Basic Information

Insect: Campoplex nolae
Gene Symbol: -
Assembly: GCA_037893425.1
Location: JBBLXU010001255.1:29808-34707[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.5e-05 0.0021 18.5 0.7 1 23 146 168 146 168 0.95

2 15 0.00092 0.077 13.5 1.1 3 23 176 196 175 196 0.99

3 15 0.00013 0.011 16.2 0.1 1 23 326 348 326 348 0.98

4 15 0.052 4.4 8.0 0.2 1 23 354 377 354 377 0.97

5 15 8.2e-05 0.0068 16.8 1.8 1 23 407 429 407 429 0.98

6 15 1.7 1.4e+02 3.2 0.0 1 23 445 467 445 467 0.86

7 15 1.2 1e+02 3.7 0.3 2 23 474 496 474 496 0.94

8 15 0.0022 0.19 12.3 2.8 2 19 504 521 504 525 0.95

9 15 0.00019 0.016 15.7 3.5 3 23 533 553 531 553 0.97

10 15 0.014 1.2 9.8 0.1 3 23 560 580 559 580 0.97

11 15 8e-06 0.00067 20.0 0.4 1 23 589 611 589 611 0.98

12 15 0.0035 0.29 11.7 0.2 3 23 619 639 617 639 0.97

13 15 0.0031 0.26 11.9 0.2 3 23 647 667 645 668 0.94

14 15 0.13 11 6.7 0.0 1 23 682 704 682 704 0.93

15 15 0.12 10 6.9 0.0 1 20 1117 1136 1117 1139 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.5e-05	0.0021	18.5	0.7	1	23	146	168	146	168	0.95
2	15	0.00092	0.077	13.5	1.1	3	23	176	196	175	196	0.99
3	15	0.00013	0.011	16.2	0.1	1	23	326	348	326	348	0.98
4	15	0.052	4.4	8.0	0.2	1	23	354	377	354	377	0.97
5	15	8.2e-05	0.0068	16.8	1.8	1	23	407	429	407	429	0.98
6	15	1.7	1.4e+02	3.2	0.0	1	23	445	467	445	467	0.86
7	15	1.2	1e+02	3.7	0.3	2	23	474	496	474	496	0.94
8	15	0.0022	0.19	12.3	2.8	2	19	504	521	504	525	0.95
9	15	0.00019	0.016	15.7	3.5	3	23	533	553	531	553	0.97
10	15	0.014	1.2	9.8	0.1	3	23	560	580	559	580	0.97
11	15	8e-06	0.00067	20.0	0.4	1	23	589	611	589	611	0.98
12	15	0.0035	0.29	11.7	0.2	3	23	619	639	617	639	0.97
13	15	0.0031	0.26	11.9	0.2	3	23	647	667	645	668	0.94
14	15	0.13	11	6.7	0.0	1	23	682	704	682	704	0.93
15	15	0.12	10	6.9	0.0	1	20	1117	1136	1117	1139	0.93

Sequence Information

Coding Sequence: ATGGATGTCTCGGGAGATTTGACGTTACAATGGGTCGAGGAGGTCGGCAATGTTATTCACGAAGAAGTAATATGCGGCTTGGAAGCAGAAATTCCTGCCACAGAGGAAGAGGTGATCGGGGCTTGCGAAGAAGTTTCCATGGAAGAAACTGTTCAAACGGCTCCGGACCAAACTCCTAGCGGCGATTCGGAGCCTCTTTTAGTCCCGCAACCTTCCGACATGGAATCAATTTATATCGTGCCCCAGGATCAGGGTCACGATTACTTGAATATTCAGGTTACCGAGGAAGTTATCACGGACAATTGGGACAGATCTGGTCCGGACGATGGgGTGGAGATACCGGAGACGAAAGTGTCTCACGATAATTTGTTGGAGTACGACGACATGGAAATCCCATTGCCGATAGATCAAGATTCGTACACGAATACGCGGCCGTATCCTTGCGACTTTTGTAGTCGGAGGTTTCGAAAGAAAGCGAATTTGATGAATCACATGGTAGCGCATCAGACGGATCGTCCACACGGTTGTAATTTGTGCGGAGCGCGTTACGTTAGAAAATGTGATTTGATGAATCATTTGAAGATCCACGCGTACGCGCCATCGCGAGATGGACTAGAGGACGACATGAATGACGATGATTCGTTGGCACAGGACGAGGAGGAAACGACGAAGGGTCGTAGAAAAAAGGTGCAATCGAGTGCACCCCGTAAACGTAAAAACAACACTGCCGCAGCGAAACGAAACAATCAAATGGAAGATTCGAGCAAAATGGTTGAAACGAGCAAACCTTTTGTTAGCAAATCTTACGATTACGTCGACGAAGATATGAGATTATTGGAAGAAATGACAAGCAGGAATACGAACGTAAGAGCGAGTGGTAATTACGCTTCGAGCTCGAGATGGACCGAGCACATGTCGAGCATTGACAGCGAACCACAAGCGCCTCGTTGGCCTGTTACCGATCCAACGAAACCCTACGTTTGTCAATACTGCGGCGTTGGTTTTGCTCGCGAAAAAGCTCTCGCCTCCCATTCTCGTATTCACGGAGGTGATAGCCCTTTCGAATGCACCAACTGTGGCGATATGTTTTGGGACATGAATACTTTGCGCGAACATATACGCGTTAAACACGGCGGCAATCAAGCCTTGACTACCCCTGCCGATGAATTTGATCCCAATGACAATACAACGTACACAGGCGACGAAAGATTCGGCGAGTTTTACTGTGATACTTGTGGCGTACCTTTTCATCGTTTGGATCTTCTCAAACGTCATCgaaaAATCCACGTCAAGCAAGAAGTAACCGAGGTCATGGATGGACCGAGTCAGCATCACGTTTGCAACGTCTGTGGCGAATGGTTCGAGGAAGCCCTTGCGCTTTTGGCTCATGCTGAATTACACGCAAGatCACCGACTCGTCGGTGTTTATTATGCGGCGAGCAATGTCGCGACGACGCCGAGGTTGCCGAACACGTTAGACAAAATCACGCAGAAGATGCGCCACCAAATACTTGCACAATGTGCGGCAAGACTTGCAAGGACAAGAGAAGTCTCTTGAAACATTCGTGGGTCCACAATGCCGACAAAACCTTTGGTTGTACAAAATGCGGCAAACGTTTTCATAGCAAAGCTAGACTACGCAGACACATGGTATCCCATCGCAACAAAATGGTAGCGTGTGACGAGTGCGGTGAAGAATTTCCAGACGGTAGAGCACTCGTGAGCCATCGTCATTCGCACAACAAAGATCTCGGTGGCCGATCGTTTCCGTGTCGCGAATGCGGTAAAACGTTTGGTAGTCGAAGCTCTCAACAGATTCATATTCGTATACACACCGGGGAACGACCGTACGGCTGTAGATTCTGTTGGAAGGCTTTCGCTGACGGTGGCACATTGAGGAAACATGAGCGCATACACACCGGTGAAAAGCCTTACGGTTGCGCGATATGCCCTCGAGCCTTCAATCAACGGGTTGTTCTCCGGGAGCACGTGAGAGCCCATCACTCAGGTCCAGATCCCAAGTGTCACGGTAGCATGACGCCGTATCTGTGTAAAGTGTGTGGCGATTCTTACGCGACGTCGGAAGAAATAGTAGCGCATATAGTGCAACACTGCGACGACAACACGGCGTTGCGTCGTCAGCCGCAGATAGGACCACGAAAATATAAGAGGAGACGTAAGCTCAAGCAGCACGACGTACCGAGTTTATCTTTGCCGGTGCGAGGAACGATAAATGAGAATTTCAACGTGCTCGAGGCCGCGTCGGACTCGGACGACAATACGAAACGCAAGCTTGGTCGAAAGAACAAGCAACGTTCGAGCGTCGAGGACGGTTATCAAAATGTTCTAAAGAGCTTCGAATCATCGTtgcaaaatataaattcgatcGTGAGtaatacaaaattgaagcCTTCTAAgtcgaaaatatcgaagaaaaatgcaaagaaCAAAGGAAGTCTGagcgaggagaaaaagagtgaaactCAAACGTCAGGACAACCGGGACGTCCGAAAATGATTCACACCCAAAAGACCCGAGTCCCCGTCGAAGTGGGTACGGACGGTGTGAAAAAAggtcaaaaaacgaaaacccTGGTTACGAGAACCCCCAAAGTAATGCCGAACGAGCACAAAATCGGTTTGTTCGCCGGTGGCGAGAGAAATCGTCCGAGAACAAAGAACGTGAGTTATCACGTCGAGGGTAAATCGCAAATAACACCAGCTACATTCCCGAAGCAAAAGGAAGAGGATTCGAGCCTCGTTGCGAAAGAGAACGACCCGAGCGAGGAACAGTCGTTGACAACGAGCGAGGAATCACCGATGATAAAATCCTCCCAACAAACCGGATCGAAACGTTTGGCCGCTAACAATCACGCGAATAGCAACAACAACGGTAACGTTTTAGGAATCAACGATAAAACGGAAAACTCTATGACACCGACGACTAAAAAGCGTGCCGCTGTCGCCAAGAGagtcaagaaaataaaacaagtttTGATAAAACAAGAACCGATCGAGCACAGCGAGGATAACGACGTCGAATTTCGCGACAACAATAATTCCGGTGACATCGTTAATTCTACGAGTTTTAGTAACGAACCCCCGATTACCGGTGACAATTCGCTCTTCGAGCCAAGAATATTGAACGCTCGCGAAGAATCCATATTACCCGATCTCGACGACGACATTCAACACCGACGAGAACCTGTCGTTAAAcctggaaaaattaaaatcagcCTCCAAGTCGAGGCTGCCGCACCAAGAATTCATATTCAATCTGCCCCACGCGGTGTCACGATAACCCCCGCCGAGGACATACCCGAAACCATTATTCCCGATACCCTCGAGTACACGTGTGAAATGTGCGCCGCTGTTTTCGGCAGCCGGGCCGAATTACTCATACACGTACCTATACACATTTGA
Protein Sequence: MDVSGDLTLQWVEEVGNVIHEEVICGLEAEIPATEEEVIGACEEVSMEETVQTAPDQTPSGDSEPLLVPQPSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLEDDMNDDDSLAQDEEETTKGRRKKVQSSAPRKRKNNTAAAKRNNQMEDSSKMVETSKPFVSKSYDYVDEDMRLLEEMTSRNTNVRASGNYASSSRWTEHMSSIDSEPQAPRWPVTDPTKPYVCQYCGVGFAREKALASHSRIHGGDSPFECTNCGDMFWDMNTLREHIRVKHGGNQALTTPADEFDPNDNTTYTGDERFGEFYCDTCGVPFHRLDLLKRHRKIHVKQEVTEVMDGPSQHHVCNVCGEWFEEALALLAHAELHARSPTRRCLLCGEQCRDDAEVAEHVRQNHAEDAPPNTCTMCGKTCKDKRSLLKHSWVHNADKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKDLGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSMTPYLCKVCGDSYATSEEIVAHIVQHCDDNTALRRQPQIGPRKYKRRRKLKQHDVPSLSLPVRGTINENFNVLEAASDSDDNTKRKLGRKNKQRSSVEDGYQNVLKSFESSLQNINSIVSNTKLKPSKSKISKKNAKNKGSLSEEKKSETQTSGQPGRPKMIHTQKTRVPVEVGTDGVKKGQKTKTLVTRTPKVMPNEHKIGLFAGGERNRPRTKNVSYHVEGKSQITPATFPKQKEEDSSLVAKENDPSEEQSLTTSEESPMIKSSQQTGSKRLAANNHANSNNNGNVLGINDKTENSMTPTTKKRAAVAKRVKKIKQVLIKQEPIEHSEDNDVEFRDNNNSGDIVNSTSFSNEPPITGDNSLFEPRILNAREESILPDLDDDIQHRREPVVKPGKIKISLQVEAAAPRIHIQSAPRGVTITPAEDIPETIIPDTLEYTCEMCAAVFGSRAELLIHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01057843;
90% Identity: iTF_00265933;
80% Identity: -