Basic Information

Insect: Campoplex nolae
Gene Symbol: -
Assembly: GCA_037893425.1
Location: JBBLXU010000432.1:984063-988262[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.37 31 5.3 0.0 5 21 503 519 502 520 0.90

2 12 6.6e-05 0.0055 17.1 2.1 1 23 528 551 528 551 0.96

3 12 0.37 31 5.3 2.8 1 23 558 581 558 581 0.93

4 12 0.012 0.98 10.0 0.9 1 23 830 852 830 852 0.98

5 12 3e-07 2.5e-05 24.5 1.8 1 23 858 881 858 881 0.97

6 12 0.032 2.7 8.6 1.9 1 23 888 911 888 911 0.94

7 12 5.3e-06 0.00045 20.6 2.2 1 23 917 939 917 939 0.98

8 12 0.024 2 9.0 0.1 3 23 946 967 944 967 0.91

9 12 2.4e-05 0.002 18.5 0.4 1 23 974 996 974 996 0.98

10 12 2.7e-05 0.0022 18.3 0.2 1 23 1000 1022 1000 1022 0.98

11 12 0.00068 0.057 13.9 0.2 1 23 1027 1049 1027 1049 0.95

12 12 2.9e-05 0.0025 18.2 0.8 1 23 1055 1078 1055 1078 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.37	31	5.3	0.0	5	21	503	519	502	520	0.90
2	12	6.6e-05	0.0055	17.1	2.1	1	23	528	551	528	551	0.96
3	12	0.37	31	5.3	2.8	1	23	558	581	558	581	0.93
4	12	0.012	0.98	10.0	0.9	1	23	830	852	830	852	0.98
5	12	3e-07	2.5e-05	24.5	1.8	1	23	858	881	858	881	0.97
6	12	0.032	2.7	8.6	1.9	1	23	888	911	888	911	0.94
7	12	5.3e-06	0.00045	20.6	2.2	1	23	917	939	917	939	0.98
8	12	0.024	2	9.0	0.1	3	23	946	967	944	967	0.91
9	12	2.4e-05	0.002	18.5	0.4	1	23	974	996	974	996	0.98
10	12	2.7e-05	0.0022	18.3	0.2	1	23	1000	1022	1000	1022	0.98
11	12	0.00068	0.057	13.9	0.2	1	23	1027	1049	1027	1049	0.95
12	12	2.9e-05	0.0025	18.2	0.8	1	23	1055	1078	1055	1078	0.98

Sequence Information

Coding Sequence: atgaaatttacgcGAATTGAACGATTGAGCAATGGGTGGTCACGTTGTGAACGAAAGAGCACGTTCGAGATCGGGCATGCCAATCATCGAAAATACCaatcatcaataaatattttaagGGTCGCTTGGTTATCGTGTTTCAATGCGAAGAGTCCAATTGAGACGAATACTCATGGCAGTGAAGTGAATCCATGCAGGGACAAATTAGAAACGACCgtcgagcagcagcagcagcagcaacaacaacaacaacaacgggAAAGTACAATTCCGAGCCCCCTGTCAACTGTGACGACGACAACAGCTGAAACGAGCATCGATATCGTTGACGAAGAATCTGTCAAATTCGAAGCCTCGTTGAAAGAGACGAATGTTTTCGATGGAGCAGAAACAGCTGAGCTGTTATCTCGAATTTCTGTGAATCctgaaaatcctgaaaaaattgtcaaagcACACGAATCTACGATTCTTAATCGtttacagaaagaaaaaatcgttgccgTCAGTCCGGTGCTCGAGACGATCGTGAATTTCTTCAAACAGAAACAATTCAGAAACAAGAAACaagttttcttcaaaatcgaaaaactaaaCGGTGGTACTTCGGAGCAGGGAACAAATTCAACCACGAATCCTCAAACGTCAACGGTTactcttgaaaaaagttttgtcgatTCCAATGTCAGAAGAGATCCGCCATCGCGGAACACGAATACAACAAGTAACAATTATTTGACGGCGAATCACatgacaaaaaacaaaactcgtACGGAGACCGCGTTATCAAATTCTGGTCCACAGATCATGGGAACGATGAATACTTTACCGATTGAGCGTCTACGAGCAGAAAGGTTCATCAAGTTGTGCAAACTATCGGGTCCAACATTAGAAAACATCGTTTCTTCCGCAACTCCTAAGAATTTGGAGAAAATACGTAAAATGCCGAAGCTTGCAGTGGATTATACgcacaagaaaaaattcgttggcaTCAGAATAATATCGGGCGAAGAGTTGCAAAAAGTGTTGGACTCTCACGTGAGTGTGTCGGAGAAACCTCGAGAAATCCAAGTTCCAGGCCCAACATTCAGAAACGTTGTTCAACCGTCTACAAAACTTGTTGGAAAATCTGGTGAACGAACAAAATCTACGAATACTCGTAAGCAGAAAGGAATAACGAACGTAAAACGAAAAGATGCTGGGGAAACAGGGTCGGTTCTGAAGTTGCGAGACGTTGTCGAGTGTTTCAACGAGAAACCTGATAACCTTGACCTGATAATTAACCAAGTTGCCACTAATTCTCTGCCGATTGATGATGTTGCAACGGAAGGTCCCGAACAAGAGctaaatttgaacaaaataatggACTCTGATCACGAGCAGCAGCCAGAGAAACCGACGAGCCCAAGAAAAGCTTCGATAGTTCATTCTTCAAGCTCGCAGACAAGTACAAATCGAAGGTCCCGAAGATTGGTCGAAATAGCTAAACAAAAGGATCACAAAGGTCCACTTTGTAAGAAAGTTTTCGTCGATCTTGGTTTATTCGATCGTCATTTGTTGATTCGGAGCAACCTGGTGCAATCTTTCGTGTGTCCAATCtgttatcgaaaattcaagtATCGTTTCGGTCTCCAGAAACACACGAGAGAGCAGCATCGCAACGTTACTCAGCTGTACGATTGTGAAATCTGCGACTTTACTACAAAACATTATCCTCGTCTTCGCGAACACTTTACGAGGCAACACGCGAATGAGTACAAATACGAGTGCAAAGAATCCGGCAAGTTAATCAAGGTTGAATCAGATTATATGACTCATTCGACAAATCACGAGAAAGGATCACGAACTTTGAACGCGTGTGAGGAACCGCATCCGGATACCAATTGCCTTTATTATTCTAGAAATACGGGCACCATGAAAATAGAGCCTTATAAGAACACGCTGTGCAATAAGAGATTGagaagtggaaaaaatttggagaatctAACAAAACGTCGGAAGCAAACTCATGAGCGACGATTGTGGTGTCACGTGCAGGAAGGAGCACCACAGAGCATCACCGATGAAAAAAGGAGCGGTCGACGGAAGAAGAGCGTGCCAGCaagaaaactcgagaaatCTGAAGAGGAAAGCAAATTGTTGGCAGGGGCTGTTAGACAAGAGCCAGGTATTGGCGAATCCGTGGAGCAACCGTTGAATCTCAAGTCTGTGCGTTCCAAACGTACAGCGGGAATGGGCAACGTCGTAGTGGAAAAGTccaatttggagaaaaatgtaccagcgagagacagaaaaaCGACGCGCGGGAGTATACcggcgaagaaaaagaagatacTTCGAGACACGAGCAGCGAGTCCGACGACGGTGAGAGTTCGCACGAAGAGTGGCAGGAGCCGGAAGAAAAACCAGTATCCAGACGACCCAGAGGATCGAAACGTCGTAAAGAGCCTAAATCAGCGAAAGAACCACGACCACCGAAGCCTGATTTTTACGAATGTGCCACCTGCGAGATGACCTTCGTAGAGCGTCGTCGCTACAGACGTCATCTAGCCAAACACAATAACACCAAGCGTTTCGAGTGCGACAAGTGCGGCCAAAAGTTCAAATATAACTCGAATCTCAAGAGTCACATACGATACGTACATGACGAGGATCCACCGGTTTACAATTGCACAATGTGCGATTTTACCACCAAAGGCCCGTACTATCTTCAAGAACATTTTACTCGCAAGCACACCGAGGAATACAAATACGAGTGCAACATTTGCGGCAAGCATTACAAGAGCGAACGCGATTACAAAGCTCACATGAATAATCACGAGGATGGACCACAAATATGCGACATATGCGGAATATCATATCCCGGCAAAGTTTCCTTATACTCCCATCGATATTACAAGCACACGGAGAAATTGAAGCCGTTCGAATGCACCATTTGTAAAAAACGACTCGTCACCGAGAAAAATCTCGAGGCGCATATGTTGCAGCACAATCAATCGTACGTTTGCGAGCTCTGCGGAATGAAATTCGGGAGGCAAGCCGGTTTATCGAAGCATCGTAAGATCCACGGGGAAAAAACTTTCCTCTGTACCGTTTGCGGACGCGCTTTCGCTAATATTACCACCCAGAGAGTCCACATGATAACGCACTCGGGGGTCAGACCGTACTCTTGTGACGTATGCGGCTCCAGTTACACCCAGAGATCTTCCCTGATGCTTCACTGGAGAAAGAAGCATCCCGAGGCAACCGAACCACCGCCTCCAGTTACACTTACCAATATATCTGATTTTTTGAAGCCCAGTGTCGACTGA
Protein Sequence: MKFTRIERLSNGWSRCERKSTFEIGHANHRKYQSSINILRVAWLSCFNAKSPIETNTHGSEVNPCRDKLETTVEQQQQQQQQQQQRESTIPSPLSTVTTTTAETSIDIVDEESVKFEASLKETNVFDGAETAELLSRISVNPENPEKIVKAHESTILNRLQKEKIVAVSPVLETIVNFFKQKQFRNKKQVFFKIEKLNGGTSEQGTNSTTNPQTSTVTLEKSFVDSNVRRDPPSRNTNTTSNNYLTANHMTKNKTRTETALSNSGPQIMGTMNTLPIERLRAERFIKLCKLSGPTLENIVSSATPKNLEKIRKMPKLAVDYTHKKKFVGIRIISGEELQKVLDSHVSVSEKPREIQVPGPTFRNVVQPSTKLVGKSGERTKSTNTRKQKGITNVKRKDAGETGSVLKLRDVVECFNEKPDNLDLIINQVATNSLPIDDVATEGPEQELNLNKIMDSDHEQQPEKPTSPRKASIVHSSSSQTSTNRRSRRLVEIAKQKDHKGPLCKKVFVDLGLFDRHLLIRSNLVQSFVCPICYRKFKYRFGLQKHTREQHRNVTQLYDCEICDFTTKHYPRLREHFTRQHANEYKYECKESGKLIKVESDYMTHSTNHEKGSRTLNACEEPHPDTNCLYYSRNTGTMKIEPYKNTLCNKRLRSGKNLENLTKRRKQTHERRLWCHVQEGAPQSITDEKRSGRRKKSVPARKLEKSEEESKLLAGAVRQEPGIGESVEQPLNLKSVRSKRTAGMGNVVVEKSNLEKNVPARDRKTTRGSIPAKKKKILRDTSSESDDGESSHEEWQEPEEKPVSRRPRGSKRRKEPKSAKEPRPPKPDFYECATCEMTFVERRRYRRHLAKHNNTKRFECDKCGQKFKYNSNLKSHIRYVHDEDPPVYNCTMCDFTTKGPYYLQEHFTRKHTEEYKYECNICGKHYKSERDYKAHMNNHEDGPQICDICGISYPGKVSLYSHRYYKHTEKLKPFECTICKKRLVTEKNLEAHMLQHNQSYVCELCGMKFGRQAGLSKHRKIHGEKTFLCTVCGRAFANITTQRVHMITHSGVRPYSCDVCGSSYTQRSSLMLHWRKKHPEATEPPPPVTLTNISDFLKPSVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00265945;
90% Identity: iTF_00265945;
80% Identity: -