Basic Information

Insect: Campoplex nolae
Gene Symbol: -
Assembly: GCA_037893425.1
Location: JBBLXU010000432.1:3178128-3180335[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.31 26 5.6 1.0 3 20 201 218 199 221 0.91

2 10 0.8 67 4.3 2.2 1 23 227 250 227 250 0.96

3 10 9.3e-05 0.0078 16.7 0.2 1 23 256 278 256 278 0.98

4 10 0.35 29 5.4 0.8 1 23 284 306 284 306 0.96

5 10 3.5e-06 0.00029 21.1 0.2 2 23 313 334 312 334 0.96

6 10 0.13 11 6.7 1.3 3 23 343 364 342 364 0.93

7 10 1.1e-06 9.5e-05 22.7 2.5 1 23 368 390 368 390 0.98

8 10 0.031 2.6 8.7 2.9 1 23 395 417 395 417 0.98

9 10 6.9e-08 5.8e-06 26.5 0.5 1 23 423 445 423 445 0.98

10 10 0.00045 0.038 14.5 1.1 1 21 450 470 450 471 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.31	26	5.6	1.0	3	20	201	218	199	221	0.91
2	10	0.8	67	4.3	2.2	1	23	227	250	227	250	0.96
3	10	9.3e-05	0.0078	16.7	0.2	1	23	256	278	256	278	0.98
4	10	0.35	29	5.4	0.8	1	23	284	306	284	306	0.96
5	10	3.5e-06	0.00029	21.1	0.2	2	23	313	334	312	334	0.96
6	10	0.13	11	6.7	1.3	3	23	343	364	342	364	0.93
7	10	1.1e-06	9.5e-05	22.7	2.5	1	23	368	390	368	390	0.98
8	10	0.031	2.6	8.7	2.9	1	23	395	417	395	417	0.98
9	10	6.9e-08	5.8e-06	26.5	0.5	1	23	423	445	423	445	0.98
10	10	0.00045	0.038	14.5	1.1	1	21	450	470	450	471	0.92

Sequence Information

Coding Sequence: ATGTTACAGAACAGCAAACCGTCCGAGGTGACAGTGAAAGTGGAGAACAATGAAAACCTGGAAGAAACTGCGATTTCGaagggaaaaatattgagaagaaataaaatcgtatgGATACCAAATATGTTTGAATTGCCGGAAGGTTCGAGTCCGAAATCTTCGAGGCTGGAAAAATTGCACGGGGATTCTCCGCCCAGGGGTGACGAGGCGGAAAAACGAAGCGTTTCGTCTTCTTGcagcggtgaaaaaaattttgagaaaaagaaagaaggggCTTCGATGGAAGTGGCAAGAAAAAGCGTGATTGAGAAATCGGATACGAAAATAGACGATGGTCGAAGTAAGCGACGAGAATCGAGAAgcgttgcaaaaaaattgaacgttatTGAATCgggagacgaagaagaagaagaagaagaatctGCGGACGATACGGACGACGATGGAAATaggaaaacaaagaaattcaGCAAAATCACGGATCTCATAACCGACGAACAAAAAgaagcgattgaaaaatattacagtTGTGATATGTCCGCggtcgatgaaaaacaagttGGAGAGCagctcatttttcttgatcgaaaaaaatttggctgcAAACTCTGCGACGCTTCTTACACTCGACAAGACAAATGTCAAGTTCACATTTGGGCACATCTTGACATGAAACCATATCGATGCAACGCTTGCGATTTTTCCACCGTCACCGTCAGCAATATTCGTTGCCACGTGAGGAAAAGTCATCTCAAAATCAAACCGTACGCATGCGAGATTTGCCTAAAACGTTACGTCACTTCTTTCCTTCTTGAGGAACACTTGAACACTCATACTGGATTGAGACCTTACGCTTGCGACGTATGCAAATTTACTAGCGCTAGCAGACAAGTTCTCAGTTACCACAAAACGACCCACAAACCAGTGAAgGACATAACTTGTAACGTCTGTggtaaagaattttattcaaagagTCGTTTGCGCGCTCATTTGATTATTCACAACAAGGACAAAGCTGCAAACATGTGCAAATTCTGTTCGATCTACTTGTGCAATAGCGAAGCGCTTCAAAAACATTATGCGAACGTACACAACAGGGATTACGAATGCAATGTTTGTGGAAAAAGATGCAAATCGAAGAAAGCATTGAATAATCATCAGAACGTTCATTCAGCTGCAAAGTACAAGTGTACTCTGTGCTCGAACGTGTATAAAAGTAGTCACATACTCAAAGAGCACCTGCTCAAACACGAGGGTATAAGAAAGTACAAATGCAATATTTGTCAAAAGGATTTTGCTCAGCAGTCCCATCTTGCTGCCCACATGGCAGTTCACAGCGACAAAAGatTCTTGTGTCCTGGATGCCAACGTCCTTTTAATCGTCACGACAACATGAAAATGCACACAAAACGATGCGAGGCTTTTCTCGCAAATCCGCAGCTCGCAGTTCTTTTAACAGCCCGAAGAAGCCAAAGTAAAAACCTTACAAAAGATACGGAAAAGGAGGCGGGAGTTGAAAAAACGGTTTTATCGACCGCATCGACACACACTAAGACTGATATGCaaataaacgaagagagagagattgtaAATGTACCAAAAACGAAGGACGAGTACCGCGAAAGCTTCACGACGGTCGTCGTCGAGAGCACGATTCCATGTacctga
Protein Sequence: MLQNSKPSEVTVKVENNENLEETAISKGKILRRNKIVWIPNMFELPEGSSPKSSRLEKLHGDSPPRGDEAEKRSVSSSCSGEKNFEKKKEGASMEVARKSVIEKSDTKIDDGRSKRRESRSVAKKLNVIESGDEEEEEEESADDTDDDGNRKTKKFSKITDLITDEQKEAIEKYYSCDMSAVDEKQVGEQLIFLDRKKFGCKLCDASYTRQDKCQVHIWAHLDMKPYRCNACDFSTVTVSNIRCHVRKSHLKIKPYACEICLKRYVTSFLLEEHLNTHTGLRPYACDVCKFTSASRQVLSYHKTTHKPVKDITCNVCGKEFYSKSRLRAHLIIHNKDKAANMCKFCSIYLCNSEALQKHYANVHNRDYECNVCGKRCKSKKALNNHQNVHSAAKYKCTLCSNVYKSSHILKEHLLKHEGIRKYKCNICQKDFAQQSHLAAHMAVHSDKRFLCPGCQRPFNRHDNMKMHTKRCEAFLANPQLAVLLTARRSQSKNLTKDTEKEAGVEKTVLSTASTHTKTDMQINEEREIVNVPKTKDEYRESFTTVVVESTIPCT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00265984; iTF_01299553;
90% Identity: iTF_00265984;
80% Identity: -