Basic Information

Gene Symbol
Trm1
Assembly
GCA_958496255.1
Location
OY292466.1:1989201-2011413[+]

Transcription Factor Domain

TF Family
NCU-G1
Domain
NCU-G1 domain
PFAM
PF15065
TF Group
Unclassified Structure
Description
NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-15 9.6e-11 41.9 0.6 2 86 564 643 563 691 0.79
2 2 1.4e-80 3.9e-76 257.0 0.0 66 353 783 1062 777 1062 0.93

Sequence Information

Coding Sequence
ATGGATGCATGTACAGATAAAATACCATGCAAAAAATACATAACAGAGGGTAAAGCTGTGATGAGTTTGTCGACAGACAAGGTATTTTACAACCCTGTTCAGGAATTCAACCGTGACCTGAGTATTGCAGTGTTGAATGTATTTACTGCTCAATTTAGAGAAGAAAAACTTGCTCAGGTGCAGTCAAAAGCAGAAAAAAGGCAGAAAGAGGGTAAAAATCCTAATCCAACAATTCTGACTGATGAAAATGATACTACTGAGGAATTAGTGACAATACTGGAACCTCTCTCTGCCACGGGGCTACGAGCCATCCGTTATGCTAAAGAGGTGGCGAATGTATCAAAGATCATTGCGAATGATTTATCTCGGAATGCCGTGGAAGTTATCAGGGAGAATATTGTATCTAATGGATTGGAGGGAAAAGTAGAACCAAATCATGATGATGCTtgCATGGTGATGTACAAGCACAAAGATAAGAAGAAGCGTTTCTCCGCTATCGACCTAGACCCATACGGCTGTCCGTCCATCTTCCTCGACGCGGCGGTCCAGGCTGTACAAGATGGCGGGTTGTTGTTGATAACGGCGACGGACATGGCGGTGTTGGCGGGAAACTCGCCGGAGACTTGTCACGCTAAGTACGGAGCTGTGAGCTTGAAGACTAAGGCTTGCCATGAAATGGCGCTTCGTATTCTGCTGCAGTGCATATCATCGCATGCGAGTCGCTACGGTCGGTACATAGTGCCGATGCTTAGCATATCCGCAGATTTCTACATCAGAGTGTTCGTCAAGGTTTACTCGGGGCAAGAACAAGTCAAGAAAACGTCGAGTAAGCTGTCCATGGTGTACCAATGCACGGGCTGTGGAACCATGTCGCTCCAGCCACTCGGCGGGTTCAAACCCAACCCTACAGAACGCAGACCTGAACAGATAAAGTCTTATCTGCCGACCGTGCCGCCGGTGGACAAGCATTGTGTGCATTGCAACTCTAGGCATCGGCTAGGAGGTCCAATCTGGTCGGCGTCTATCCACGACATACCCTTCGTATCATCCGTTCTCTCTCACGTGAGCGAATACCCACAGAACTTCGGCACTGCGAAGCGGATACAAGGCGTCTTGTCTATGGTTAAAGAGGAATTAGACGTGCCGCTTTACTATAGTATGGAGCAGCTGGTCGGAACGGCGCATGTTGAGACTATGAAGATGAATCTAATGAGATCAGCAATAATGAACGCCGGCTACCAAGTGTCGTATTCCCACGCGTGGAAGAACTCGGTCAAGACGGATGCGCCGGCGCACTTTGTGTGGGACATTATACGGAGCTGGGCGATACAACATCCCGTCAAACCTGAAAGATTGGAGTCAGATGCGATAGCGAAGCACCTTATGTCCCACGAGATAAAGCACACGATCGATTGGACGGTACGCAACGACGCCAACCCCGACAGCCGGAGGGAGCATTGTCTGCGGTTCCAAACCAACCCCACTAGGTACTGGGGGCCCGGCTGTAGGTCTGCTGTCAATGTCGGCGAATTGACAAACTCGAAGCGAATAGCTAAACAAGATACCCGAAGATACAAGAGGAAGCATTCTCCTACCACTTTAGACGAAGCTTGCAAGAAAGGCAACACTGATAGCGATATAACACCAATCCTAAATCCTGGGTGCAAAGACTGTACAGATGTGAATCCGCTCTTCTACATCAAAGCCGAGAGCACCCATGACACCATCCATCAGATATGGGACTTCACAAGGGGAGTGCCGACGGTGATATACCTGATTGCAAGCCCAAACTCCACTTTGAACATCACTTGGGAGAAATCAATACCGTCAGAATTTGAGCTGTCGGAGAAACCAAAATACAGTTTTGCAGTTGCTATAGACAAGAATATATCAAGACCGTTACAAAACCAACCTGCTCAAAATACAAGACAGAAGGAAACCGATACGGTCCACCTTAGACTCAATCCAGCCAGCAGTCCAGAGTGGCAGCACCACGAGGTGGACCCAGGAACCGTGCAACACAACCACCACCTCGTCGAGCAGCACCTAACCACAGCTACAGCCGCTCACGCCCCGAGAGGGCTGCACCACGTGGGCCACACAGCAGACGCTGAACAATCAGATCTGAAGTGGTGGTCTTCCATCATAAACCTTACTAACAAAAGTATATGTGGTCGACAGTACAAATTGGAAATATTTTCAGATGCATCTTTGACTGGATGGGGAATACACTGCGATGGCGAGAGTGACTGTACATCAATTGTGCAGCCACCTTACCCTGACGGCGAGCATCTTCTGCGGCAAGCATTCAGACGCCGAGGTTTGCTAGAAAGCTCACTAAACATCATGCTAGCTTATCTGAAGATCTACGAATACGACGATCTAGAGGACAGCGGCCACATCAGCCCGAAATGCCCGCAGCAGTACTTCTCACTACGTCATCTATCATGGCTACGTAACGAAAAAGTCACGACAGACAAAGAGGCGATGCTTATGGTTCACGCTCACTATAAAGATGGCAAGAGATCCGGAATCATCGATATAAAGctgGACCTCCTCCCGTTCAAAGACTACGCGACAACACTACCGCATCTCATCCACACCGCCAACACTTCTCTCATCGACATCCGTCTCGTGAACCTCACGTCTGCTGTAGACTACAACGCGACTAGATACGCGTTGCACCTGCTACTCGTGTCTACAGACGATCGGGGACAATCCTGGAACTACACTATGCGGCAGAGCTTGGATGACGAACATACTCCTGGTGTTTTTGAGATAGTCGAGATCAAAAGCCCTAGGTCGTCAATGGGCGACGGTGGCTTTCTCCAGTTCCGACCCGTCGCGTACACGGACGCAGAACGAGATGTGTCCTCTTCTACCAACACACACGTATCGAACTTCAACCGGACCTCATTGCCGCCACACAGTACCCTGCGACAGTTCTACAGCGATTTGAATGAAGAGCCGTTGGTTCAGGACATGTTCCTATCCTTCGGTCTCGGCGGCGATGGATTCTACAAGCAGCACAATTATACCGCATGGTCATTCAGTCTTGGCTACGGCGCTCCACCAGTAGAGGGATTCTCTCtcttcgtcatcatcatcatctctataGGTCTCGGAGTCCCAGTACTGCTCGCTATGTCTGGCATCACGTATGTACTGGTCAGGAGATACCGGCAAAGGAATCCCCCAACTCGGCTGACTAATGacgaataa
Protein Sequence
MDACTDKIPCKKYITEGKAVMSLSTDKVFYNPVQEFNRDLSIAVLNVFTAQFREEKLAQVQSKAEKRQKEGKNPNPTILTDENDTTEELVTILEPLSATGLRAIRYAKEVANVSKIIANDLSRNAVEVIRENIVSNGLEGKVEPNHDDACMVMYKHKDKKKRFSAIDLDPYGCPSIFLDAAVQAVQDGGLLLITATDMAVLAGNSPETCHAKYGAVSLKTKACHEMALRILLQCISSHASRYGRYIVPMLSISADFYIRVFVKVYSGQEQVKKTSSKLSMVYQCTGCGTMSLQPLGGFKPNPTERRPEQIKSYLPTVPPVDKHCVHCNSRHRLGGPIWSASIHDIPFVSSVLSHVSEYPQNFGTAKRIQGVLSMVKEELDVPLYYSMEQLVGTAHVETMKMNLMRSAIMNAGYQVSYSHAWKNSVKTDAPAHFVWDIIRSWAIQHPVKPERLESDAIAKHLMSHEIKHTIDWTVRNDANPDSRREHCLRFQTNPTRYWGPGCRSAVNVGELTNSKRIAKQDTRRYKRKHSPTTLDEACKKGNTDSDITPILNPGCKDCTDVNPLFYIKAESTHDTIHQIWDFTRGVPTVIYLIASPNSTLNITWEKSIPSEFELSEKPKYSFAVAIDKNISRPLQNQPAQNTRQKETDTVHLRLNPASSPEWQHHEVDPGTVQHNHHLVEQHLTTATAAHAPRGLHHVGHTADAEQSDLKWWSSIINLTNKSICGRQYKLEIFSDASLTGWGIHCDGESDCTSIVQPPYPDGEHLLRQAFRRRGLLESSLNIMLAYLKIYEYDDLEDSGHISPKCPQQYFSLRHLSWLRNEKVTTDKEAMLMVHAHYKDGKRSGIIDIKLDLLPFKDYATTLPHLIHTANTSLIDIRLVNLTSAVDYNATRYALHLLLVSTDDRGQSWNYTMRQSLDDEHTPGVFEIVEIKSPRSSMGDGGFLQFRPVAYTDAERDVSSSTNTHVSNFNRTSLPPHSTLRQFYSDLNEEPLVQDMFLSFGLGGDGFYKQHNYTAWSFSLGYGAPPVEGFSLFVIIIISIGLGVPVLLAMSGITYVLVRRYRQRNPPTRLTNDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-