Cbil000498.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- Zbtb41
- Assembly
- GCA_958496255.1
- Location
- OY292450.1:4309820-4335439[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.024 1.6 10.0 3.6 1 23 314 336 314 336 0.98 2 19 0.00083 0.057 14.6 0.5 1 23 342 365 342 365 0.96 3 19 6.4e-05 0.0044 18.1 3.1 1 23 369 391 369 391 0.99 4 19 0.0029 0.2 12.9 0.7 2 23 397 419 396 419 0.95 5 19 0.54 37 5.7 0.1 1 22 424 445 424 447 0.85 6 19 1.2e-06 8e-05 23.5 2.0 1 23 453 475 453 475 0.98 7 19 5.9e-07 4e-05 24.5 2.3 1 23 481 503 481 503 0.99 8 19 4.2e-05 0.0029 18.6 5.2 1 23 508 530 508 530 0.98 9 19 0.00041 0.028 15.5 0.1 1 23 536 559 536 559 0.96 10 19 0.0027 0.18 13.0 1.9 1 23 564 586 564 586 0.97 11 19 0.0023 0.16 13.2 0.1 1 23 593 615 593 615 0.98 12 19 6.4 4.4e+02 2.3 0.5 14 23 635 644 626 644 0.76 13 19 7.1e-05 0.0048 17.9 0.1 1 23 650 672 650 672 0.96 14 19 0.0024 0.17 13.1 8.0 3 23 680 700 678 700 0.98 15 19 0.001 0.068 14.3 3.3 1 23 706 728 706 728 0.99 16 19 0.082 5.6 8.3 0.4 1 23 734 756 734 756 0.96 17 19 9e-05 0.0061 17.6 1.8 1 23 762 784 762 784 0.97 18 19 0.0083 0.56 11.4 0.6 1 23 789 811 789 811 0.96 19 19 9.4 6.4e+02 1.8 0.5 1 22 844 865 844 867 0.75
Sequence Information
- Coding Sequence
- ATGTGCCGGGTGTGCCTATCGGCTGATGTAAAAATCTATTCGATTCGGGACACCCCGCTGCAAGTTATCTACGAAGGACTCACGAGATACAAGGTAGTTCAATCGGATGCTGCACTATGCAGGGTGTGTCTTGTTGGAGTCAAGACTTGTTCCATCGGAGGCACCACCCTACAAGCTGTATTTGAGAAGCTGACGAACACCAAGTTGCAGCTCCTCGTTCCGGGCAGAGCAGATACTTTGTGCTACATCTGCCGCTGTCAGCTACTGAAGTGTCAGAGACTCGTCAGCAAAGCTAAGAGATCGGAAAATATCCTGACGGAATTATTCCGTAATGGCATTCAGCTATCCCTGGAAACAGTGAGGGTCCTCACCAGTAGAGCCAAGTGTTACCTCGAGGTGGCCCCGACCGAGTCTGTGTCATACTTCGCGCCCGGACCAATCTGTACGGTCGACCTCAGCAGAAATAACTTGCTTTCTAAATCATACGCGCAAACTGAAGTTCAATCGGGTGCTGCACTATGCAGGGTGTGTCTTGTTGGAGTCAAGACTTGCTCCATCGGAGGCACCGCCCTGCAATCTGTCTTTGAGAAGCTGACAAACACCAAGCTCCTCGTTCCGGGCAGAGCAGATACTTTGTGCTACATCTGCCGCTGCCAGCTACTGAAGTGCCAGAGACTCATCAGCAAAGCTAAGAGATCGGAAAATATCCTGACAGAATTATTCCGTAATGGCATTCAGCTATCCCTGGAAACAGTGAGGGTCCTCACCAGTAGAGCCAAGTGTTACCTCGAGGTGGCCCCGACCGAGTCTGTATCATACTTCGCGCCCGGACCAATCTGTACGGTCGACCTCAGCAGAAATAACTTTCTTTCTAAATCATACGCGCAAACTGAAGATAAAGTGAAAAAAGAGTTTGATTACGAGAGTTCATATTTTCGGTTCAAATGCGGCGTTTGTGAATACAAATGTACAGGACTGGATCAATTCAAGAATCATTTAAAATATCACTCGTTGAGTCGACCCTTCGCTTGCGATTACTGCCCTAACAGATACACGACACGCGACCTTCTAAGAGTACACAAGCAAAGTGTACACAAAATAATCTATAAATGTCCAAAATGCCCCAAAAAGTgtagaaaaataagcagtttcAATGTACATATGAACATACACGCAGGGAAGAAGGTGAAGTGTGAACTTTGCAAGAAAATGTTACAAACTAACAAGAGTTTGTTAAAACACATAAGAGACGTACATGAAGATAATAAGTACCCGTGTGATCGGTGTGGTTCGTCATTCGCGACGGAGCTGCGGATGAAAGTACACGTTATAGATGCCCATGCTAAATTTCCGTACTACGTTTGCGATCGTTGCCGTAAGGAGTTCAAGGATAAATCTCTTTTAAGAAAACACATGAAAATCCACACTGATGAGCggaattataaatgtgaaatttgCGACAAATGTTTTAAATCGAAACCAAGTTTGATCCAACACTTAAAAGTACATACAGAGAAGGCTTTTGAATGTGATCATTGCCCCAGAAAATTTAGACACAAATCCCTATTGGCTACACATTTGAAATATCATCTGAATAAAATGGATTTTATCTGTGACGTATGCGCAAAAGGTTTCGTTACCAGAAACGCTTTAAAAAACCACACCAAAGTAGTACATACTAATGAGAGATATGAATGTAATGTGTGCAACGCAAAATTTCGTCAGAAAAACTTTTATAAGGAACATGTGCAGCAACATAAGActggatttgaaaaatacatGTGCAATGAATGTGGATTATTGTATCCACTGCAAGCCAAGTTGAGACAACACATGGCCAGACACAAGAAACCAAAACAACAGAGGAAGTTAGAAATATGTAGTGTATGTCAAATAGAAACTAAATCACTTAAAACTCATATGAAAATACACGAAAAATTAAAGCCATATGCTTGTGATATTTGCGGTAAAACATTCAAGTTAGCAGGTTATCTGTTGATACATCAAAGTGCGCACTCCGAACTCAGACTATTCGGCTGTGATCACTGCGGCAGATTTTTCAAGAAAAAACACTACTTACATCAACATATATCGACACATAGCTCGGCGAAGCCATATAAATGTGATGTATGTGACGCCGCTTACTCTCATCCGCTAAAATTAAACCATCATAAACGCAAACACAGACTGACTTTTGTGTTTCCGTGTGATATATGCGATGCAACCTTCGGCGAAAAACGCGGTCTACAATTCCACAAAAGATATCACACTAAACTAGTTCAGTTCATATGTGACTTATGCTACAAAGTGTACACAGACAAAACAGATTTAATACATCATTTGAAAAGTCACCGAAGAAATAAATTCAAATGTGAAGTCTGTAACAAATCGTTCGGggaaatgaagattttggcacAGCATATGAAACAACACATGTTGGAGAAGCTTGTCTGTCCGTTGTGTAAGGCTGTTTTGGGCAGAATTAAAATTAGGAGACATTACCAAAAGGAACATGGTGGTGTATATCCATATGCATGTAATATTTGCGAAAAAGGGTCCTATGTGATAGAAAAAGTGTACAATCATTATGTGATCCATCATAGCAAGGAAGATAGATATGTCTTTCAATCGGGTGCTGCACTATGCAGGGTGTGTCTTGTTGGAGTCAAGACTTGCTCCATCGAAGGCACCGCACTGCAATCTGTCTTTGAGAAGCTGACAAACACCAAGCTCCTCGTTCCGGGCAGACCAGATACTTTGTGCTACATCTGCCGCTGTCAGCTACTGAAGTGCTTGAGACTCGTCAGCAAAGCTAAGAGATCGGAAAATATCCTGACGGAATTATTCCGTAATGGCATTCAGCTGTCCCTGGAAACAGTGAGGGTCCTCACCAGTAAAGCCAAGTGTTACCTCGAGGTGGCCCCGACCGAGTCTGTGTCATACTTCGCGTCCGGACCACTCTGTACGGTCGACCTCAGCAGAAATAACTTGCTTTCTAAATCATACGCGCAAACTGAAGATGATATAAACTTAAGACATATTTATGATGAACACGTCAACACAGACATGACATGGCAAGAGTTTAGAGAAATGTGTTCAAGTATATGGGAAGAACCCTATAGTTATGTTGTGATTAATAAAGATTGTGAAAAAAACAATGGGTGTTACCGCAAAAAGTTTGATACGTTTGTTGTAtttaattag
- Protein Sequence
- MCRVCLSADVKIYSIRDTPLQVIYEGLTRYKVVQSDAALCRVCLVGVKTCSIGGTTLQAVFEKLTNTKLQLLVPGRADTLCYICRCQLLKCQRLVSKAKRSENILTELFRNGIQLSLETVRVLTSRAKCYLEVAPTESVSYFAPGPICTVDLSRNNLLSKSYAQTEVQSGAALCRVCLVGVKTCSIGGTALQSVFEKLTNTKLLVPGRADTLCYICRCQLLKCQRLISKAKRSENILTELFRNGIQLSLETVRVLTSRAKCYLEVAPTESVSYFAPGPICTVDLSRNNFLSKSYAQTEDKVKKEFDYESSYFRFKCGVCEYKCTGLDQFKNHLKYHSLSRPFACDYCPNRYTTRDLLRVHKQSVHKIIYKCPKCPKKCRKISSFNVHMNIHAGKKVKCELCKKMLQTNKSLLKHIRDVHEDNKYPCDRCGSSFATELRMKVHVIDAHAKFPYYVCDRCRKEFKDKSLLRKHMKIHTDERNYKCEICDKCFKSKPSLIQHLKVHTEKAFECDHCPRKFRHKSLLATHLKYHLNKMDFICDVCAKGFVTRNALKNHTKVVHTNERYECNVCNAKFRQKNFYKEHVQQHKTGFEKYMCNECGLLYPLQAKLRQHMARHKKPKQQRKLEICSVCQIETKSLKTHMKIHEKLKPYACDICGKTFKLAGYLLIHQSAHSELRLFGCDHCGRFFKKKHYLHQHISTHSSAKPYKCDVCDAAYSHPLKLNHHKRKHRLTFVFPCDICDATFGEKRGLQFHKRYHTKLVQFICDLCYKVYTDKTDLIHHLKSHRRNKFKCEVCNKSFGEMKILAQHMKQHMLEKLVCPLCKAVLGRIKIRRHYQKEHGGVYPYACNICEKGSYVIEKVYNHYVIHHSKEDRYVFQSGAALCRVCLVGVKTCSIEGTALQSVFEKLTNTKLLVPGRPDTLCYICRCQLLKCLRLVSKAKRSENILTELFRNGIQLSLETVRVLTSKAKCYLEVAPTESVSYFASGPLCTVDLSRNNLLSKSYAQTEDDINLRHIYDEHVNTDMTWQEFREMCSSIWEEPYSYVVINKDCEKNNGCYRKKFDTFVVFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -