Cbil019859.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- Zbtb41
- Assembly
- GCA_958496255.1
- Location
- OY292469.1:13544740-13547279[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0053 0.36 12.0 6.7 1 23 68 90 68 91 0.96 2 17 4.9e-07 3.3e-05 24.7 1.2 2 23 161 182 161 182 0.97 3 17 3e-05 0.0021 19.1 0.2 5 23 192 211 190 211 0.96 4 17 0.12 8.4 7.7 0.4 1 23 217 239 217 239 0.93 5 17 0.00064 0.043 14.9 0.8 1 23 245 267 245 267 0.98 6 17 0.00088 0.06 14.5 0.3 1 17 272 288 272 289 0.94 7 17 0.0031 0.21 12.8 0.6 1 23 392 414 392 414 0.98 8 17 0.00083 0.057 14.6 0.2 1 23 420 443 420 443 0.92 9 17 0.00033 0.023 15.8 0.7 3 23 451 471 450 471 0.97 10 17 5.7e-05 0.0039 18.2 0.3 1 23 477 499 477 499 0.98 11 17 0.01 0.69 11.1 0.1 1 23 505 527 505 527 0.96 12 17 7.4 5.1e+02 2.1 0.4 6 20 537 551 536 551 0.95 13 17 1.7e-05 0.0012 19.8 0.0 3 23 576 597 574 597 0.96 14 17 0.00022 0.015 16.4 1.4 1 23 603 625 603 625 0.94 15 17 0.01 0.7 11.1 0.2 3 23 633 653 632 653 0.97 16 17 0.024 1.7 9.9 0.0 6 23 662 679 661 679 0.96 17 17 0.0099 0.67 11.2 0.3 6 23 689 706 686 706 0.96
Sequence Information
- Coding Sequence
- ATGGAGCTAGTCTGTCAGGCGTGCCACTCGAAGACCTCCAGCGAGGAGTTTCACCAGCATCTGAGCTCAAACCATGAGGATCTGAAGAGTCAGGATGATATAGAGGCGTTCGTGAGAGAGCACGTCACGTTCGAGGAGACCCTCGATTCTGATGGAGATTGCACGTCGATAGGCTCGGCCGAAGCTTCTGTTTCACGGCGTTTCGAATGTTCCATCTGTCGCGCAGCATTCTCCACTCACTCGCGACTCTCCCACCACCTCAAAAAACATCACGCAAACGGTATGTTGTGTTGTGGCTCGAATGAAATCGAACAAGgtctgaaaatagggtcaagtAATTCAGCATGTAAAGGTTGCGATCACATCGCGGCAGATACGGCCGCACCGGCCGCTCACATCGCTCGGTGCGCCGCATCGACACACGAAATCGCGGGAGATGTGCCCATGAGAGACGAGACCAACCAGAAGAGGATCCCGGCCGTGTGCCCCGACTGCAACCGCACCTTCTCCAACAAATACAACATGCTGAACCACATGAAGAGTCACGGAAGACGGACTGAGAGATTCGACTGCGACTGTGGAAAGAGTTACTCCACTCGAGGGAACCTGGTGGCGCACAGACGAACTGCGCATCTGGGCGAGCTCGCCCACACGTGCGAGGAGTGCGGCGGAAAGTTCCCGACCCGCGCCGCTCGCGACGTGCACTCGCGGCTGCACACCGGCGCTCGGCCCTTCTCGTGCGACGTCTGCTCGCGCGCCTTCCGCGCCAAGAACTCGCTCGACAAGCATCGCGAGACGCACGCGCCGCGACGCTTCCCCTGCGCGCTCTGCGGCCGGACCTTCCGGAGGAGGGACCATCTCCGGTCCGCGGAGGGCTCGCCCGAGCGCGACTCGGACGCGAGCTCGGACCCCGCCCCGCTCGTCGGCCCCGCCTCGCTCGCCGCGCTGCGCCGCGCGCTCCGCCGCCTGCGCGACCACTACGTCGCGCACCACCTCCCCCCGCGCGCCCCGCCCGCATCCCCCGCACCCCCCGCCGGAGAGGACGCGGGGGAGGAGCGGGACCTCGACCGCTACGACGACCTGACGCGCGACAACATGCGGCGCGACCGCTTCGACCCGGAGACGCGGGTCGCGCTGGACGCGGCGCGCGTGCGCAGCGAGGGCCGCACGCTCTACGAGTGCGCGACGTGCGGCCGCCGCCTCGCCTCGCCGCACGCCTACGTGCACCACGCGCGCATCCACACCGGCGAGCGGCCGCACGTCTGCCACGTCTGCGGGGCGACCTTCCGCGCGCCGCAGGGGCTCGCGCGGCACCTCGCCGAGACGCAcgagcggcgccggcgccgcgcctgCCGCCTCTGCCGCGCGACCTTCGCCAACGAGCAGAACCTGCGCCAGCACCTGCGCACGCACACCGGCGAGCGGCCCTTCCGCTGCGCCGCCTGCGGACGCCGCTTCGCGCAGAGCGGCGCGCTGCACGCGCACGCGCGCACGCACTCCCCGCGCCGCCCGCACGCCTGCGCGCTCTGCCCGGCCGCCTTCCGCCTGCGCGCCGGCCTCGCGCGCCACGCCCGCCGCCACGCCGGCGCGCGCCCGCACCGCTGCGCCTGCGGCCGCGCCTTCCACGCGCGCCACGAGCTGCACGCGCACCTGCCGGACGACGCCGACCTAGACCCGCCGcccgccgcccccgcccccgccgcctCGGAGCGGCGCCGGTTCGGGTGCGCGACGTGCGGCCGCGTGTTCGCGGACCCGAGCAACCTCGCGCGGCACGCGCTCACGCTGCACGCGGGGCTGCGGCCTCACGCGTGCGGGGCGTGCGGGCGCGCCTTCAGCCGCGCGGAGCACCTGCATGCGCACGCGCGCCTGCACGCGGCCGCGGACCCGCTGCTGTGCGAGGCGTGCGGCGCGGCGTGCGCGTCGCCGGCGGCGCTGCGCTCGCACCGGCGGCGGCACGGCGCGGCGCGTCACGCGTGCGCGTGCGGCGCGCGGTTCCGACGCGCGGGCGAGCTGCGCGCGCACCGCGGCGTGCACGCGGCGGCGCGCCCGCACGGCTGCTGGTGCGGGCGCGCCTTCCGCCTGCGCGCGCAGCTCAACATGCACGCGCGGCGGCACCGGAACCGGCACGAGTACGGTCCGACCGACGCCGACATCGCGGGACCGTTCGCCGGAGACGGTGCGCCGGAGGGGTGGGCCGACGATCCCGCGCCCGCTCTTGGATGA
- Protein Sequence
- MELVCQACHSKTSSEEFHQHLSSNHEDLKSQDDIEAFVREHVTFEETLDSDGDCTSIGSAEASVSRRFECSICRAAFSTHSRLSHHLKKHHANGMLCCGSNEIEQGLKIGSSNSACKGCDHIAADTAAPAAHIARCAASTHEIAGDVPMRDETNQKRIPAVCPDCNRTFSNKYNMLNHMKSHGRRTERFDCDCGKSYSTRGNLVAHRRTAHLGELAHTCEECGGKFPTRAARDVHSRLHTGARPFSCDVCSRAFRAKNSLDKHRETHAPRRFPCALCGRTFRRRDHLRSAEGSPERDSDASSDPAPLVGPASLAALRRALRRLRDHYVAHHLPPRAPPASPAPPAGEDAGEERDLDRYDDLTRDNMRRDRFDPETRVALDAARVRSEGRTLYECATCGRRLASPHAYVHHARIHTGERPHVCHVCGATFRAPQGLARHLAETHERRRRRACRLCRATFANEQNLRQHLRTHTGERPFRCAACGRRFAQSGALHAHARTHSPRRPHACALCPAAFRLRAGLARHARRHAGARPHRCACGRAFHARHELHAHLPDDADLDPPPAAPAPAASERRRFGCATCGRVFADPSNLARHALTLHAGLRPHACGACGRAFSRAEHLHAHARLHAAADPLLCEACGAACASPAALRSHRRRHGAARHACACGARFRRAGELRAHRGVHAAARPHGCWCGRAFRLRAQLNMHARRHRNRHEYGPTDADIAGPFAGDGAPEGWADDPAPALG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -