGGTACACAACAAACTGCCCTCAATGTGATAAATCATTCAATAGTTACtaccaaagaaatagacatatgTATACCGAACACAACACCGTAGCCGCTAGCTATCGTTGCAATATCTGCGATAAGTCCTTCATATTAAAGTCTAAATTAACTTCACATATTAAAAAGGTGCATTTAATGGAACGCAATCATATATGCTCGGTCTGCGGACAAGGTTTTTTCATTAAGCAGTCTTTAGACGAGCATATGATTAAGCATAACGGTGAACGAGTCTACCAATGCACCGTTTGCCATAAGTCTTATGCGAGGAAGAAAACCTTAAGAGAGCATATGAGAATTCATAATAATGATAGGAGGTTTAAGTGTGGGATTTGTGGTCTGGCATTCGTTCAGAAGTGTAGTATGAAAAGTCATATGTTGTCGAATCATGGGATTACTTTAGCCGAGTATGAGTTGAAGGTGGATATTACTAAACCGAGTGACAATGTAGATTTGGTTAGATAA
Protein Sequence: MSSQPPCRCCLTRPPDKNLKSKYTVFGKTEIYADMLKECFEIHICNGDDETGICEICVARLRDATDFKKQVQQCQKEFKKLPESCVKDEAKPTIKEEVTDYDEDNEGYFLDLKSELADYSDIHDDDDDKKLAELLATTIKRKDKKRKLRDIDKKTDKKLKKKTKPLKISIHALANLDQIIKPVKTINVLRVTENLKHKTNIENLIKYSNCTPFSNKTLSGIICAYCKETYMNTQDLRSHIDVAHKNADITDHKKMDRNNLAYKIDITDLKCNVCQAKFDFITNLKKHLMNEHDVKFYPDVNDYILEFKLSSDDILNCALCHSTFETFKMLLQHMNGHYRNCVCEICDLGFINKHRLRNHQRTHDVGSFKCTFCDKVFTTRVRKMCHEKYTHNSNARYTTNCPQCDKSFNSYYQRNRHMYTEHNTVAASYRCNICDKSFILKSKLTSHIKKVHLMERNHICSVCGQGFFIKQSLDEHMIKHNGERVYQCTVCHKSYARKKTLREHMRIHNNDRRFKCGICGLAFVQKCSMKSHMLSNHGITLAEYELKVDITKPSDNVDLVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00737733;
90% Identity: iTF_01528583; iTF_01529500; iTF_00662496; iTF_00661625;
80% Identity: -