Cbil025348.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- ZFAT
- Assembly
- GCA_958496255.1
- Location
- OY292478.1:6159411-6164214[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00032 0.022 15.8 0.1 1 23 70 93 70 93 0.96 2 17 0.3 21 6.5 0.3 2 23 120 142 119 142 0.94 3 17 0.002 0.14 13.3 0.5 1 22 163 184 163 184 0.96 4 17 0.32 22 6.4 0.1 1 23 189 211 189 211 0.82 5 17 0.15 10 7.4 1.6 1 23 216 239 216 239 0.96 6 17 0.45 31 6.0 0.6 1 23 246 269 246 269 0.91 7 17 0.0005 0.034 15.2 1.0 2 23 277 299 276 299 0.95 8 17 0.013 0.87 10.8 0.1 1 23 377 400 377 400 0.93 9 17 0.28 19 6.6 0.1 2 23 427 449 426 449 0.93 10 17 0.00037 0.025 15.7 0.3 2 23 472 493 471 493 0.97 11 17 9.7e-06 0.00066 20.6 0.0 1 23 497 519 497 519 0.99 12 17 0.00042 0.029 15.5 2.3 1 23 524 547 524 547 0.96 13 17 0.29 20 6.6 0.5 2 23 554 576 553 576 0.86 14 17 0.0026 0.18 13.0 2.6 2 23 584 606 584 606 0.97 15 17 1.1e-05 0.00078 20.4 1.4 1 23 612 634 612 634 0.97 16 17 1.8e-06 0.00013 22.9 1.9 1 23 640 662 640 662 0.99 17 17 0.00023 0.016 16.3 5.1 1 23 668 691 668 691 0.97
Sequence Information
- Coding Sequence
- ATGAAAACGGAGCTCAAAGTAGCAAAAACTGAAATCAAAACAGTGAAAGAGAGTCTACTAAATCAAAGAAGTAAATCAAAAACTCCATTAAATTATATCGAGCCCATTGCTGCAAAATTGGAGTTGGAAAAGCATAGATATAATATCCGAACTATACTTCAAAATTCCAATGCGACTCCTATCCGCGTACATAACCTCGGAAGTGGGTATGTCTGCAGCTTCTGCAATGCCTCTTTTGTCAAAGCCGCTGATCTCAAAAACCACACTATTGTAGACcatgacaataaaattaaaagcaaGTTCAAACCCGGAGGAAGTCTCTCCAATTTCGTGGTTAAACTAGATATTACATCACTATGCTGCAACATTTGCAACTTTGCCCCCACCACCCTGGACCAGCTAGTTGAACACCTCAACAGCGTTCATGCGAAAAAACTCCACACGGACATCAAAAATTATATCGTCAGCTTCAAATTAGACGAAGCGTTCAAATGCCATATTTGCTCAGCAGATTTCAACAGTTTCCGGGCCTTACTAGCGCATATGAACAAATACTTCCCAAACTTTATATGCGATGTCTGCGGCGCAGTGTTCGTTAACGGACACCAAGCCTACATCCATTCAGACATTCATCGAAACGGCTCATTCAAATGCAACTCTTGCGAAAAAGTCCTCAGGTCAGAAGCAAAACGCAAATCTCACGAGCGTCAAACACATATAGCTCTATCAGGACAATACAGATGCTTTTATTGCGGAGATCTGTTCCAAAATCCAAATATGAAGAAAAAACACATGGTAGCAGTACATGGCGCGAAGTACGCGGACTTGATATGCAACGCCtgtgataaaacttttaagagcaCCAAAGCTCTACAggatcacaaaaaaaaagatcatTCGATGATAAGATGGCTTTgTAAAGTGAAAATCAAACAGGAGGTCATAAATGAGATTAAAGAGGAAACAGACGGAGTTTCACGTAAAAAACAAAGGGGAATCAAATTAGTACAGTATCTCCATGATACAAAGGCACCTAACAGTCTTACATATAAAAGACTACAACAAAATCTGAGGCAGATCATTAAACATTCGAACGCCACACCGATTAGACGTGtcaacgatttagattacgtctgTGCGTATTGCGAGTACCAGACTCCTAACCCGGCCGAACTAAAAAGccacacaatagaaaatcacaGTAAAGAAACCGTTGTCACATCGACTAAGAAAATGTCTGCGAACAATTTACTAGTTAAATTAGACATTTCATCCCTGAGCTGCAAGCTTTGCAATCAGAATTTAGATAACTTGGAGGCACTTCTTGAGCATCTGCAGGCCATACACAGCGAAAAGATTCATACGGACGTCCAAAACCAAATCTTGCCTTTCAAATTCGGAGACGGTCCTCTCACTTGCTTTATTTGTGACGTTTCCTTCCCCACTTTTAAGATGTTAAACGTGCATGTGAATACACACTACAGACACTACGTATGCGACATTTGTGATTTTGGCTTCGTGAATCCGAACAAACTCGCGGCGCACATGCTTACACATAAAACTGGCACATTCGTGTGCACACATTGCTCCAAAGACTTTGCGACGAATGTAAAAATGAAGACGCATATAAAGCAAGTTCATGGGCCGAAATTGAGACTTAAATGCTGGCATTGTAACGAGAGATTTGCAGACCTTCTAGTGAAAGAGAAGCATATGACCGAAGCACACGGAATTATTTTCCCTACTCCGAAATGTGACTCGTGCGACAGAGTATTCATGCATCGCAGGGCGTTAAATTCTCACGTGAAGCGGATGCATTTGATGGATCGCCGGCACGAGTGCTCAGAATGTGACATGAAATTCTTCACGCCTGGTGAGCTGAAGAACCATATGTTGAAGCATACTGGTGCACGGCACTTCCAATGCCAAGTCTGTCTCAAACGTTACTCGAGGAAGAACAACCTAACTGAACATATGAGGATCCACGCAAACGATCGCAGATTCAAGTGTGAACATTGTGGAATGACGTTTGTGCAGAAGTGTAGCTGGAGAGGACATATGCGAAATAAGCATGGAGATACTGCTTAG
- Protein Sequence
- MKTELKVAKTEIKTVKESLLNQRSKSKTPLNYIEPIAAKLELEKHRYNIRTILQNSNATPIRVHNLGSGYVCSFCNASFVKAADLKNHTIVDHDNKIKSKFKPGGSLSNFVVKLDITSLCCNICNFAPTTLDQLVEHLNSVHAKKLHTDIKNYIVSFKLDEAFKCHICSADFNSFRALLAHMNKYFPNFICDVCGAVFVNGHQAYIHSDIHRNGSFKCNSCEKVLRSEAKRKSHERQTHIALSGQYRCFYCGDLFQNPNMKKKHMVAVHGAKYADLICNACDKTFKSTKALQDHKKKDHSMIRWLCKVKIKQEVINEIKEETDGVSRKKQRGIKLVQYLHDTKAPNSLTYKRLQQNLRQIIKHSNATPIRRVNDLDYVCAYCEYQTPNPAELKSHTIENHSKETVVTSTKKMSANNLLVKLDISSLSCKLCNQNLDNLEALLEHLQAIHSEKIHTDVQNQILPFKFGDGPLTCFICDVSFPTFKMLNVHVNTHYRHYVCDICDFGFVNPNKLAAHMLTHKTGTFVCTHCSKDFATNVKMKTHIKQVHGPKLRLKCWHCNERFADLLVKEKHMTEAHGIIFPTPKCDSCDRVFMHRRALNSHVKRMHLMDRRHECSECDMKFFTPGELKNHMLKHTGARHFQCQVCLKRYSRKNNLTEHMRIHANDRRFKCEHCGMTFVQKCSWRGHMRNKHGDTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -