Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292450.1:739567-742050[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.6e-05 0.0011 19.9 2.2 1 23 134 157 134 157 0.98

2 12 0.0015 0.1 13.7 5.6 1 23 161 184 161 184 0.93

3 12 1.2e-06 8.5e-05 23.4 3.1 1 23 202 224 202 224 0.99

4 12 0.0014 0.098 13.8 0.2 2 23 230 252 230 252 0.93

5 12 6.8e-05 0.0046 18.0 3.5 1 23 258 280 258 280 0.97

6 12 0.00015 0.01 16.9 3.9 1 23 285 307 285 307 0.97

7 12 1.2e-06 8.3e-05 23.5 1.1 3 23 315 335 314 335 0.98

8 12 2.6e-08 1.8e-06 28.7 2.9 1 23 349 371 349 371 0.99

9 12 0.00011 0.0072 17.4 0.5 1 23 377 400 377 400 0.92

10 12 0.038 2.6 9.3 1.6 1 23 406 428 406 428 0.96

11 12 2.4e-05 0.0016 19.4 0.1 1 23 434 457 434 457 0.97

12 12 0.0011 0.075 14.2 2.3 1 23 466 489 466 489 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.6e-05	0.0011	19.9	2.2	1	23	134	157	134	157	0.98
2	12	0.0015	0.1	13.7	5.6	1	23	161	184	161	184	0.93
3	12	1.2e-06	8.5e-05	23.4	3.1	1	23	202	224	202	224	0.99
4	12	0.0014	0.098	13.8	0.2	2	23	230	252	230	252	0.93
5	12	6.8e-05	0.0046	18.0	3.5	1	23	258	280	258	280	0.97
6	12	0.00015	0.01	16.9	3.9	1	23	285	307	285	307	0.97
7	12	1.2e-06	8.3e-05	23.5	1.1	3	23	315	335	314	335	0.98
8	12	2.6e-08	1.8e-06	28.7	2.9	1	23	349	371	349	371	0.99
9	12	0.00011	0.0072	17.4	0.5	1	23	377	400	377	400	0.92
10	12	0.038	2.6	9.3	1.6	1	23	406	428	406	428	0.96
11	12	2.4e-05	0.0016	19.4	0.1	1	23	434	457	434	457	0.97
12	12	0.0011	0.075	14.2	2.3	1	23	466	489	466	489	0.96

Sequence Information

Coding Sequence: ATGTTTCCTTCTCTCTGCCGAGTGTGTTGTTGTTTGTCCAGCCACGTTAAAATAGATCTTAAGGAGACTATAGGGCTTCTACAAATATACGAAAAGTTCACTGATAACAAGGTGTCGGGTAAGACAGCTATTATGCTTAATCAAGGATTGAACCATCATTTATCGATATCAATCACAAATTTCGTATCTTTAAATGATACACATTTGGTATCTTCAAATGAATGTAAATATGAAGTTTCTCCTAAGGAAGAGTTTGACGCAGTTGAGTTTCCACACGATGATGATATTGAGAGAGTAAACATAGATGATACTGAATGCATGACCAATACCATACATGAAGATGTTAGCAAATCATCTGAAGTCATTGAAAGTaatagagaaaaagaaaaacagaAATTATACACATGTGACACATGCAGCGAAACATTTAGTAAGAAATCTCATATAGAAAAGCACATTAAGATTGTCCACAACATGCAATATGCTTGCAAAAGATGTCACTGTACATTCACTACCAGCTCCGATTTAAAAGACCATAATTCAAGAATCCACCCGAAAGAGCCTGATTCCACAAAAAACACATATCATATTAAACATAAGCCATATGAGTGCAAAATATGTAATAAAACATTCAGCTCTAAGCTATGGTTTAAGAAACATATAAAACGGCACTCAGAACCAAAACCGAGATGCACAGAATGTGACAGGAATTTCCCTAACGAAACTGCTTTAATACAGCATAATATTAGAATTCATAGTGGATTAAAGCCTTTTGCGTGCAGTCAATGCGACAAGAAATACTCTCACAATCGGTACTTAAAATATCACATGGAGATACATAGTGGAATATCTCATATATGTGACACTTGTGGCATGGCTTTCTCCCAAAGAAAAGGACTGCATCAGCATAGAAAGACGCACAACGCTGTAAAATCGAAAATATGCAGCATTTGCAGCAAAGCATTCCGAACAGTATCTCATCTTAAAGCACACATGATAACTCACACAGGCTTAAAACGTTACTCATGCAGCCAATCAAAACCTTACTCATGCAGCCAATGCGGCAAATCCTTTGGTACAAATCACAACTTAAGGGTCCATATGAGAACGCACACTGCAGAAAAACCGTTTGTCTGTGAACCTTGCAACAGAGCATTCACTCAAAAAACCAATCTGCAACGACACAACATCCGTGTACACTCCGGAGTTAAGCCACATATCTGTGACATCTGTCAGATGGCCTTCTCAGCAATGTGTATCTTAAGAATACATATGCGAACACACACTGGGGAAAAACCATATGTATGTGATGTGTGTAATCAAGCTTTCTCAGTTAAACCTAGCTTAAAGGAGCATATACAAAGGATGCACAGTGGTTTAAAGACTTTAAAGCCATTCGCATGTGGTGTGTGTGATGTTACATTCTCCACCAAATCAGGGCGTTATAAGCATGTTAGAAAATGCCATGAAGCTAAACCATGA
Protein Sequence: MFPSLCRVCCCLSSHVKIDLKETIGLLQIYEKFTDNKVSGKTAIMLNQGLNHHLSISITNFVSLNDTHLVSSNECKYEVSPKEEFDAVEFPHDDDIERVNIDDTECMTNTIHEDVSKSSEVIESNREKEKQKLYTCDTCSETFSKKSHIEKHIKIVHNMQYACKRCHCTFTTSSDLKDHNSRIHPKEPDSTKNTYHIKHKPYECKICNKTFSSKLWFKKHIKRHSEPKPRCTECDRNFPNETALIQHNIRIHSGLKPFACSQCDKKYSHNRYLKYHMEIHSGISHICDTCGMAFSQRKGLHQHRKTHNAVKSKICSICSKAFRTVSHLKAHMITHTGLKRYSCSQSKPYSCSQCGKSFGTNHNLRVHMRTHTAEKPFVCEPCNRAFTQKTNLQRHNIRVHSGVKPHICDICQMAFSAMCILRIHMRTHTGEKPYVCDVCNQAFSVKPSLKEHIQRMHSGLKTLKPFACGVCDVTFSTKSGRYKHVRKCHEAKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00267445;
90% Identity: -
80% Identity: -