Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292472.1:2748806-2753210[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.3e-05 0.00088 20.2 0.4 3 23 187 207 185 207 0.97

2 16 5.4e-06 0.00037 21.4 3.6 1 23 213 235 213 235 0.99

3 16 1.3e-07 8.7e-06 26.6 1.3 2 23 242 263 241 263 0.96

4 16 6.2e-05 0.0042 18.1 2.0 1 23 269 291 269 291 0.96

5 16 3.7e-05 0.0026 18.8 1.1 2 23 297 319 296 319 0.94

6 16 0.00023 0.016 16.3 2.5 1 23 325 347 325 347 0.97

7 16 8.6e-08 5.9e-06 27.1 1.3 1 23 353 375 353 375 0.98

8 16 1.1e-06 7.7e-05 23.6 1.9 1 23 381 403 381 403 0.98

9 16 0.00038 0.026 15.6 1.9 1 23 408 430 408 430 0.97

10 16 1.1e-06 7.4e-05 23.6 1.6 1 23 440 462 440 462 0.98

11 16 2.7e-06 0.00018 22.4 3.8 1 23 468 490 468 490 0.98

12 16 1.4e-06 9.4e-05 23.3 0.2 1 23 496 518 496 518 0.98

13 16 2.1e-05 0.0014 19.6 0.5 1 23 524 546 524 546 0.98

14 16 0.0014 0.093 13.9 0.7 1 23 552 574 552 574 0.94

15 16 1.8e-06 0.00013 22.9 2.6 1 23 580 602 580 602 0.98

16 16 0.0002 0.013 16.5 0.2 1 20 608 627 608 629 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.3e-05	0.00088	20.2	0.4	3	23	187	207	185	207	0.97
2	16	5.4e-06	0.00037	21.4	3.6	1	23	213	235	213	235	0.99
3	16	1.3e-07	8.7e-06	26.6	1.3	2	23	242	263	241	263	0.96
4	16	6.2e-05	0.0042	18.1	2.0	1	23	269	291	269	291	0.96
5	16	3.7e-05	0.0026	18.8	1.1	2	23	297	319	296	319	0.94
6	16	0.00023	0.016	16.3	2.5	1	23	325	347	325	347	0.97
7	16	8.6e-08	5.9e-06	27.1	1.3	1	23	353	375	353	375	0.98
8	16	1.1e-06	7.7e-05	23.6	1.9	1	23	381	403	381	403	0.98
9	16	0.00038	0.026	15.6	1.9	1	23	408	430	408	430	0.97
10	16	1.1e-06	7.4e-05	23.6	1.6	1	23	440	462	440	462	0.98
11	16	2.7e-06	0.00018	22.4	3.8	1	23	468	490	468	490	0.98
12	16	1.4e-06	9.4e-05	23.3	0.2	1	23	496	518	496	518	0.98
13	16	2.1e-05	0.0014	19.6	0.5	1	23	524	546	524	546	0.98
14	16	0.0014	0.093	13.9	0.7	1	23	552	574	552	574	0.94
15	16	1.8e-06	0.00013	22.9	2.6	1	23	580	602	580	602	0.98
16	16	0.0002	0.013	16.5	0.2	1	20	608	627	608	629	0.92

Sequence Information

Coding Sequence: ATGAGTTCTGTACTTGTGTGCAGGGTGTGTTTACTTGACAATATTAGGATGGAATATATTCAAAGCTCTGCATTGAGAGAATTATTTGAGTTGTTGGCTGATAATAGGATTACACAAGAGGCTGTTAAACTATTGAACGGAGGTGTACCACTTGCTTCCTCTATACAAGTACAGCCTACTTCGTACCACTGCTATGAGTACAGTTTGACAGGAGTCAAGCAAGAGTTTGAGGATTATCCGATTGACTTTCATGATGATCTTTGTCATGATGATATCAagttggatgatgatgatgatttatctGCAGTTGATGAAGCTCCTGCTTCTAAAGAAATGAAAGATGAAAATCTAGAAGACCACGAAAAAGTTAATCAAATTTTTGTACAACCATGCGGCGCCGGCGTTAAAGAGGAACAAGCAAATATTGACAGTCTTACAAATGTAACTAAAATTagacacaaaaaaataattttatcaaagAAATCTAAAAATAGTATCAATGGAAAAACCTCAACAAAAAGGCATAAAAGCCGCCTCAAGCTAGAAAATCTGCTCGCCTGCAAGTATTGTAATAAAATCCTAGCAAACAAATATGACTTAAACAAACACATTCTCACTCACACTGGGGACAAACCATATTCGTGCACTATTTGCGAAAAGTCGTATTCAGACAAACATGTTCTAAAACGACACTTAAAAACTCACTCCGGCGTACGCCCCTGCGCTTGCAGCGTTTGCGGTAAATCATTCCCAGAAAAAAGCGACTTGAGAAAACACATGAGAATACATACCGGCgtaaagccatttgcctgtcaTCTATGTGATAGAAAATTCTACGAAAACTATCAATTACAAAACCATATAAACGGTCATAAAGGAGAAAAGTTGATCTGTCAGATGTGTGATAGAacattttcagaaaaaaatcaactgaaacGGCATGTTAGCAGAATGCATTCTGGGATCAAGCCATTTGCATGCGGATACTGTGATAAGAAATTTCACGAGAACAACAGATTGCAGAGACACATCAAAGTGCACACAGGGGAAAGACCTTACGCATGCAATGAATGTAAGAAAACGTTCTCCGATAAACGTAGCTTAATCGTCCACATGAGACGACACACAGGGGACAAGCCATTCTCGTGCGAAGTGTGCGGCAAGAAGTTTACATCAAACACCACTTTAAAAAATCACACCAAAATACACTCAGACAAAATCTTTGCCTGTGACCTTTGTGACAAAACTTTCACCGTCTTAGATTACCTAAAATGTCACATGAAAATCCACTCAGTAGAAAGAAGACCCGACTCCGCTTACGCATGCGAGCGGTGCGGCAAAACATATTTCGATAAGAGCGTGTTGAAAAAACACATGAGAACGCACACAGGGGAAAAACCATTTATCTGTGATATGTGTGAAAGGACCTTCACAGAGAAATGCAATTTAAAACGGCACATACGCACACATACAGAAGAGAAACCATACGCTTGCGATGTGTGTGACAAATCCTTTGCCGAAAGTGGAAACTTAAAGACGCACAAGAGAGTTCACACGGGAGAGAAGCCGTTCTCGTGTGACGCTTGCGGTAGAGGTTTCGCTCAGTCTAATTCGTTGAAGAAACATCTcacaactcacactggagaacgACAGTTCTCCTGCATCGTATGTTACAAAACTTTCACAGCTAAGAATAGTTTGACAGTTCATCTGAGAATTCATAGCGGCGAGAAGCCATTTTCTTGTGATATTTGCAACAAAACATTCTATGAAAGCAGCTCGTTGAGTCGGCATAAAAGGACTCATTCGGGAGATAATCCTTATATATGTATTGAATGTAATAAATCGTTTAGCAGAAAGGCTTATTTACAACAACACATTGCTTTTTGTAAACGGCATTAA
Protein Sequence: MSSVLVCRVCLLDNIRMEYIQSSALRELFELLADNRITQEAVKLLNGGVPLASSIQVQPTSYHCYEYSLTGVKQEFEDYPIDFHDDLCHDDIKLDDDDDLSAVDEAPASKEMKDENLEDHEKVNQIFVQPCGAGVKEEQANIDSLTNVTKIRHKKIILSKKSKNSINGKTSTKRHKSRLKLENLLACKYCNKILANKYDLNKHILTHTGDKPYSCTICEKSYSDKHVLKRHLKTHSGVRPCACSVCGKSFPEKSDLRKHMRIHTGVKPFACHLCDRKFYENYQLQNHINGHKGEKLICQMCDRTFSEKNQLKRHVSRMHSGIKPFACGYCDKKFHENNRLQRHIKVHTGERPYACNECKKTFSDKRSLIVHMRRHTGDKPFSCEVCGKKFTSNTTLKNHTKIHSDKIFACDLCDKTFTVLDYLKCHMKIHSVERRPDSAYACERCGKTYFDKSVLKKHMRTHTGEKPFICDMCERTFTEKCNLKRHIRTHTEEKPYACDVCDKSFAESGNLKTHKRVHTGEKPFSCDACGRGFAQSNSLKKHLTTHTGERQFSCIVCYKTFTAKNSLTVHLRIHSGEKPFSCDICNKTFYESSSLSRHKRTHSGDNPYICIECNKSFSRKAYLQQHIAFCKRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -