Cbil011462.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- -
- Assembly
- GCA_958496255.1
- Location
- OY292460.1:13803674-13804069[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.5e-09 1e-05 25.8 0.1 8 42 4 38 1 40 0.79 2 3 4.8 6.6e+03 -2.4 0.0 18 23 82 87 71 90 0.59 3 3 5.2 7.1e+03 -2.5 0.0 12 21 120 128 114 130 0.71
Sequence Information
- Coding Sequence
- atggagAATGCGATAGCAAACTTGAAAAACCGAAAATTCTCACTTATCGGCGCATCAAAACATTATGGTATTCCTAGAACAACTCTCAGGCGATACTATCGTCATTCCATGAAAGCAGGGTCTTCTGTTAAAGACCTTCGCTCAAACCTGGCAGTAAAAAGAGTTTTTACAGAAGGACAAGAGAAGATGCTTGTGGACTATATCAAAGAAGCAGCAGTACTTCAAAATGGACTAACTATTAAATCTGTCAGAAAACTGGCATATCAGTTTGCAACAACTTATGCTATAAAATGCCCGACTACTTGGGATGATGAACAAATGGCGGGTGAATTTTGGCTACGTTTGTTTAGGAAACGCTATCAAAACGAAATCTCCCTTCGCaaaccagcgggctga
- Protein Sequence
- MENAIANLKNRKFSLIGASKHYGIPRTTLRRYYRHSMKAGSSVKDLRSNLAVKRVFTEGQEKMLVDYIKEAAVLQNGLTIKSVRKLAYQFATTYAIKCPTTWDDEQMAGEFWLRLFRKRYQNEISLRKPAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -