Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292466.1:9586876-9590473[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.6e-07 2.5e-05 25.1 1.0 1 23 213 235 213 235 0.98

2 10 0.0062 0.42 11.8 1.6 3 22 243 262 241 263 0.89

3 10 1e-05 0.00071 20.5 0.6 1 23 267 290 267 290 0.95

4 10 1.9e-05 0.0013 19.7 6.4 1 23 299 321 299 321 0.97

5 10 1e-07 6.9e-06 26.9 1.1 1 23 327 349 327 349 0.98

6 10 1.4e-07 9.7e-06 26.4 1.2 1 23 355 377 355 377 0.98

7 10 8.8e-05 0.006 17.6 1.9 5 23 386 404 383 404 0.96

8 10 1.7e-06 0.00011 23.0 1.0 1 23 410 432 410 432 0.98

9 10 0.00053 0.036 15.2 6.4 1 23 440 462 440 462 0.98

10 10 7.3e-06 0.0005 21.0 0.7 1 23 468 490 468 490 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.6e-07	2.5e-05	25.1	1.0	1	23	213	235	213	235	0.98
2	10	0.0062	0.42	11.8	1.6	3	22	243	262	241	263	0.89
3	10	1e-05	0.00071	20.5	0.6	1	23	267	290	267	290	0.95
4	10	1.9e-05	0.0013	19.7	6.4	1	23	299	321	299	321	0.97
5	10	1e-07	6.9e-06	26.9	1.1	1	23	327	349	327	349	0.98
6	10	1.4e-07	9.7e-06	26.4	1.2	1	23	355	377	355	377	0.98
7	10	8.8e-05	0.006	17.6	1.9	5	23	386	404	383	404	0.96
8	10	1.7e-06	0.00011	23.0	1.0	1	23	410	432	410	432	0.98
9	10	0.00053	0.036	15.2	6.4	1	23	440	462	440	462	0.98
10	10	7.3e-06	0.0005	21.0	0.7	1	23	468	490	468	490	0.98

Sequence Information

Coding Sequence: ATGTCTACATTAACTGTATGTCGTATGTGCTTAGCACGTAATATTAAAATGCACGTAATTGCAAACACACCGCATCAAAACATATTTGAAAATTTTTCTGGTTTATTGTTGATCACAGAAGATGGAAAACCTGTTACAATATGCTACATTTGCTTTGCAATGTTGCGAAAATTCTCAAAATTGCAAGAAATATCAAGAAAAACAGATTTACTGCTCAAAGAAACCCTTTGTAAAGGGATTAAGATTGCTAAAGACAAAACTATGCATGGTGAAAATATTTACAACTTGGGTATATCTGCTACAAAATGTTTATCTATGCCTGAATCCATAAAAAATGAAAACCCAGAAATAAAAGAAGAAATATTAGGGGAGAGAATCTCAAATAAAATTCGTAATGAagatgaCTCTGTGACTGTAGTACCGAAAGATTATGATGTCACATTAAAAACCAGTTCACTAAAACAAGAACAAAATTCGCCAGAATTTGATGGAGACTTACTGAGCACCTGTTATTTATCAGCAATGAATGAAATTGAAACTGCTTCAAAATCTTGCAATGATACAAGATCTAAAAGAATTAAATTATGTACTACAAAATCCTTGAATATGGGTTCAACTGCTAATAGGAAAAAGTCATATGCATGTGATGTTTGCAACAAGTTATTCAAACAAAACGTTAATCTAAAAAGACATATTAAAACTCATACAGATACAAAATCACTTGCCTGTAAAAAGTGCTCAGAAACTTTTGAAAACAAATATGACTTCCAAGAACATAACACATTTCACACTGAAATGTACATGTGTGACTTGTGTGGTAACTCATTTTCATCTAAGTACAGCTTAAAAATTCACATCATTCAGAAACATAATGTGGGAGTTCAAACAAAGATACATAACTGTGATCGATGCAATAAGTCATTTAACCACAGAGGTACACTGAGGCTGCACATGAGAACTCATACTGGGGACAGACCCTATGCTTGTGAGAATTGCTCTAAAAGCTTCAGTCAGAAAGCGACTTTACTACGCCATATGAGAATGCACACAGGTGAGAAACCATATGCCTGCGACAAATGTACAAAAACATTTAACCAAGCAAGTAGTTTGAAACGACACATCAATATGCACACAGGGGACAAACCATATGTGTGTAAGTGTGGTAAAGCATATTATGAAAGTAGTCATCTTACACGACATCTTCGAACTCACACAGGTGAGAAACCCTATGCCTGCGACAGATGTTTTCAAACATTCGGCCAAAGCAGCAATCTTCAAGCGCACATGAGAAAACACACTGGAGAGAAAGCAACTAAGTACATCTGTCATGAATGTAATAAAACATTTGATCATAAAAGTATTTTCAAACGGCATTTACTGAAGCATACTCAAGAAAAGCCTTTTCCTTGCGATAGGTGCGACAAAAAGTATGCTGATAAAAGAACCTTACAACGTCATATTGTAACTCACAATTTGAACAACTGA
Protein Sequence: MSTLTVCRMCLARNIKMHVIANTPHQNIFENFSGLLLITEDGKPVTICYICFAMLRKFSKLQEISRKTDLLLKETLCKGIKIAKDKTMHGENIYNLGISATKCLSMPESIKNENPEIKEEILGERISNKIRNEDDSVTVVPKDYDVTLKTSSLKQEQNSPEFDGDLLSTCYLSAMNEIETASKSCNDTRSKRIKLCTTKSLNMGSTANRKKSYACDVCNKLFKQNVNLKRHIKTHTDTKSLACKKCSETFENKYDFQEHNTFHTEMYMCDLCGNSFSSKYSLKIHIIQKHNVGVQTKIHNCDRCNKSFNHRGTLRLHMRTHTGDRPYACENCSKSFSQKATLLRHMRMHTGEKPYACDKCTKTFNQASSLKRHINMHTGDKPYVCKCGKAYYESSHLTRHLRTHTGEKPYACDRCFQTFGQSSNLQAHMRKHTGEKATKYICHECNKTFDHKSIFKRHLLKHTQEKPFPCDRCDKKYADKRTLQRHIVTHNLNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00267786;
90% Identity: iTF_00267786;
80% Identity: iTF_00267786;