Cnol016081.1
Basic Information
- Insect
- Campoplex nolae
- Gene Symbol
- -
- Assembly
- GCA_037893425.1
- Location
- JBBLXU010004352.1:10479-14537[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.052 4.3 8.0 0.3 1 20 210 229 210 230 0.96 2 12 0.011 0.94 10.1 4.6 2 23 371 393 371 393 0.91 3 12 6.6e-05 0.0055 17.1 1.6 3 23 451 472 450 472 0.97 4 12 6.3 5.3e+02 1.4 7.6 3 23 559 580 558 580 0.95 5 12 0.038 3.2 8.4 0.2 1 23 632 655 632 655 0.95 6 12 0.2 17 6.2 1.3 1 23 701 724 701 724 0.96 7 12 0.0024 0.2 12.2 0.1 3 23 747 768 745 768 0.93 8 12 0.14 12 6.6 4.4 2 23 857 879 856 879 0.96 9 12 0.011 0.94 10.1 2.4 2 23 893 915 892 915 0.94 10 12 0.00077 0.065 13.8 0.1 2 23 961 983 961 983 0.93 11 12 0.052 4.3 8.0 1.6 1 23 1070 1092 1070 1092 0.98 12 12 0.00019 0.016 15.7 0.5 3 23 1109 1130 1108 1130 0.97
Sequence Information
- Coding Sequence
- ATGGCGTCCACAGTGGCCCGTGAACAATTGGGGGTAATAATGGATCAACGAATAAGTGAGATCCATAGTGACAGTTCGAGCAGTTGCGAGGATCGAGAAGCGCGAAAACGTTTGCGCGAGGATCCGGACAACAATATTGGTGGCAGTCCGAAAAAACGTCGGAAGCAAACGACACCGGTTAGATTTCCAGCGTCATTGATGAATAACAACGGTGAGAGAAACGAGTTCGAGgatgacgaggacgaggaaggggtggaggaggaggaggaggaggaggaggaggaggaggaggaagaagaagaagaagaagaagaagaagaagaagcgcaacgggaggaggaggaggatgaagAGGAGcgggaggaggagaaggaggaaggGGAAGTGGTGGATGATGCCGAGCAACGactgaacaagaaaaatttccaaagtgAGGCCGAACCGGGCGAGAGAAGGAACAATGGAGGAACAACGACTACTCTGGTCATCGAAGCTGACGAGACGCTGCTGGAAGGTAAGCCAAGAACGTTATCACCGCAAAGGTTTGTGCGAAATATCATCGGACAAACGATAGACGCTACGGGAACAATGGCAAATTTTGCCAAAGACGAGAATCTCAACAGTGAATTCCGCTGTCAGTTTTGTGCCCTTTCGTTCAACGAGAAGGATTTATTGTTGCAACATTTAGAGTGCGAGCATGCGATAGTTTGTAACGCGGCTCCGAGTTGTTCACCTCTCTCCGATCAAGTTAGGGTCAAGTTAGAACCGTCGATTCAGATAATCGAGGATCCGGAGAGTCCGGTCAATCTTTCGGGTTTGGGTATTAAAAGCTTCGGTGCCAATTGGCTCCATTCTCAGGCCCAGGTGCAGCATCATCACCACCaccaacagcaacaacaacaacaacagatTCATTTAAAATCTCAAAACTCGGAAGATTGGACAACTCCCAGTCCGGTAACTTCCGTTCCCAATCATCTTCAGGCTCTCACTTTTCCCGGTGCCCTTGCCCAGTATCTTCCCCTGCCGGGATTTTCCCTGACCGACGCTGGTCAACTAAGCCGGCCTCCCGTCGGTCCAACACCCATCAGAATCTTCAATCCGGACGCGTATTGTGATCTTTGCAACAAGGAATTTTGCAACAAGTACTTTCTAAAAACCCACAAAGCCAACAAACACGGGATTTATGCGGATTCACCTTCGCAAAATGCCGGTGATAACGGTATTCCAGCGGGTATGTTTACCGGGGCATTTGCCAGTGGTGGCGGCGCCGCCGTCAAGTCGGAACAATTACAGAGGCTCGAAGTTCCCACCCCGCTCGTTTCCGTACCCTTGAGCAACGCCGTACTCTGCGAAGTGTGCCAGAAACGCTTCAAAAATGAGGATTCCTTGAGAAAACACAAGCAAAAGGTTCACAACGAGTCAATCGATAATCAAGAATCCCATTCTCTGCCAGCAACGGGGAGTAGCGCGGAGGATGATCGTGAAGTCTCGCGAAACAGTCCTAGCGCCATGGAAGCACTATTCAAGCAGGAATTCGGGGTCGAACAAGAAGACTCAAAATTTATGCCTGCCCCGCGGCATCTCTCGCCGCAATCCAGCCAGCAAGCCAGAGACTCGGGATTCAACGTCGATCGTCTCAGACGTCTCGGGGTCATCAATCCCGAGGCATTCTGCGAAATTTGTTGTAAGGAATATTGCAACAAGTATTTTCTACGAACGCACAAGATGAAGAGACACGGAATTTTTGTCCAAGAGAGCGAAAAACCTCCAAACAATCCTGGCAATGCAGCGACATGGCATCAGATCCAAACGAGCCCTCTCAATCTCATCGTGACCGATACCAATACCGGCGGCAGTTCCTCGGAATCCGGCGATCGTCCCGGAGAAGATTTCGAGTGCAAACCTTGCGGCATACGCTTCCAAACATTGGAATTGTATCGTGCCCATCGGGCCAAAATTCACGAAACCGACGAGTCATCCAAACACGAGTTTGACACGGACCCGATCACTGATCAACGAAGCGATTCCATTTCTGAGGATCTCCAGAAACTTCAGTCCATGATTTTGCAAATAAACGGCTTGGAAGCTAGTAAATCGTTCAACTGCGGATTATGCAATAGAGAGTGCGAGAATTTCGGTATTTTACGTACCCACATGAGACTGGAACACGGTGGAATCGTCGATGAAATCTCCTCTCGGACCAACGAGAATTCATCCAATGGCGCTACAATCTTCTGCACGATCTGCGAGAAGGAATATCAAACTCCGGAAGCACTGAGACAACATATCACTGAGGAACATCAACGGAGTAACAATAACTCAAACAACTTTTCGACTACGGCTGCGACGACGATCCAgtcgcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacctCCGACTACATCACCGACTATTTCCGTTCAAACTTGTGTTCCTACGTTAACGACTCCCGTCACTGTTCCAACCCCATCGACGGGGTTAACACAAACCTCAACGGCTTCAcagcccgaaaaaaaaattatttcgatgacaCCAACGTCGAGTTACTGCGAGCTGTGTCGCAAGGAATTGTGCAACAAGTATTTCATGAAGACGCACATGCAAAAGATGCACAACATTGAGATTGAGAACGGTTCGCAGATCGGTGGCGTGGTCTGCAATATATGTAACAAAGAATTGTGCAGTAAATACTTTTTACGCGTGCACAAGCAAAACACTCATGGGATCGTTGACGAGGCGGCGACTACCAACAATAAGCAAGAAACTTTCGAGTCATCGAGCAACGAAGATGCGGCAGCATTAAAGCCTGATCAACTTGGCGATTTGAGCCATCGCTATTTCACTCATTTCACGGAAGTATGTCCGGTTTGCAGTCGTCGGTTTAGAAGTATTAAATGGCTAAAGGCTCATCTTCTCGGTGATCATGGAAAAGTGGGAATTGAAAAGTGGCGCGAGCTTGAGAATCAGTATCAAAATACAACGAGAGGCGGCGGTGGAGGTGGTAGAAGCGCGGTTGGTAGCGTCGCGGCTCGAGCGGGACCGCTCGGTCAGAGCATAAAAATACCAAACGGTTTGGAGATGGTTCAACAGCAAATGAAAAGCAACGATTACGTTGGAAATCTCGGAAATCAAGTACTGTCGAGTTTTTTCGGTTCCACAAACGAGGAACAACGGAGCAAGAGTTATCGTTGCTCCTATTGCAACTTCACGACAACGGTATtgccatttttgtttcttcacgAGAGATCCCATACCAGTCCTCATGACAATAATGCTACTGCCGAAAGCGGCTCGATCCTGTGTCCGATTTGCTCCCAAGTTTTCGGTCAACCGGAGCAACTGCAGCATCATCTGTTTACGCGGCATCAATTATCGGGTTTGCTCTCTCAAATACCTGCCCCGTCGATCAACGGCCCGAGACTGCTCGAGGGGGCAGCCAATATCGACAAGAATAATGAGATTTATGAGAAACTCGAGTACGAAGGAGGTTCAAAGGAGGAACAGGGTCGATCGAGTCCCCAAATTTCTCTAGGAAACACCGAAACTCTGATCAAGAGTCAAAAAGCTGAGGAGCCGGTGGTTCAGGTTACGCCTCAAGGAGCTTACAAGTGTGCTCAGTGCTGTTACGCGAGCGCGAATCTCAACAGAATTAAGAAACACGTTAGAAAGGATCATAAAGCGATGGGTGATGCGACCGAAAGTGTAATCGACGAGTTGAGCAAAACCCTGAGAGATGTCGCGAACAAGCACAAATTACCGGCCAGTTACGCAATGCCTCAAGATATGAATTCGAATCCCGATGGTAGCACGGTGATGCAACCATTTTTGATCGAAGAACGGGACGTTGCTGAAAATATGGACGATGAAACGAGCCAGGAGAAACGTTTTGCACCTGCCCTCGTTTATTTACCGGTAAGAGCAAGGATCAACAGTTCCCTCACAACTTCTTTCACCCTTAGTCCTGCCTGA
- Protein Sequence
- MASTVAREQLGVIMDQRISEIHSDSSSSCEDREARKRLREDPDNNIGGSPKKRRKQTTPVRFPASLMNNNGERNEFEDDEDEEGVEEEEEEEEEEEEEEEEEEEEEEEAQREEEEDEEEREEEKEEGEVVDDAEQRLNKKNFQSEAEPGERRNNGGTTTTLVIEADETLLEGKPRTLSPQRFVRNIIGQTIDATGTMANFAKDENLNSEFRCQFCALSFNEKDLLLQHLECEHAIVCNAAPSCSPLSDQVRVKLEPSIQIIEDPESPVNLSGLGIKSFGANWLHSQAQVQHHHHHQQQQQQQQIHLKSQNSEDWTTPSPVTSVPNHLQALTFPGALAQYLPLPGFSLTDAGQLSRPPVGPTPIRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYADSPSQNAGDNGIPAGMFTGAFASGGGAAVKSEQLQRLEVPTPLVSVPLSNAVLCEVCQKRFKNEDSLRKHKQKVHNESIDNQESHSLPATGSSAEDDREVSRNSPSAMEALFKQEFGVEQEDSKFMPAPRHLSPQSSQQARDSGFNVDRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIFVQESEKPPNNPGNAATWHQIQTSPLNLIVTDTNTGGSSSESGDRPGEDFECKPCGIRFQTLELYRAHRAKIHETDESSKHEFDTDPITDQRSDSISEDLQKLQSMILQINGLEASKSFNCGLCNRECENFGILRTHMRLEHGGIVDEISSRTNENSSNGATIFCTICEKEYQTPEALRQHITEEHQRSNNNSNNFSTTAATTIQSQQQQQQQQQQQQQQQQQPPTTSPTISVQTCVPTLTTPVTVPTPSTGLTQTSTASQPEKKIISMTPTSSYCELCRKELCNKYFMKTHMQKMHNIEIENGSQIGGVVCNICNKELCSKYFLRVHKQNTHGIVDEAATTNNKQETFESSSNEDAAALKPDQLGDLSHRYFTHFTEVCPVCSRRFRSIKWLKAHLLGDHGKVGIEKWRELENQYQNTTRGGGGGGRSAVGSVAARAGPLGQSIKIPNGLEMVQQQMKSNDYVGNLGNQVLSSFFGSTNEEQRSKSYRCSYCNFTTTVLPFLFLHERSHTSPHDNNATAESGSILCPICSQVFGQPEQLQHHLFTRHQLSGLLSQIPAPSINGPRLLEGAANIDKNNEIYEKLEYEGGSKEEQGRSSPQISLGNTETLIKSQKAEEPVVQVTPQGAYKCAQCCYASANLNRIKKHVRKDHKAMGDATESVIDELSKTLRDVANKHKLPASYAMPQDMNSNPDGSTVMQPFLIEERDVAENMDDETSQEKRFAPALVYLPVRARINSSLTTSFTLSPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00266035;
- 90% Identity
- iTF_00266035;
- 80% Identity
- -