Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292450.1:5999002-6002620[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0095 0.65 11.2 1.8 1 23 125 149 125 149 0.95

2 17 0.054 3.7 8.9 0.2 8 23 164 179 158 179 0.93

3 17 3.3e-05 0.0023 18.9 3.2 1 23 185 207 185 207 0.95

4 17 0.13 8.7 7.7 8.6 1 23 213 235 213 235 0.98

5 17 2.3e-05 0.0015 19.5 0.4 2 23 242 263 241 263 0.96

6 17 9.6e-06 0.00065 20.7 3.5 1 23 269 291 269 291 0.98

7 17 1.1e-05 0.00073 20.5 4.5 1 23 296 318 296 318 0.98

8 17 3.6e-05 0.0024 18.9 3.6 1 23 322 344 322 344 0.97

9 17 1.1e-05 0.00073 20.5 3.3 1 23 350 372 350 372 0.97

10 17 7.4e-06 0.00051 21.0 1.8 1 23 376 398 376 398 0.97

11 17 1e-05 0.00069 20.6 2.0 2 23 402 423 401 423 0.97

12 17 0.00093 0.064 14.4 2.5 1 21 429 449 429 450 0.93

13 17 0.00014 0.0097 17.0 4.6 1 23 465 487 465 487 0.98

14 17 6.3e-07 4.3e-05 24.4 2.7 1 23 493 515 493 515 0.98

15 17 4.2e-06 0.00029 21.8 3.4 1 23 520 542 520 542 0.96

16 17 0.00072 0.049 14.8 0.1 1 23 547 569 547 569 0.97

17 17 0.005 0.34 12.1 1.4 1 23 575 598 575 598 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0095	0.65	11.2	1.8	1	23	125	149	125	149	0.95
2	17	0.054	3.7	8.9	0.2	8	23	164	179	158	179	0.93
3	17	3.3e-05	0.0023	18.9	3.2	1	23	185	207	185	207	0.95
4	17	0.13	8.7	7.7	8.6	1	23	213	235	213	235	0.98
5	17	2.3e-05	0.0015	19.5	0.4	2	23	242	263	241	263	0.96
6	17	9.6e-06	0.00065	20.7	3.5	1	23	269	291	269	291	0.98
7	17	1.1e-05	0.00073	20.5	4.5	1	23	296	318	296	318	0.98
8	17	3.6e-05	0.0024	18.9	3.6	1	23	322	344	322	344	0.97
9	17	1.1e-05	0.00073	20.5	3.3	1	23	350	372	350	372	0.97
10	17	7.4e-06	0.00051	21.0	1.8	1	23	376	398	376	398	0.97
11	17	1e-05	0.00069	20.6	2.0	2	23	402	423	401	423	0.97
12	17	0.00093	0.064	14.4	2.5	1	21	429	449	429	450	0.93
13	17	0.00014	0.0097	17.0	4.6	1	23	465	487	465	487	0.98
14	17	6.3e-07	4.3e-05	24.4	2.7	1	23	493	515	493	515	0.98
15	17	4.2e-06	0.00029	21.8	3.4	1	23	520	542	520	542	0.96
16	17	0.00072	0.049	14.8	0.1	1	23	547	569	547	569	0.97
17	17	0.005	0.34	12.1	1.4	1	23	575	598	575	598	0.93

Sequence Information

Coding Sequence: ATGCCGACCACACTGTGCTGTCTGTGCTCGGCTCTCTTGCGCAGATTTAAGACATTAATAGAGATGGCCCACCAAGCCGAGGTACTTCTGACTGGTCTACTCAAGAAAGGCGCTGAGCTATCTGATACAGTAGCACAGTCCCCGCTAGTGCGCACACACCGACGAGCAGTGAGCGCGTTACACTGCGGCACACTGAAGACAGGCTTCGCGTTAAAGAAGGAGGGACACACACTAGTGGAAAATGTGCAAGAGTCTTATTCTTGGGGCGAAGCTCTGAAGACGGAGCCAGGCGAGGCCACTCGTGTCTCCGATACTCCCTCACGTACCGACGACTTGCCAGACACCAGTTGCACTAAACAGAGAACCATCAAATTCGCCTGCGACCAGTGGCAGTGCTCCCTAAAGTTTAAAACGGAAAAGTTATTAAAAACTCATAAGAAATctcataaaaataacaaaagtgataaaaatacctGTGAAAAGGGTTTGAAAATGTTCTCAACGAGCAATAATTTGAAGATTCACGCGAGATTACACTCGGGAGAACGGCCCTATAAGTGCAACGCGTGTCACAAAACCTTCCGTCGCAAGGACGAGCTGCTCAAGCATTCGGACATTCACTCACGTAAGCGATCACACGAGTGTCACGTGTGCCACGAAAAATTCCACAAGAAACTATCTTTAGATACTCATTTGAGGATACATAGCAAAAAACCGCTGCTGTCTTGCGACATATGTAGCAAAAAGTTTATTTACAAAAGCGCTTTAATAACTCACGCGAGATCTCACAGCGGCGATCGACCGTACAGATGTAAAGATTGTGATAAATCGTTCACATGCAAAAGCAATCTGAACATCCACGCGCTCACGCACTCACGTGACACGTTCACGTGTGGCGCCTGTCACAAAACCttcaaatacaaaagtagcttgCGGTTACATATACGACGCCACGGAGATACTTACATATGCCACAAATGTTCTCAAACCTTCACTTCTAAGAGTAGTTTAAATGAGCATGAGAAATTGCATATCAAGGAAAAGCAGTTCACTTGTGGATTATGCGATAAAAAGTTCTACCAGAAACATAACCTAGAAACACACTTAAAAGCTCACACAGAGGCGTTCGCGTGCGATAACTGCGACAAAACGTTCAAGAACAAAAACACGCTTCGACTGCATAGAGAGATGCACACAGGATTGAAGTGCGAATTGTGTGCGCGCGCGTTTAATAGGAAACATAATCTGCGCACGCACATGATGATCCATTCAGGCGTGAAGCCGCACGCTTGTAGCACCTGCGGAAAACGGTTCTACGAGAAATACAGACTGCGGAAACATCTCAAATCTTTCGCAAACAAGGAACACCGATACTCGCCGCCCTCACATGAATACACTTGCGATACCTGCAAGCACACGTTCAACAAACGACACAACCTAATCAATCATATAATCATCCATTCAGGAGAAAAACCGTTCGTTTGCGAGCGATGCGGGAAACGGTTCTCGCACAAAGCGAACCTTACAAAACACACAATCATGCACGAAGGGATACAACACGCCTGCGATAGATGCGACAAGAAATTCAGCTCTAAAAGTTACTTGAAAGTCCATTATAGGATACACACGGGTCAGTTGTTTCCCTGTGAGGTTTGTGCGCGTCAGTTTAAGCGAGGTGCAGACTTGCGTACGCATTTGCTTGTTCACACGGGGGAAAGACCACATGCTTGTCAAATATGCGCGCGAGCGTTTGCAAGGAAATGTAAGCTGACGTCTCATGTTGCTTCTGCGCACGCTACACCACCCTGA
Protein Sequence: MPTTLCCLCSALLRRFKTLIEMAHQAEVLLTGLLKKGAELSDTVAQSPLVRTHRRAVSALHCGTLKTGFALKKEGHTLVENVQESYSWGEALKTEPGEATRVSDTPSRTDDLPDTSCTKQRTIKFACDQWQCSLKFKTEKLLKTHKKSHKNNKSDKNTCEKGLKMFSTSNNLKIHARLHSGERPYKCNACHKTFRRKDELLKHSDIHSRKRSHECHVCHEKFHKKLSLDTHLRIHSKKPLLSCDICSKKFIYKSALITHARSHSGDRPYRCKDCDKSFTCKSNLNIHALTHSRDTFTCGACHKTFKYKSSLRLHIRRHGDTYICHKCSQTFTSKSSLNEHEKLHIKEKQFTCGLCDKKFYQKHNLETHLKAHTEAFACDNCDKTFKNKNTLRLHREMHTGLKCELCARAFNRKHNLRTHMMIHSGVKPHACSTCGKRFYEKYRLRKHLKSFANKEHRYSPPSHEYTCDTCKHTFNKRHNLINHIIIHSGEKPFVCERCGKRFSHKANLTKHTIMHEGIQHACDRCDKKFSSKSYLKVHYRIHTGQLFPCEVCARQFKRGADLRTHLLVHTGERPHACQICARAFARKCKLTSHVASAHATPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -