Cbil021122.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- -
- Assembly
- GCA_958496255.1
- Location
- OY292471.1:6564118-6565557[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-10 6.6e-07 29.6 0.0 1 40 14 53 14 57 0.95 2 2 0.8 1.1e+03 0.1 0.0 18 28 293 303 292 303 0.91
Sequence Information
- Coding Sequence
- ATGGCTCGCTACAAATGTAAAGGGATTCGGGGTAATTGGACTGAAGACAACATGAAATTAGCACTATCTGCTGTTAAGCGAGGAGTTATGAAAGTATACACAGCTTCAAAAAAATTTGACATACCAAGGCGGACTTTAAGAAGatatttagaagaaaataaagtaaaaaaattggCCTTGGGAAGAAAACCACTTCTAAGCATTGACCAGGAAAAGAATTTGACAAAACGAATTATACGTCTGTGTGAAGTAGGATATCCACTAACACAACGTGTATTACGTACATGCGTAAAGACATTCTGTAATGCGAACAGCATTCCAGTAGAAACTAGAGGCTTAATGATTGGACGAGACTGGTTGAGAGGATTTTTAAAGCGTCACAAGAACATAAGTAGACGAAAAGCACAAAATCTGAACCCTGCAAGAGCGCAAAAGCTTAATAAAGCAGTAGTTATGGACTACTTTGATAAACTTAAGAAGTTAATGATTGATAACGACTTACTCAACAAACCTGAACGTATTTTCAATATAGATGAGAAAGGTTGTCAATTGAAATTACACAAGGCTCCACAAGTATTGGCTCAACGAGGTGTAAAGAGAGTACATTTAGTGGCAGCTGAACATGGTGAAAATGTTACTGTTGTTTCATGTGGCAACGCTTTGGGTCAAGCGATTCCTCCAATGCTTTTGTTTAAAGGCAAAAGAATGAAACCAGAGTGGTCAGATTCATTGCCTACTGGATCCGAAGCCCAGATGACCCCTAAAGGGAGTATGAATACAGAAACATTCGTGAACTGGATTCACCATTTTGCAAAATATAAACTATCTGGTCCTTGTGTCCTGATTTTTGATGGAGCTAAGTGTCATTTGGATTTTTCTATAGTTGAAGCAGCCGATAAATTTGATATCAAGCTTTTTTGTCTGCCCAGCAACACAACGCACGAATTGCAACCGATGGATAAAACAGTGTTCAGATCTTTTGAGTACTTTTGGGACGAAGAGGTTCTAAAATACTGGTCTATTCACGAAGACAGAAAAATCACAAAGCAAAGGTTTGGAGTAATATTTTCCAAAGTGTGGGACAAAGCTGCAACACCCCCCTTAAACATCAAAGCTGGATTTGAAGCTACTGGAATTTACCCATTTAACCCAGAGCGAATCCCAAATGAAGCGTATGCTCCAAGTATACCAACTCACAACCCCATAACATCACCTGTGCCTTTATCTTCTGAAAATGATGATACTGACAACACCGATGCCAGTGAGAGTATTTTGActgaaaaacattattttacagAGAACCACGATGACAACATCCCTGCACCTACTCAGTGTCGTCCTGACCCAAATGATAGACATGAGAACCCTTCGCTTACTGAGCGTCCTAATTCAAATGAAAGTGGTGAAAATCCTCCGATTGATATGCTCCTTAGTAACTAA
- Protein Sequence
- MARYKCKGIRGNWTEDNMKLALSAVKRGVMKVYTASKKFDIPRRTLRRYLEENKVKKLALGRKPLLSIDQEKNLTKRIIRLCEVGYPLTQRVLRTCVKTFCNANSIPVETRGLMIGRDWLRGFLKRHKNISRRKAQNLNPARAQKLNKAVVMDYFDKLKKLMIDNDLLNKPERIFNIDEKGCQLKLHKAPQVLAQRGVKRVHLVAAEHGENVTVVSCGNALGQAIPPMLLFKGKRMKPEWSDSLPTGSEAQMTPKGSMNTETFVNWIHHFAKYKLSGPCVLIFDGAKCHLDFSIVEAADKFDIKLFCLPSNTTHELQPMDKTVFRSFEYFWDEEVLKYWSIHEDRKITKQRFGVIFSKVWDKAATPPLNIKAGFEATGIYPFNPERIPNEAYAPSIPTHNPITSPVPLSSENDDTDNTDASESILTEKHYFTENHDDNIPAPTQCRPDPNDRHENPSLTERPNSNESGENPPIDMLLSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -