Basic Information

Insect: Campoplex nolae
Gene Symbol: RREB1
Assembly: GCA_037893425.1
Location: JBBLXU010000533.1:1098998-1105612[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00078 0.066 13.7 0.0 1 23 53 75 53 75 0.97

2 16 0.00017 0.015 15.8 0.3 1 23 89 111 89 111 0.98

3 16 2.3e-07 2e-05 24.8 1.3 1 23 117 140 117 140 0.98

4 16 0.019 1.6 9.4 1.1 1 23 244 267 244 268 0.93

5 16 3.8 3.2e+02 2.1 2.8 2 23 274 296 274 296 0.91

6 16 1.3 1.1e+02 3.6 0.3 1 19 354 372 354 374 0.89

7 16 0.0068 0.57 10.8 0.1 1 23 495 517 495 517 0.97

8 16 5.9e-05 0.005 17.3 0.3 1 23 526 548 526 548 0.98

9 16 0.0052 0.44 11.1 3.1 1 23 554 577 554 577 0.97

10 16 0.00047 0.039 14.4 3.0 1 23 1020 1043 1020 1043 0.97

11 16 0.00067 0.056 13.9 0.1 3 23 1352 1372 1350 1372 0.97

12 16 0.29 25 5.6 4.7 1 23 1378 1401 1378 1401 0.97

13 16 0.019 1.6 9.4 1.8 1 23 1458 1482 1458 1482 0.95

14 16 0.55 46 4.8 3.1 1 23 1633 1656 1633 1656 0.96

15 16 0.011 0.96 10.1 0.4 2 23 1713 1734 1712 1734 0.94

16 16 1.4 1.1e+02 3.5 8.2 1 23 1740 1762 1740 1762 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00078	0.066	13.7	0.0	1	23	53	75	53	75	0.97
2	16	0.00017	0.015	15.8	0.3	1	23	89	111	89	111	0.98
3	16	2.3e-07	2e-05	24.8	1.3	1	23	117	140	117	140	0.98
4	16	0.019	1.6	9.4	1.1	1	23	244	267	244	268	0.93
5	16	3.8	3.2e+02	2.1	2.8	2	23	274	296	274	296	0.91
6	16	1.3	1.1e+02	3.6	0.3	1	19	354	372	354	374	0.89
7	16	0.0068	0.57	10.8	0.1	1	23	495	517	495	517	0.97
8	16	5.9e-05	0.005	17.3	0.3	1	23	526	548	526	548	0.98
9	16	0.0052	0.44	11.1	3.1	1	23	554	577	554	577	0.97
10	16	0.00047	0.039	14.4	3.0	1	23	1020	1043	1020	1043	0.97
11	16	0.00067	0.056	13.9	0.1	3	23	1352	1372	1350	1372	0.97
12	16	0.29	25	5.6	4.7	1	23	1378	1401	1378	1401	0.97
13	16	0.019	1.6	9.4	1.8	1	23	1458	1482	1458	1482	0.95
14	16	0.55	46	4.8	3.1	1	23	1633	1656	1633	1656	0.96
15	16	0.011	0.96	10.1	0.4	2	23	1713	1734	1712	1734	0.94
16	16	1.4	1.1e+02	3.5	8.2	1	23	1740	1762	1740	1762	0.98

Sequence Information

Coding Sequence: ATGATTTCAGTGAAGAATACAACGACAACAGCACCGGCAGGGGCGACAGGAACCGAACAAtcggaaaacaaaattaatcatCGTCACAGCAGCGATACACCTACAGATGCAGCTTCATCGCCATTGacATCGGACCAACAAGAGGGAGGAACAACGTACGCTTGTCCAGCGTGTCCAACAGTGGTGACAACATCGCGAGACTTGACGAATCATTTGAGGGGTCACAATTCACCGCGTAGTACAGATTACAGCGGCGAGGACGATTATTCGTGCGGGGTTTGTCACAAGGTGCTGAGTTCAGCGAGTTCTTTGGATCGGCACGTGCTGGTACATTCGGGAGAGCGTCCGTTCAAGTGTAAATATTGCGACATGGCATTTACGACTAACGGTAACATGAACAGACATCTGAGAACAGCTCACGGTTCGTCGCCGCGTGATACGAACGGATACACGGATTCGGAGGGTAGCAGCGATTCCGAAAAGTCAGGAACAAAGCGTCGGCATCGTCACGTCGTCGAGCAGGAgtacaacaacaacgaaattggaaaaagagGTTCACCGGATTTGTTGAATCCATTGGAATCACCGACGAGATACGTCGCCAAGAGAAAACGTTCGGACATTATCGAGGATAcggaaaattcatcgagaaagCATAAAATAATGTTGGGCAATTCCCGTACCGAGATACTAAACGGAGAGATAAAAACTGAGTCCCGTACGGTAATTCACAATTGTCCGGTTTGCGGTAGACTCGATTTCTCGACGAGCGCTCTATTGGAATCCCATTTGGAACGTCATCATCCAGATTTTCCGGCAAAATGCGATCCGTGCAATCTCTCgttcaaaaatcatcgagtTCTCAATCTTCACAAGTACATGAAGCACATAGAAAACGAGAATTCTTCGATGGGCAACAACGGcagaaatttgagaaattcgGTGGTCGGTTTCAACGATTTGactttcgttgatttttcgtcaGTCAAATTTCCGGCGATAGCCCGAGCAGTTTGCGAGCAATCCTTGCACCGTCCGGCTTCCGGCGAAATCGCGAGATTTCAATGCGACAAATGTCTCCGAGCGTTTCCCTGTCGATCGGCACTGGATGCTCACGAGATGGACTGCGGCAGCACGACGAACCAAACGCCGGTATGTTTTTTGGAGGATCGTACCTCCAGGAGAGACGATTTTTTCGCTGGTTTGGATCTCCAGAACAGAGCTGCTCTGAACGAGGCTAAAGAAGGCAAAGATTTGGCTGACATACAGAGCATTATATCGGTAACTTCCGGTCCgatattacaaaattttccacGATCGGATGCTAGCACTCCGGAACATCATCACCAGGTAAAACCGAATCCGAGCATCGCCGGCTCATCCGGATCTTCCGGAACACCATCTTCCTCGGATTATCATCAGGAAGAGGAAGCACAGGACGCTTTCGCCGCGGAGTTTCGTCGTATGAAGCTCAAAGGTGAATTTCCCTGTCGCTTGTGCGACGCCGTATTCCCGAACCTGCGGGCGCTCAAAGGTCACAACCGTTCGCACATGGGAGTAGGACCAGGAATCCCGTATCCTTGCAACATGTGTCCGTACACGAGCAACGACAAAGGCACTCTCGTGCGCCACCTGAGATCCCACAACGGCGATCGTCCCTTCGAATGTTCACTGTGCAATTTTGCATTCACGACAAAAGCTAATTGCGAGAGGCACGTGAGAAATCGTCACGGTAAAGTATCCCGggaagagataaaaagcgTGATAATATATCATCCGAGCGAGGACAGTACCAATGATTCCGGATCGCTCGATAGAACGGAATCGCGTCGGGAAGATGCTCGCAAGTCTCTCGTTTATCCGCCGTCAGCGATGGACGCAAAAGACGAGAACAGCCAGCGTCGCAAAGACTTTTATCTCGGTTTGCAGTTCGGAAACAAACAGAACAATTCCCTCGTCTCCGAGGACGCGAGCCCGATATCTCTAGCGCAATCTTTGCATTACGATAAGAATGAAATGTTGGCGAGATCTCGAGGCTTCTCACAGGACAGCAGCCGAATAAATATCGACGAAGAGGCTGACGACGATGAGGACGATTACGACGAGTACGATTACGAGGAAAACGAGAACGATTACGCCGTTAAATCCGACAACGGCGTTAAGCACCTCGGTTACAACGTTAATTCGAGATCCTCGGAGGATGACGGCACGGTTTCTCTAGTCAGCGATACCAAAACGGCGGGAGCATTGCACCAAAGAGTAGTAGTTCAAGCTAGTCCGatcgacttgaaaaaaagcagcgcAAGATCGTCCGTCGCCGCTTCTACCGGAGACGGAAGCCTCAACGGCGAACAAACCAGAGATAATTCAGGCTTCGCAACCGGCGAAGACGCGCCTCTCGATCTCTCAATGGATGTTCTCGatttgagcaaaaaatcaaACGGCAATCGTGCCCATTCGCCATCCTCGCCGGTAACCACAACGATGTCGAACAACGAGGCTGAATTTGGCCGGAATCAGAAAGAATTTTACGACGCAACCAATCAATTTTTACTGACTCAAGCTTTGCTGAAAGCTGGACAAGCCGGAAATCCGACAGCGTCACTCGAAGCTCTCTACGCCAACGCCCACATGATGTATCGTAATTTCAGTGGTTTTACAGCGGCAGGAGTCGGGGCTGGTATTCTGCCTCCTTATCTCTTCAATCCCCACATACTCGGTCAAGATTTCGCGATCAAGGATCGTCTCCAGAAGGAATTGGTGCGAGGATTGCAGTTGACCAGCGGTGGAAATTTGGTCGAGCCACTGATAGGAAATACCGCCTTCGCCGGAGCTTATCCGCCCGGTAGAGACGTCACGATTTCACGCGCCGAGCTACAAAACGATTACGGAAAAATAAGCGCCGCTAAATTGTCACCGAAAATGGTAACGAGTACGGCGATGAGAGAGCCCAAAATTGAGACGAATCCTCAGTCATCGAATTCCGTTAAAATGGTCATTAAAAACGGAGTCCTTATGCCAAAGCAAAAACAACGAAGATACCGTACCGAACGACCTTTCACCTGCGAACATTGCTCCGCGAGATTCACCCTCCGGAGCAACATGGAAAGACACATAAAGCAACAGCATCCTCAGCATTGGAGCCAAAGACCACGAGGCGGACATTCCACGAGGGGAAGACCGCCCGCGAATCCTCCGAGTATCTTATCAAGCTCGAGCAATCATTCGATCAATCATGTCTCCCTGTCCCAACAGGGCTGCAACATTTTGCCGAAAATTGGAGGTACCGCGGGAGGATTAAATTACGAGAAACATTCCATTTCGGATCAGGTTAAGTACGCGATTCTTGCTCAGCAGCTCAAAGGCAGTAAAACAGAGGAGAATGACACCGAAGAGGAGTTGATAATCGACGAGGGCGCTCAGGAGAATCGGGAGTCGATGGAGGGGGAAGCGCAGCCCCACGCGACCAGTCTTCTTCGAGGAAAGCTCGAGGGTATGAGCGATTTGTACAAGGATAATTCGCGATCGCAGCTCCAGCGAAAAGCTTCCGAAGTTGGCAAGCGAATGGCATtgaaggaggaggaagaaagacGACGAGCGGAGGAGCATCCGGAGCCGATGGAAACTGAGGATTTTAGCAAAGTGGAGATTAAATCAGAGCCGAAAGACGACGAGGAGCGAGAGATCGAAGGAAAGGACGAAGCTCGGGAACCCAGTCAGTCGGAGACTTCGGAATCTGCAGGAAAAGTCGAGCAATCAACGTCGCGGGATTGTCCGTCGAGCGAGAGGAACGAGGACCTCGCAAGTGTTTCCGAATTACTGGACAACGCTTCTCAACAGTATCAACAATTTCAACCTCAGTATATGAGCGACGAGGAAGGCCTCGTAGCTTCGACAAGCGATTGCAACAACTCCGGAAGCGACGAAAAATCCGATTCCGTAAATTCCGCAAACTCGAACAATTCTCAAACGTCATcaaagcgtaaaaaaaagaaaaagaagaagatgaagaaaaagaaatcagcATATTCCATGGCACCTAACAGAGTCATTTGCCCCTACTGCGAAAGACCCTTCCCCTGGACTTCCTCCTTAAGGAGACACATTCTTACTCACACCGGACAAAAACCTTATCAATGTATGTACTGCTCCCTCCTCTTCACCACCAAATCCAACTGCGATCGCCATTTGTTGCGAAAGCACAAGAACGCCGCAAACAAAATTCGTCGCCTGAGGAATTCCTCGTCCCCCGAAACCCTCGAGCAACCCTCGAACAACAATACGaccaacagcaacaacaacaacataaCAAGCAACAATAACAACAGCTCGAGCAGCGCATTCGCCATGAGAAACGTTCCGGAAAGGCCCTACAAATGCAACCTTTGTCCCAGTTCCACGTTCTCAACTCTCGGCAACCTTAAAAAGCACAAATCCTCAAAACACTCGAGAAACACCGGCCCAAAATCCCGTGCCGAATCACCCGCGACCAGCGAGCCTCGCAACAGTCCTATCACCACGTGCAGCAAACAGAATGACAACAGCGGTTACGAGAGCCAATCCTCAACAAACTCCGAGAACATGGATCACATCgagagaatggaaaatttggaaaatcctTGCTCAACCGAACCCGCTAATCAGGACGAACCAATCCCTGAACCGGAAGCCCCGGAAACCCAACAACAAATGCCGGAAACTATCAACGAATCTCCCGACATCACCAACGAAGATAATCCGGACAACAATGGTCAGGAAGCTCCCGAACAATCTTCCAACCCTTCGGAACAACAGATCTCAAAGAATACCGAGAACAATTCAACAGCCAACAACAACGATACCGCTAAAGCTCGTAGATTGTCACCGAGATCCTCGCCCGGACCTACCGACGCTCCCTTCAAGTGTCACCTCTGCGACAGCGGTTTCTCCGAACGTCAGGATTGCCTCGAACACATCAGAATCAATCACACACGATCCTACGAAGTTCTCGTCGCTAAAGGCGCCCTCGATATGGACATCGAAACTCCGgaagaacaacaacaattgCCACAACCACCGCCCAACTCAACGACTCAACACACCAGCGACGGGGAAGAAAAACGCGGCAGATTTCCCGACTACAGCAATAGAAAGgTCGTTTGCGCTTTCTGCATGCGTCGTTTTTGGTCAGCGGAGGATTTGCGTCGTCACATGAGAACGCACACAGGTGAGAGGCCATTTTCGTGCGACATATGCTGTCGCCGTTTTACTCTGAAGCACAGTATGCTGCGACATCGTAAGAAGCACGAATCGGTTGATTCGATGATGTACGTGGGTACGAGCGGCGACGAGGAATCCGCTCCGTCCCAACCACCTACGATAACACCCCGTActcagcaacaacagcagcagcagcagcaacagagCATCAACACAACAAGCTGCGACTCCAGGACACAGGAAAGAATGTCGTTACCAACGGTGGCAACGGTCGCGACCGGCGACGCCGCACCGAGCGGCTTAATGAGGTTCAATCCTTATGAAAAACTAACGACTCTCACTGGCAAAATGGCCAATGCTCAACAAGCCTTCAGCGAATATCCTGCTGACACGGAAAACGATCTCATTTCGAATCTTCTTGGCATTCGCGATAAGAGCATTATCGACAAAGTTCTGCAAGCATCAGCCGATGACGCCGCCAAATTACTCGGTGTTAACAGACAtcacgattga
Protein Sequence: MISVKNTTTTAPAGATGTEQSENKINHRHSSDTPTDAASSPLTSDQQEGGTTYACPACPTVVTTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGSSPRDTNGYTDSEGSSDSEKSGTKRRHRHVVEQEYNNNEIGKRGSPDLLNPLESPTRYVAKRKRSDIIEDTENSSRKHKIMLGNSRTEILNGEIKTESRTVIHNCPVCGRLDFSTSALLESHLERHHPDFPAKCDPCNLSFKNHRVLNLHKYMKHIENENSSMGNNGRNLRNSVVGFNDLTFVDFSSVKFPAIARAVCEQSLHRPASGEIARFQCDKCLRAFPCRSALDAHEMDCGSTTNQTPVCFLEDRTSRRDDFFAGLDLQNRAALNEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHHHQVKPNPSIAGSSGSSGTPSSSDYHQEEEAQDAFAAEFRRMKLKGEFPCRLCDAVFPNLRALKGHNRSHMGVGPGIPYPCNMCPYTSNDKGTLVRHLRSHNGDRPFECSLCNFAFTTKANCERHVRNRHGKVSREEIKSVIIYHPSEDSTNDSGSLDRTESRREDARKSLVYPPSAMDAKDENSQRRKDFYLGLQFGNKQNNSLVSEDASPISLAQSLHYDKNEMLARSRGFSQDSSRINIDEEADDDEDDYDEYDYEENENDYAVKSDNGVKHLGYNVNSRSSEDDGTVSLVSDTKTAGALHQRVVVQASPIDLKKSSARSSVAASTGDGSLNGEQTRDNSGFATGEDAPLDLSMDVLDLSKKSNGNRAHSPSSPVTTTMSNNEAEFGRNQKEFYDATNQFLLTQALLKAGQAGNPTASLEALYANAHMMYRNFSGFTAAGVGAGILPPYLFNPHILGQDFAIKDRLQKELVRGLQLTSGGNLVEPLIGNTAFAGAYPPGRDVTISRAELQNDYGKISAAKLSPKMVTSTAMREPKIETNPQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPSILSSSSNHSINHVSLSQQGCNILPKIGGTAGGLNYEKHSISDQVKYAILAQQLKGSKTEENDTEEELIIDEGAQENRESMEGEAQPHATSLLRGKLEGMSDLYKDNSRSQLQRKASEVGKRMALKEEEERRRAEEHPEPMETEDFSKVEIKSEPKDDEEREIEGKDEAREPSQSETSESAGKVEQSTSRDCPSSERNEDLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSNNSQTSSKRKKKKKKKMKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMYCSLLFTTKSNCDRHLLRKHKNAANKIRRLRNSSSPETLEQPSNNNTTNSNNNNITSNNNNSSSSAFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRNTGPKSRAESPATSEPRNSPITTCSKQNDNSGYESQSSTNSENMDHIERMENLENPCSTEPANQDEPIPEPEAPETQQQMPETINESPDITNEDNPDNNGQEAPEQSSNPSEQQISKNTENNSTANNNDTAKARRLSPRSSPGPTDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEVLVAKGALDMDIETPEEQQQLPQPPPNSTTQHTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSMMYVGTSGDEESAPSQPPTITPRTQQQQQQQQQQSINTTSCDSRTQERMSLPTVATVATGDAAPSGLMRFNPYEKLTTLTGKMANAQQAFSEYPADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRHHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01299528;
90% Identity: iTF_01299528; iTF_00265969;
80% Identity: -