Basic Information

Gene Symbol
XBP1
Assembly
GCA_958496255.1
Location
OY292456.1:14903207-14906851[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-18 2.5e-15 56.9 13.5 2 63 41 102 41 104 0.94
2 2 0.0037 4.1 8.1 0.3 34 54 87 107 87 113 0.90

Sequence Information

Coding Sequence
ATGAGTGGTCCAATCATTATTACCGTACCCAACAACTATCTGATGGAGGAGGATTCGAAGATGGTTGTGGACGTGTCATCTTCCCCGTCCAGGAAGCGGAGGTTGGACCATTTGTCATGGGAGGAGAAGATGCAAAGAAAGAAAATGAAGAACCGCGTGGCCGCGCAAACTTCCCGCGACCGCAAAAAGGCTAAAATGGACGAAATGGAGTTGCGCATCGACAGCCTAGAGGAGAGAAACGAGAAGTTGCTAAGCGAGGTGGAGAGTTTGAAGGCGCTGAACGAGCGGCTGATCAGCGAGAATAGCAGGTTGAAAGAGTCCGCGGCGCGGAACGTCACGGAGGCCCCTGGACCGGCAGAGTCCCCTCGGCAGAAGGAAGGGCCTCCGGTGGCGATCCGCGCGGCGCGGCTCTTGCTACTGATGCTTCTCTCGCAGAGCTGCTCGCGCACCTCGACTCAGACGAGTACCTCGACACCCTGCATCAGCTCGCAGACTCCCTCCTCCAGGAAATTGATGCAGGAGCTGCAGGAGCGAATCagaatGAGCAAACCAGGGGCTCTGGAGAGTGCCCTAAAGGAGCTGAAGTGGTGGGGCCCCCAGCAGAGCAACTGGAACCCAGTGAAAGTCGCATCCTAG
Protein Sequence
MSGPIIITVPNNYLMEEDSKMVVDVSSSPSRKRRLDHLSWEEKMQRKKMKNRVAAQTSRDRKKAKMDEMELRIDSLEERNEKLLSEVESLKALNERLISENSRLKESAARNVTEAPGPAESPRQKEGPPVAIRAARLLLLMLLSQSCSRTSTQTSTSTPCISSQTPSSRKLMQELQERIRMSKPGALESALKELKWWGPQQSNWNPVKVAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01171208;
90% Identity
iTF_00661014;
80% Identity
-