Basic Information

Gene Symbol
Kdm5
Assembly
GCA_958496255.1
Location
OY292475.1:493847-533613[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-24 1e-20 74.5 0.0 2 89 101 184 100 184 0.93
2 2 2.5 7.1e+03 -1.9 0.1 44 69 1286 1312 1273 1327 0.66

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACTAATGTGGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAACCGGACAACTTCACGTTCACGCCGCCGCCGGAGGCCCCGGTGTTCGAGCCCACGGCCGAGGAGTTTCTGGACCCCTTGGCGTACATCAGCAAGATTCGTCCTATCGCCGAGAAGTCGGGCATCTGCAAGATAAAACCTCCTGCGCATTGGCAGCCACCGTTTGCCGTGGACGTAGACCGGCTGAGGTTCACGCCCAGGATCCAGAGGCTGAATGAATTGGAGGCCATAACCCGAGTGAAGCTGAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCTCCGTGCTGAAGATCCCCACGGTGGAACGGAAGCCGCTGGATCTGTTCGCACTGCACAAAGTTGTGAAGGATGCTGGTGGTTTTGAAGTGTGCTCAGCGGAGCGCAAATGGTCTAAGATCGCGCGTCGCATGGGCCACCCTCAAGGAAAGGGCATCGGCTCCATCCTCAAAAATCACTATGAGAGGATCCTGTATCCTTACGATGTGTTCAAGAGCAATGGCGCTATCGGAGATAATAAGGAGACCAAGATAGAAGTAAAACGCGAGCCGACCCCCGAAACAGCCCGCGCCCGCTCCGCGTCTAAATGCCCCGCGGTGacccccccgccccccgcctCCCCCGCGCGACGCTACAAGGCGGAGCCCGAGCCCGCCGCGGAAGGCAGCCACACCGAGGGTGCTTTGCCCCCCAACAACGATAAAGGAATGAAGACACCGGTCAAAGAGGAGAGCCCGGAGACCAATAGACGAAGTCCCCGCGAGAACAAATGGATGTCCGGCACGGGCAGCTGTGGGTCCCGCGGGCGCGTGACGCGCTCGACGCGTCTCCGCGAGCATCGCATGTCCAACATGACGGTGTCGGTGacgcccgcgccgccgcccgGCGCGCCCCCGCCCGGCGCCGTCAGCAGCGTCAGCGACCCGCTGGCGAAGTATATGTGCCACGTGTGCGGTCGCGGCGACGTTGAAGAACAGATGTTGTTGTGCGACGGTTGCGATGACTCCTACCACACGTTCTGCCTTCTGCCGCCGTTGGCCGACGTGCCCAAAGGGGACTGGCGCTGCCCAGTCTGCCTGGCTGCAGCGGTATCGAAACCAACAGAGGCTTTCGGTTTCGAGCAAGCCTCGCGGGAATACACACTGCAACAGTTCGGTGAGATGGCGGACCAGTTCAAATCGGACTACTTCAACATGCCCGTacatATGGTACCAACATCGACAGTAGAGAGGGAGTTCTGGCGCGTGGTGTCTTCTATAGACGAGGATGTCACTGTGGAATACGGAGCTGATCTACACTCTATGGACCATGGATCTGGTTTCCCTACAAAGTCCAGCGCTCACCTATACCCCGGCGAGCAACAATATGCGGAGTCGAGCTGGAACCTCAACAATCTACCCGTTCTGGAGGGTTCGGTGTTGGGACACATCAACGCTGATATATCTGGCATGAAGATCCCATGGCTGTACGTGGGCATGTGTTTCGCTACGTTCTGCTGGCACAACGAGGACCACTGGAGCTATTCCATCAACTACCTGCATTGGGGAGAGCCTAAGACTTGGTATGGAGTACCGAGCTCGAAAGCGGAGCAGTTCGAGGCGGCCATGAAGGCGGAGGCTCCCGAACTGTTCCAGCTGCAACCAGACCTGCTGCACCAGCTGGTTACAATCATGAACCCCAATGTACTCATGAAGGCGGGGGTTCCAGTCTACAGAATGGACCAACACGCGGGTGAATTCGTGATAACATTTCCGCGGGCTTACCACGCGGGGTTCAACCAGGGATACAACTTCGCTGAGGCTGTTAATTTCACGCCCGCGGACTGGttGAAAATGGGCAGAGAATGCGTACTCCACTATTCCACCCTCCGCCGCTACTGCGTATTCTCTCACGACGAGCTGGTCTGCAAGATGGCGCTAGAAGCAGACTCCTTGAGTCTCACCGTCGCATTAGCGGCCTATAGGGACATGCGGACGATGCTGCATACGGAGCGCAAGCTGAGGAAGAATATCCTACATTGGGGTGTAACGGAGGCTGAACGCGAAGCTTTTGAATTGCTCCCGGACGACTCCCGCCAGTGCGTGTCGTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCGCGTGCACCTCGCACGTCGCCTGTCTGAGGCACGCCGCCGCGCTCTGCGCCTGCGCACCGCACCAGCACAGGCTGAGATATCGATACACGCTGGACGAGCTACCAGCAATGCTAGAGAAACTGAAGAAGAAGTCGGAACAGTTCCGTGAATGGGCGGAGGGAGTTCAGAACGCACTCGACCCCGACACACCCAAGACCTGCGACCTGGACGGATTGAGGGCACACCTGCATCGCGCTACAGAGCTCAAGatgCAGAAAACGGAGCTAGTCCGCGCCCTAGAGACGGCCATCGAGGACGCGGAGAAGTGCGCCTCCGTGATCCAACAGCTGGACCTCAACAAGATGCGCACGCGCACGCGCCACCACGACCCCAAGTACAGGCTCTCCATACACGAGCTGACTCTCTTCGCGGCAGAGATCGACAGCCTGGCTTGTGTGTTGCCAGAAGGGTCGGCCGTCAAAGAAGTACTCCGTCAGACATCAGAATTCGAAACACGTTCTACAGAGCTGCTTAACAAGGACTTAGAGAAGATAGACACAGCATACGTCAGGGAGTTGGAAGAGACGGTAGAACTAGGCGGTCGTCTCTGCATCGTCCTTCCACAACTGGAAGCGTTGACCGTCCGCCTCGCTCAAGCACGGTGGCTGGAAGATTCCCAGCATCACAGGGACAACTGCAACTCATTGACTCCGGCCGTGCTTACACAACTCCTGGCTAAAGCAGAGGATTTGCTACCACATCTGTCGATAGAGAAGGAACGGGCCATCCTTTACAAACTTCAAGCTGAAGTAGAAGAATGGGAGAAGAAGGCCCAATCGGTGCTTATCGACACCAGCAAGCCTATAGACGACTACGAGTTCCAGTACAGCACTATAGCGGAGTTAACGCAGCTGTTATCGGAGGGAGCCGACATCGAGGCTGCATTGCCCTCCTACCACACTCTGCAGACCGCCATCACACATGCTAAGGATTGGCTGAACAAGGTTGAAGAGATGCAGTCCAAAGACCTGTACCCCTACATGCACAGTGTTGAAGCTCTGGTGAAGAAGAGTCAGGGGCTACCACTAGCGTTGTTGGAGAAGCAGCAACTGGCCAGCGCTCTGCAATCAGCAAGGGATTGGCAACGCGGCGCCGCTGAGATGTTCCTTAAGAAAAACTTACCAGATAAGAAgAATTGGCCCCACACGCTGCTAGAAGCCCTCTCCCCCCGCACCACCCCCTCGGGGGGACGTCGTCGCACACAACCCTCGCTGGAGACTACCCTCTTCTTGGACAAGTTCAATGAGGAATCCACCCCTACAGAGATAGTGGCAGCTTTCAAGCAAGCTGAGACACGCGAACTGCAAGCTATCAAGGAGCTTAGagccCGTAATATGCGCAAAGACGTGCGAGCGCCGCCCGCCACTACCGTTACATTCtgcatctgtcaaaaaaggcaATATGGCGTCATGACGCAGTGCGAACTTTGCAAGGATTGGTTCCATGCATCGTGTATCGCGAACGCGCGCGACGATCGCGAGGAATCCCCGGACCGCGAGGGATTCCCCAGCAGCGACTCCAAGTTCCTCTGCCCCGACTGCGTGCGAACCAAGCGGCCGAGACTAGACAGGATCCTGGCTTTACTCgtatggCTACAAAAGCTGCCCGTCCGTCTAGCCGAGGGCGAGGCGTTGCAATGCGTCACGGAGCGTGCCATGGCGTGGCAGGACCAGGCCCGCGCGATGCTAGCGCAGCCGCATCAAATGCACTCGCATCAGGCGAGCAGAGAAAAGGCCGACAAATTGAACGCAGAGCTGAAGAAAGCGACCGGAAGAGGTCACGAGAACTCAAGATCGTCTGCATCAGTTGAGCACGCGTATAGCGCGACGCCGAGATCACCAGGCGCGCGACTGCCGCCCGCTGCGCTGCAGAAActggaggacttaatgctagaAGGGGATCTACTCGAGGTGGTGTTAGAAGAGCAGCAGCAAGTGTGGGAGGCCGTGAGCCTGGCTAGAGGCGCGGCGGGGCGGCGGGGCGCGCGCGTGTTAGACGCGGGCCGACGCAAGCgaccgcgcgcgccgccgccacGACAGGCCAAACGGACCAGGAACCATCCACATAATGGTAAGGGAGGGTTACAGGAGGAAGTGGCAGGTAGAGAGGGGAAGGGACAAGACAAGCGGACTTGGAAGGAAgcagCTGGtccatcatcatccacagcggCGGCCTCGACGTCGACGAAACCGTCAACATCTTCCAAGCGCGGCGGGGCCACCACCACGAACTATCTCAACAGGAAACAGGGTTTATCGTCAGCATCTGGTTTGATGATGCGAAAACACTACATGGCTCGCCAGGAACGACGGAAACGTGGCTCCGCTAGACACAGagGGTCTACTCGCGGCGGCGCCAGTGCATCATCAGGTCGGTTGGCGCACGACAGCAGCACTTCCTCAATGTCCTCGGGAGAAGACGAAGATGACTGCGCGGCTGTCAACTGTCTCCGACCGACTGGCAAAGAGGTGGACTGGGTCCAATGCGACGGCGGTTGCGACGAATGGTTCCACATGCATTGCGTGGGCGTTATCAAAGGTACGCTCGGAGAGAACGACGACTACGTCTGCGGCTCCTGCGCGAAAGACAACAAGCAGTGA
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLFALHKVVKDAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAIGDNKETKIEVKREPTPETARARSASKCPAVTPPPPASPARRYKAEPEPAAEGSHTEGALPPNNDKGMKTPVKEESPETNRRSPRENKWMSGTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPPGAPPPGAVSSVSDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAAAVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHTERKLRKNILHWGVTEAEREAFELLPDDSRQCVSCKTTCFLSCVTCACTSHVACLRHAAALCACAPHQHRLRYRYTLDELPAMLEKLKKKSEQFREWAEGVQNALDPDTPKTCDLDGLRAHLHRATELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRSTELLNKDLEKIDTAYVRELEETVELGGRLCIVLPQLEALTVRLAQARWLEDSQHHRDNCNSLTPAVLTQLLAKAEDLLPHLSIEKERAILYKLQAEVEEWEKKAQSVLIDTSKPIDDYEFQYSTIAELTQLLSEGADIEAALPSYHTLQTAITHAKDWLNKVEEMQSKDLYPYMHSVEALVKKSQGLPLALLEKQQLASALQSARDWQRGAAEMFLKKNLPDKKNWPHTLLEALSPRTTPSGGRRRTQPSLETTLFLDKFNEESTPTEIVAAFKQAETRELQAIKELRARNMRKDVRAPPATTVTFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSSDSKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARAMLAQPHQMHSHQASREKADKLNAELKKATGRGHENSRSSASVEHAYSATPRSPGARLPPAALQKLEDLMLEGDLLEVVLEEQQQVWEAVSLARGAAGRRGARVLDAGRRKRPRAPPPRQAKRTRNHPHNGKGGLQEEVAGREGKGQDKRTWKEAAGPSSSTAAASTSTKPSTSSKRGGATTTNYLNRKQGLSSASGLMMRKHYMARQERRKRGSARHRGSTRGGASASSGRLAHDSSTSSMSSGEDEDDCAAVNCLRPTGKEVDWVQCDGGCDEWFHMHCVGVIKGTLGENDDYVCGSCAKDNKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
-
80% Identity
-